RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 NOP56O00567 594 aaKnown RBP11.15□□□□□ -0.62
SPG11-212ENST00000558790 CAND2O75155 1236 aa11.15□□□□□ -0.62
SPG11-212ENST00000558790 TGFB3P10600 412 aa11.15□□□□□ -0.62
SPG11-212ENST00000558790 IRS1P35568 1242 aa11.15□□□□□ -0.62
SPG11-212ENST00000558790 MRPS9P82933 396 aaKnown RBP11.15□□□□□ -0.62
SPG11-212ENST00000558790 GPM6BQ13491 265 aa11.15□□□□□ -0.62
SPG11-212ENST00000558790 GRM4Q14833 912 aa11.15□□□□□ -0.62
SPG11-212ENST00000558790 COL19A1Q14993 1142 aa11.15□□□□□ -0.62
SPG11-212ENST00000558790 DBN1Q16643 649 aa11.15□□□□□ -0.62
SPG11-212ENST00000558790 TMEM192Q8IY95 271 aa11.15□□□□□ -0.62
SPG11-212ENST00000558790 TOP1MTQ969P6 601 aa11.15□□□□□ -0.62
SPG11-212ENST00000558790 PABPC5Q96DU9 382 aaKnown RBP11.15□□□□□ -0.62
SPG11-212ENST00000558790 PIGSQ96S52 555 aa11.15□□□□□ -0.62
SPG11-212ENST00000558790 IFIH1Q9BYX4 1025 aaKnown RBP11.15□□□□□ -0.62
SPG11-212ENST00000558790 CRISPLD1Q9H336 500 aa11.15□□□□□ -0.62
SPG11-212ENST00000558790 RNPEPQ9H4A4 650 aa11.15□□□□□ -0.62
SPG11-212ENST00000558790 CTNNA3Q9UI47 895 aa11.15□□□□□ -0.62
SPG11-212ENST00000558790 TELO2Q9Y4R8 837 aa11.15□□□□□ -0.62
SPG11-212ENST00000558790 MYH9P35579 1960 aaKnown RBP11.15□□□□□ -0.62
SPG11-212ENST00000558790 USP24Q9UPU5 2620 aa11.14□□□□□ -0.63
SPG11-212ENST00000558790 GCOM1H8Y6P7 765 aaPredicted RBP11.14□□□□□ -0.63
SPG11-212ENST00000558790 HIP1O00291 1037 aa11.14□□□□□ -0.63
SPG11-212ENST00000558790 CYTH3O43739 400 aa11.14□□□□□ -0.63
SPG11-212ENST00000558790 LINC00271P0C7V0 271 aa11.14□□□□□ -0.63
SPG11-212ENST00000558790 POLR2MP0CAP2 368 aa11.14□□□□□ -0.63
SPG11-212ENST00000558790 CTNNB1P35222 781 aa11.14□□□□□ -0.63
SPG11-212ENST00000558790 METTL7BQ6UX53 244 aa11.14□□□□□ -0.63
SPG11-212ENST00000558790 EP400NLQ6ZTU2 488 aa11.14□□□□□ -0.63
SPG11-212ENST00000558790 CYFIP1Q7L576 1253 aa11.14□□□□□ -0.63
SPG11-212ENST00000558790 ERMP1Q7Z2K6 904 aa11.14□□□□□ -0.63
SPG11-212ENST00000558790 CHD1LQ86WJ1 897 aa11.14□□□□□ -0.63
SPG11-212ENST00000558790 SAMD3Q8N6K7 520 aa11.14□□□□□ -0.63
SPG11-212ENST00000558790 HELQQ8TDG4 1101 aa11.14□□□□□ -0.63
SPG11-212ENST00000558790 LMBR1Q8WVP7 490 aa11.14□□□□□ -0.63
SPG11-212ENST00000558790 SUSD3Q96L08 255 aa11.14□□□□□ -0.63
SPG11-212ENST00000558790 INPP4AQ96PE3 977 aaPredicted RBP11.14□□□□□ -0.63
SPG11-212ENST00000558790 GPR20Q99678 358 aa11.14□□□□□ -0.63
SPG11-212ENST00000558790 NSUN3Q9H649 340 aaKnown RBP11.14□□□□□ -0.63
SPG11-212ENST00000558790 SETD4Q9NVD3 440 aa11.14□□□□□ -0.63
SPG11-212ENST00000558790 SUPT16HQ9Y5B9 1047 aaKnown RBP11.14□□□□□ -0.63
SPG11-212ENST00000558790 ADGRA3Q8IWK6 1321 aa11.13□□□□□ -0.63
SPG11-212ENST00000558790 CDC14CA4D256 554 aa11.13□□□□□ -0.63
SPG11-212ENST00000558790 ICAM3P32942 547 aa11.13□□□□□ -0.63
SPG11-212ENST00000558790 ADAM17P78536 824 aa11.13□□□□□ -0.63
SPG11-212ENST00000558790 ARHGAP4P98171 946 aa11.13□□□□□ -0.63
SPG11-212ENST00000558790 NUCB1Q02818 461 aa11.13□□□□□ -0.63
SPG11-212ENST00000558790 C11orf91Q3C1V1 193 aa11.13□□□□□ -0.63
SPG11-212ENST00000558790 GNPTABQ3T906 1256 aa11.13□□□□□ -0.63
SPG11-212ENST00000558790 RPAINQ86UA6 219 aa11.13□□□□□ -0.63
SPG11-212ENST00000558790 APBB2Q92870 758 aa11.13□□□□□ -0.63
SPG11-212ENST00000558790 ZNF837Q96EG3 531 aaPredicted RBP11.13□□□□□ -0.63
SPG11-212ENST00000558790 USP26Q9BXU7 913 aa11.13□□□□□ -0.63
SPG11-212ENST00000558790 NUCKS1Q9H1E3 243 aaKnown RBP11.13□□□□□ -0.63
SPG11-212ENST00000558790 RIOX1Q9H6W3 641 aa11.13□□□□□ -0.63
SPG11-212ENST00000558790 RC3H2Q9HBD1 1191 aaKnown RBP11.13□□□□□ -0.63
SPG11-212ENST00000558790 NEUROD4Q9HD90 331 aa11.13□□□□□ -0.63
SPG11-212ENST00000558790 CLDND1Q9NY35 253 aa11.13□□□□□ -0.63
SPG11-212ENST00000558790 ZNF215Q9UL58 517 aaPredicted RBP11.13□□□□□ -0.63
SPG11-212ENST00000558790 ANKRD11Q6UB99 2663 aaPredicted RBP11.13□□□□□ -0.63
SPG11-212ENST00000558790 FIBPO43427 364 aa11.12□□□□□ -0.63
SPG11-212ENST00000558790 CSPG5O95196 566 aa11.12□□□□□ -0.63
SPG11-212ENST00000558790 GHRP10912 638 aa11.12□□□□□ -0.63
SPG11-212ENST00000558790 LTBRP36941 435 aa11.12□□□□□ -0.63
SPG11-212ENST00000558790 VCPP55072 806 aaKnown RBP11.12□□□□□ -0.63
SPG11-212ENST00000558790 SP4Q02446 784 aa11.12□□□□□ -0.63
SPG11-212ENST00000558790 NEDD9Q14511 834 aa11.12□□□□□ -0.63
SPG11-212ENST00000558790 CLUL1Q15846 466 aa11.12□□□□□ -0.63
SPG11-212ENST00000558790 UTP14CQ5TAP6 766 aaKnown RBP11.12□□□□□ -0.63
SPG11-212ENST00000558790 RUFY4Q6ZNE9 571 aa11.12□□□□□ -0.63
SPG11-212ENST00000558790 SETXQ7Z333 2677 aaKnown RBP11.12□□□□□ -0.63
SPG11-212ENST00000558790 SPTBN2O15020 2390 aa11.12□□□□□ -0.63
SPG11-212ENST00000558790 PNMA6FA0A0J9YX94 578 aa11.11□□□□□ -0.63
SPG11-212ENST00000558790 C5orf67F2Z3F1 127 aa11.11□□□□□ -0.63
SPG11-212ENST00000558790 GRM6O15303 877 aa11.11□□□□□ -0.63
SPG11-212ENST00000558790 TBX10O75333 385 aa11.11□□□□□ -0.63
SPG11-212ENST00000558790 STAM2O75886 525 aa11.11□□□□□ -0.63
SPG11-212ENST00000558790 IGHDP01880 384 aa11.11□□□□□ -0.63
SPG11-212ENST00000558790 CHRNA1P02708 482 aa11.11□□□□□ -0.63
SPG11-212ENST00000558790 GNAT1P11488 350 aa11.11□□□□□ -0.63
SPG11-212ENST00000558790 MPSTP25325 297 aa11.11□□□□□ -0.63
SPG11-212ENST00000558790 ID4P47928 161 aa11.11□□□□□ -0.63
SPG11-212ENST00000558790 DLX2Q07687 328 aaPredicted RBP11.11□□□□□ -0.63
SPG11-212ENST00000558790 MGAT3Q09327 533 aa11.11□□□□□ -0.63
SPG11-212ENST00000558790 TRAF1Q13077 416 aa11.11□□□□□ -0.63
SPG11-212ENST00000558790 EFHC2Q5JST6 749 aa11.11□□□□□ -0.63
SPG11-212ENST00000558790 ADHFE1Q8IWW8 467 aa11.11□□□□□ -0.63
SPG11-212ENST00000558790 TRIM22Q8IYM9 498 aa11.11□□□□□ -0.63
SPG11-212ENST00000558790 FIBCD1Q8N539 461 aa11.11□□□□□ -0.63
SPG11-212ENST00000558790 PIBF1Q8WXW3 757 aa11.11□□□□□ -0.63
SPG11-212ENST00000558790 ATOH1Q92858 354 aaPredicted RBP11.11□□□□□ -0.63
SPG11-212ENST00000558790 IL17RAQ96F46 866 aa11.11□□□□□ -0.63
SPG11-212ENST00000558790 IFT43Q96FT9 208 aa11.11□□□□□ -0.63
SPG11-212ENST00000558790 CNTNAP3BQ96NU0 1288 aa11.11□□□□□ -0.63
SPG11-212ENST00000558790 CNTNAP3Q9BZ76 1288 aa11.11□□□□□ -0.63
SPG11-212ENST00000558790 RTEL1Q9NZ71 1219 aa11.11□□□□□ -0.63
SPG11-212ENST00000558790 NXF1Q9UBU9 619 aaKnown RBP11.11□□□□□ -0.63
SPG11-212ENST00000558790 PRKAG3Q9UGI9 489 aa11.11□□□□□ -0.63
SPG11-212ENST00000558790 FAM50BQ9Y247 325 aa11.11□□□□□ -0.63
SPG11-212ENST00000558790 TAF6LQ9Y6J9 622 aa11.11□□□□□ -0.63
SPG11-212ENST00000558790 EP300Q09472 2414 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms