RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 CRACR2AQ9BSW2 395 aa8.82□□□□□ -1
RTF1-205ENST00000558298 UBE2OQ9C0C9 1292 aaKnown RBP8.82□□□□□ -1
RTF1-205ENST00000558298 PDE11AQ9HCR9 933 aa8.82□□□□□ -1
RTF1-205ENST00000558298 BATF3Q9NR55 127 aa8.82□□□□□ -1
RTF1-205ENST00000558298 ERAP1Q9NZ08 941 aa8.82□□□□□ -1
RTF1-205ENST00000558298 GTF2IRD1Q9UHL9 959 aa8.82□□□□□ -1
RTF1-205ENST00000558298 ARID2Q68CP9 1835 aa8.82□□□□□ -1
RTF1-205ENST00000558298 GSTTP1A0A1W2PQM5 241 aa8.81□□□□□ -1
RTF1-205ENST00000558298 DCDC2CA8MYV0 355 aa8.81□□□□□ -1
RTF1-205ENST00000558298 WDR64B1ANS9 1081 aa8.81□□□□□ -1
RTF1-205ENST00000558298 BTBD18B2RXH4 712 aa8.81□□□□□ -1
RTF1-205ENST00000558298 H3BRB1 525 aa8.81□□□□□ -1
RTF1-205ENST00000558298 TLR3O15455 904 aaKnown RBP8.81□□□□□ -1
RTF1-205ENST00000558298 MSH4O15457 936 aa8.81□□□□□ -1
RTF1-205ENST00000558298 B4GALT4O60513 344 aa8.81□□□□□ -1
RTF1-205ENST00000558298 PARNO95453 639 aaKnown RBP8.81□□□□□ -1
RTF1-205ENST00000558298 TIMP1P01033 207 aa8.81□□□□□ -1
RTF1-205ENST00000558298 ARP10275 920 aa8.81□□□□□ -1
RTF1-205ENST00000558298 SLC8A1P32418 973 aa8.81□□□□□ -1
RTF1-205ENST00000558298 ZNF76P36508 570 aa8.81□□□□□ -1
RTF1-205ENST00000558298 JAK3P52333 1124 aa8.81□□□□□ -1
RTF1-205ENST00000558298 ACTR2P61160 394 aa8.81□□□□□ -1
RTF1-205ENST00000558298 PSMC6P62333 389 aa8.81□□□□□ -1
RTF1-205ENST00000558298 ADAM17P78536 824 aa8.81□□□□□ -1
RTF1-205ENST00000558298 NR5A1Q13285 461 aa8.81□□□□□ -1
RTF1-205ENST00000558298 TRIM14Q14142 442 aa8.81□□□□□ -1
RTF1-205ENST00000558298 MFSD10Q14728 455 aa8.81□□□□□ -1
RTF1-205ENST00000558298 PRR16Q569H4 304 aa8.81□□□□□ -1
RTF1-205ENST00000558298 C9orf50Q5SZB4 431 aa8.81□□□□□ -1
RTF1-205ENST00000558298 SPECC1LQ69YQ0 1117 aa8.81□□□□□ -1
RTF1-205ENST00000558298 MFSD5Q6N075 450 aa8.81□□□□□ -1
RTF1-205ENST00000558298 KANK3Q6NY19 840 aa8.81□□□□□ -1
RTF1-205ENST00000558298 ABHD15Q6UXT9 468 aa8.81□□□□□ -1
RTF1-205ENST00000558298 C16orf59Q7L2K0 433 aa8.81□□□□□ -1
RTF1-205ENST00000558298 NOSTRINQ8IVI9 506 aa8.81□□□□□ -1
RTF1-205ENST00000558298 SLFN12Q8IYM2 578 aa8.81□□□□□ -1
RTF1-205ENST00000558298 TRIML1Q8N9V2 468 aa8.81□□□□□ -1
RTF1-205ENST00000558298 CNNM3Q8NE01 707 aa8.81□□□□□ -1
RTF1-205ENST00000558298 CAGE1Q8TC20 777 aa8.81□□□□□ -1
RTF1-205ENST00000558298 OXER1Q8TDS5 423 aa8.81□□□□□ -1
RTF1-205ENST00000558298 LRCH3Q96II8 777 aa8.81□□□□□ -1
RTF1-205ENST00000558298 ZNF577Q9BSK1 485 aa8.81□□□□□ -1
RTF1-205ENST00000558298 NOC4LQ9BVI4 516 aaKnown RBP8.81□□□□□ -1
RTF1-205ENST00000558298 SMARCAD1Q9H4L7 1026 aa8.81□□□□□ -1
RTF1-205ENST00000558298 TUT1Q9H6E5 874 aaKnown RBP8.81□□□□□ -1
RTF1-205ENST00000558298 GJB4Q9NTQ9 266 aa8.81□□□□□ -1
RTF1-205ENST00000558298 DDX25Q9UHL0 483 aaKnown RBP8.81□□□□□ -1
RTF1-205ENST00000558298 COL1A2P08123 1366 aa8.81□□□□□ -1
RTF1-205ENST00000558298 UMODL1Q5DID0 1318 aa8.8□□□□□ -1
RTF1-205ENST00000558298 NRCAMQ92823 1304 aa8.8□□□□□ -1
RTF1-205ENST00000558298 CHD9Q3L8U1 2897 aa8.8□□□□□ -1
RTF1-205ENST00000558298 SIP14410 1827 aa8.8□□□□□ -1
RTF1-205ENST00000558298 SCN5AQ14524 2016 aa8.8□□□□□ -1
RTF1-205ENST00000558298 MBLAC1A4D2B0 266 aaPredicted RBP8.8□□□□□ -1
RTF1-205ENST00000558298 VWA3AA6NCI4 1184 aa8.8□□□□□ -1
RTF1-205ENST00000558298 LAD1O00515 517 aa8.8□□□□□ -1
RTF1-205ENST00000558298 FSBPO95073 299 aa8.8□□□□□ -1
RTF1-205ENST00000558298 TDP2O95551 362 aa8.8□□□□□ -1
RTF1-205ENST00000558298 CCNE2O96020 404 aa8.8□□□□□ -1
RTF1-205ENST00000558298 EZRP15311 586 aaKnown RBP8.8□□□□□ -1
RTF1-205ENST00000558298 CMA1P23946 247 aa8.8□□□□□ -1
RTF1-205ENST00000558298 TCF7P36402 384 aaPredicted RBP8.8□□□□□ -1
RTF1-205ENST00000558298 PSEN2P49810 448 aa8.8□□□□□ -1
RTF1-205ENST00000558298 SPIRE1Q08AE8 756 aa8.8□□□□□ -1
RTF1-205ENST00000558298 CASP8Q14790 479 aa8.8□□□□□ -1
RTF1-205ENST00000558298 INF2Q27J81 1249 aa8.8□□□□□ -1
RTF1-205ENST00000558298 KIAA0753Q2KHM9 967 aa8.8□□□□□ -1
RTF1-205ENST00000558298 EARS2Q5JPH6 523 aaKnown RBP8.8□□□□□ -1
RTF1-205ENST00000558298 PIK3AP1Q6ZUJ8 805 aa8.8□□□□□ -1
RTF1-205ENST00000558298 CNGA4Q8IV77 575 aa8.8□□□□□ -1
RTF1-205ENST00000558298 APLFQ8IW19 511 aaPredicted RBP8.8□□□□□ -1
RTF1-205ENST00000558298 MTMR9Q96QG7 549 aa8.8□□□□□ -1
RTF1-205ENST00000558298 PCYT2Q99447 389 aa8.8□□□□□ -1
RTF1-205ENST00000558298 WNT8AQ9H1J5 351 aa8.8□□□□□ -1
RTF1-205ENST00000558298 BCAS3Q9H6U6 928 aa8.8□□□□□ -1
RTF1-205ENST00000558298 FAM204AQ9H8W3 233 aa8.8□□□□□ -1
RTF1-205ENST00000558298 ACTR5Q9H9F9 607 aaPredicted RBP8.8□□□□□ -1
RTF1-205ENST00000558298 PRDM5Q9NQX1 630 aaPredicted RBP8.8□□□□□ -1
RTF1-205ENST00000558298 TMEM39AQ9NV64 488 aa8.8□□□□□ -1
RTF1-205ENST00000558298 PRKAG2Q9UGJ0 569 aa8.8□□□□□ -1
RTF1-205ENST00000558298 LCMT1Q9UIC8 334 aa8.8□□□□□ -1
RTF1-205ENST00000558298 VAV3Q9UKW4 847 aa8.8□□□□□ -1
RTF1-205ENST00000558298 PPME1Q9Y570 386 aa8.8□□□□□ -1
RTF1-205ENST00000558298 MAFBQ9Y5Q3 323 aaPredicted RBP8.8□□□□□ -1
RTF1-205ENST00000558298 PTPRSQ13332 1948 aa8.8□□□□□ -1
RTF1-205ENST00000558298 GBF1Q92538 1859 aa8.79□□□□□ -1
RTF1-205ENST00000558298 COL6A3P12111 3177 aa8.79□□□□□ -1
RTF1-205ENST00000558298 H0YHG0 523 aa8.79□□□□□ -1
RTF1-205ENST00000558298 SLC37A4O43826 429 aa8.79□□□□□ -1
RTF1-205ENST00000558298 SEC31AO94979 1220 aaKnown RBP8.79□□□□□ -1
RTF1-205ENST00000558298 PFKMP08237 780 aa8.79□□□□□ -1
RTF1-205ENST00000558298 MYL3P08590 195 aa8.79□□□□□ -1
RTF1-205ENST00000558298 ZNF286BP0CG31 522 aa8.79□□□□□ -1
RTF1-205ENST00000558298 GNAT1P11488 350 aa8.79□□□□□ -1
RTF1-205ENST00000558298 RAG1P15918 1043 aa8.79□□□□□ -1
RTF1-205ENST00000558298 RFC2P35250 354 aa8.79□□□□□ -1
RTF1-205ENST00000558298 SLC8A3P57103 927 aa8.79□□□□□ -1
RTF1-205ENST00000558298 FPGSQ05932 587 aa8.79□□□□□ -1
RTF1-205ENST00000558298 PTK7Q13308 1070 aa8.79□□□□□ -1
RTF1-205ENST00000558298 MCM6Q14566 821 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms