RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 CLCN5P51795 746 aa18.05■□□□□ 0.48
CDC42BPB-203ENST00000558867 JAKMIP3Q5VZ66 844 aa18.05■□□□□ 0.48
CDC42BPB-203ENST00000558867 TYW1BQ6NUM6 668 aa18.05■□□□□ 0.48
CDC42BPB-203ENST00000558867 PPFIBP1Q86W92 1011 aa18.05■□□□□ 0.48
CDC42BPB-203ENST00000558867 ZSWIM6Q9HCJ5 1215 aa18.05■□□□□ 0.48
CDC42BPB-203ENST00000558867 STK39Q9UEW8 545 aa18.05■□□□□ 0.48
CDC42BPB-203ENST00000558867 CCDC196A0A1B0GTZ2 297 aa18.04■□□□□ 0.48
CDC42BPB-203ENST00000558867 SPDYE4A6NLX3 237 aa18.04■□□□□ 0.48
CDC42BPB-203ENST00000558867 WDR64B1ANS9 1081 aa18.04■□□□□ 0.48
CDC42BPB-203ENST00000558867 PBX3P40426 434 aa18.04■□□□□ 0.48
CDC42BPB-203ENST00000558867 METAP2P50579 478 aaKnown RBP eCLIP18.04■□□□□ 0.48
CDC42BPB-203ENST00000558867 POLGP54098 1239 aaPredicted RBP18.04■□□□□ 0.48
CDC42BPB-203ENST00000558867 BCAR1P56945 870 aa18.04■□□□□ 0.48
CDC42BPB-203ENST00000558867 RARS2Q5T160 578 aaKnown RBP18.04■□□□□ 0.48
CDC42BPB-203ENST00000558867 KIAA1841Q6NSI8 718 aa18.04■□□□□ 0.48
CDC42BPB-203ENST00000558867 HELQQ8TDG4 1101 aa18.04■□□□□ 0.48
CDC42BPB-203ENST00000558867 NLRP7Q8WX94 980 aa18.04■□□□□ 0.48
CDC42BPB-203ENST00000558867 ADAMTS10Q9H324 1103 aa18.04■□□□□ 0.48
CDC42BPB-203ENST00000558867 C6orf50Q9HD87 102 aa18.04■□□□□ 0.48
CDC42BPB-203ENST00000558867 CHST12Q9NRB3 414 aa18.04■□□□□ 0.48
CDC42BPB-203ENST00000558867 CHMP5Q9NZZ3 219 aa18.04■□□□□ 0.48
CDC42BPB-203ENST00000558867 SPTBN4Q9H254 2564 aa18.03■□□□□ 0.48
CDC42BPB-203ENST00000558867 IGLV3-22A0A075B6J6 115 aa18.03■□□□□ 0.48
CDC42BPB-203ENST00000558867 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.03■□□□□ 0.48
CDC42BPB-203ENST00000558867 PRR23AA6NEV1 266 aa18.03■□□□□ 0.48
CDC42BPB-203ENST00000558867 GOLGA8AA7E2F4 631 aa18.03■□□□□ 0.48
CDC42BPB-203ENST00000558867 GOLGA8BA8MQT2 603 aa18.03■□□□□ 0.48
CDC42BPB-203ENST00000558867 DARSP14868 501 aaKnown RBP18.03■□□□□ 0.48
CDC42BPB-203ENST00000558867 GNA11P29992 359 aa18.03■□□□□ 0.48
CDC42BPB-203ENST00000558867 CUL4AQ13619 759 aa18.03■□□□□ 0.48
CDC42BPB-203ENST00000558867 CABP7Q86V35 215 aa18.03■□□□□ 0.48
CDC42BPB-203ENST00000558867 VPS52Q8N1B4 723 aa18.03■□□□□ 0.48
CDC42BPB-203ENST00000558867 NKD2Q969F2 451 aaPredicted RBP18.03■□□□□ 0.48
CDC42BPB-203ENST00000558867 GCOM2Q9BZD3 368 aaPredicted RBP18.03■□□□□ 0.48
CDC42BPB-203ENST00000558867 INO80BQ9C086 356 aaPredicted RBP18.03■□□□□ 0.48
CDC42BPB-203ENST00000558867 CYP26B1Q9NR63 512 aa18.03■□□□□ 0.48
CDC42BPB-203ENST00000558867 RNF19AQ9NV58 838 aa18.03■□□□□ 0.48
CDC42BPB-203ENST00000558867 LIMD1Q9UGP4 676 aa18.03■□□□□ 0.48
CDC42BPB-203ENST00000558867 RIF1Q5UIP0 2472 aaKnown RBP18.03■□□□□ 0.48
CDC42BPB-203ENST00000558867 MYO10Q9HD67 2058 aa18.02■□□□□ 0.48
CDC42BPB-203ENST00000558867 OATP04181 439 aa18.02■□□□□ 0.48
CDC42BPB-203ENST00000558867 DNM2P50570 870 aa18.02■□□□□ 0.48
CDC42BPB-203ENST00000558867 RCAN1P53805 252 aa18.02■□□□□ 0.48
CDC42BPB-203ENST00000558867 FGD1P98174 961 aa18.02■□□□□ 0.48
CDC42BPB-203ENST00000558867 TBC1D8BQ0IIM8 1120 aa18.02■□□□□ 0.48
CDC42BPB-203ENST00000558867 CLLU1OSQ5K130 101 aa18.02■□□□□ 0.48
CDC42BPB-203ENST00000558867 OTOP3Q7RTS5 596 aa18.02■□□□□ 0.48
CDC42BPB-203ENST00000558867 ASCL5Q7RTU5 278 aa18.02■□□□□ 0.48
CDC42BPB-203ENST00000558867 REXO1Q8N1G1 1221 aaKnown RBP18.02■□□□□ 0.48
CDC42BPB-203ENST00000558867 LRRC71Q8N4P6 559 aa18.02■□□□□ 0.48
CDC42BPB-203ENST00000558867 TMEM105Q8N8V8 129 aa18.02■□□□□ 0.48
CDC42BPB-203ENST00000558867 BICD2Q8TD16 824 aa18.02■□□□□ 0.48
CDC42BPB-203ENST00000558867 INTS4Q96HW7 963 aaKnown RBP18.02■□□□□ 0.48
CDC42BPB-203ENST00000558867 NAP1L2Q9ULW6 460 aaPredicted RBP18.02■□□□□ 0.48
CDC42BPB-203ENST00000558867 IRAK3Q9Y616 596 aa18.02■□□□□ 0.48
CDC42BPB-203ENST00000558867 ESYT2A0FGR8 921 aa18.01■□□□□ 0.47
CDC42BPB-203ENST00000558867 ZC3H11AO75152 810 aaKnown RBP eCLIP18.01■□□□□ 0.47
CDC42BPB-203ENST00000558867 SFPQP23246 707 aaKnown RBP eCLIP18.01■□□□□ 0.47
CDC42BPB-203ENST00000558867 SFNP31947 248 aa18.01■□□□□ 0.47
CDC42BPB-203ENST00000558867 GPC3P51654 580 aa18.01■□□□□ 0.47
CDC42BPB-203ENST00000558867 RNASELQ05823 741 aaKnown RBP18.01■□□□□ 0.47
CDC42BPB-203ENST00000558867 FUT2Q10981 343 aa18.01■□□□□ 0.47
CDC42BPB-203ENST00000558867 PFKFB3Q16875 520 aaPredicted RBP18.01■□□□□ 0.47
CDC42BPB-203ENST00000558867 PRR16Q569H4 304 aa18.01■□□□□ 0.47
CDC42BPB-203ENST00000558867 GLB1LQ6UWU2 654 aa18.01■□□□□ 0.47
CDC42BPB-203ENST00000558867 RUFY3Q7L099 469 aa18.01■□□□□ 0.47
CDC42BPB-203ENST00000558867 DHX32Q7L7V1 743 aaKnown RBP18.01■□□□□ 0.47
CDC42BPB-203ENST00000558867 ERMP1Q7Z2K6 904 aa18.01■□□□□ 0.47
CDC42BPB-203ENST00000558867 DDX53Q86TM3 631 aaKnown RBP18.01■□□□□ 0.47
CDC42BPB-203ENST00000558867 DISC1Q9NRI5 854 aa18.01■□□□□ 0.47
CDC42BPB-203ENST00000558867 CYP46A1Q9Y6A2 500 aa18.01■□□□□ 0.47
CDC42BPB-203ENST00000558867 NT5C1B-RDH14C9J2C7 533 aa18■□□□□ 0.47
CDC42BPB-203ENST00000558867 ASGR2P07307 311 aa18■□□□□ 0.47
CDC42BPB-203ENST00000558867 CTSAP10619 480 aa18■□□□□ 0.47
CDC42BPB-203ENST00000558867 JAK3P52333 1124 aa18■□□□□ 0.47
CDC42BPB-203ENST00000558867 AKAP17AQ02040 695 aaKnown RBP18■□□□□ 0.47
CDC42BPB-203ENST00000558867 ELMSAN1Q6PJG2 1045 aa18■□□□□ 0.47
CDC42BPB-203ENST00000558867 CCDC149Q6ZUS6 474 aa18■□□□□ 0.47
CDC42BPB-203ENST00000558867 ZNF598Q86UK7 904 aaKnown RBP18■□□□□ 0.47
CDC42BPB-203ENST00000558867 LINC01465Q8N7H1 131 aa18■□□□□ 0.47
CDC42BPB-203ENST00000558867 FLCNQ8NFG4 579 aa18■□□□□ 0.47
CDC42BPB-203ENST00000558867 RTP3Q9BQQ7 232 aa18■□□□□ 0.47
CDC42BPB-203ENST00000558867 ANP32EQ9BTT0 268 aa18■□□□□ 0.47
CDC42BPB-203ENST00000558867 EMILIN2Q9BXX0 1053 aa18■□□□□ 0.47
CDC42BPB-203ENST00000558867 ZMYND12Q9H0C1 365 aa18■□□□□ 0.47
CDC42BPB-203ENST00000558867 ZBP1Q9H171 429 aa18■□□□□ 0.47
CDC42BPB-203ENST00000558867 SLKQ9H2G2 1235 aaPredicted RBP18■□□□□ 0.47
CDC42BPB-203ENST00000558867 CDH22Q9UJ99 828 aa18■□□□□ 0.47
CDC42BPB-203ENST00000558867 FAM186AA6NE01 2351 aa17.99■□□□□ 0.47
CDC42BPB-203ENST00000558867 KLF18A0A0U1RQI7 1052 aa17.99■□□□□ 0.47
CDC42BPB-203ENST00000558867 HMGB1P09429 215 aaKnown RBP17.99■□□□□ 0.47
CDC42BPB-203ENST00000558867 WEE2P0C1S8 567 aa17.99■□□□□ 0.47
CDC42BPB-203ENST00000558867 PRKCEQ02156 737 aa17.99■□□□□ 0.47
CDC42BPB-203ENST00000558867 TDGQ13569 410 aa17.99■□□□□ 0.47
CDC42BPB-203ENST00000558867 ADCK5Q3MIX3 580 aa17.99■□□□□ 0.47
CDC42BPB-203ENST00000558867 TWF2Q6IBS0 349 aaKnown RBP17.99■□□□□ 0.47
CDC42BPB-203ENST00000558867 C12orf76Q8N812 135 aaPredicted RBP17.99■□□□□ 0.47
CDC42BPB-203ENST00000558867 CRYGNQ8WXF5 182 aa17.99■□□□□ 0.47
CDC42BPB-203ENST00000558867 PGBD4Q96DM1 585 aa17.99■□□□□ 0.47
CDC42BPB-203ENST00000558867 IGSF21Q96ID5 467 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms