RNA–Protein interactions for RNA: ENST00000557331.1

RDH11-210, Transcript of retinol dehydrogenase 11, humanhuman

TSL 4

Gene RDH11, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-210ENST00000557331 RXRAP19793 462 aa11.54□□□□□ -0.56
RDH11-210ENST00000557331 AOC1P19801 751 aa11.54□□□□□ -0.56
RDH11-210ENST00000557331 ATP4AP20648 1035 aa11.54□□□□□ -0.56
RDH11-210ENST00000557331 SFPQP23246 707 aaKnown RBP eCLIP11.54□□□□□ -0.56
RDH11-210ENST00000557331 ID4P47928 161 aa11.54□□□□□ -0.56
RDH11-210ENST00000557331 BCAR1P56945 870 aa11.54□□□□□ -0.56
RDH11-210ENST00000557331 APOA5Q6Q788 366 aa11.54□□□□□ -0.56
RDH11-210ENST00000557331 CCDC149Q6ZUS6 474 aa11.54□□□□□ -0.56
RDH11-210ENST00000557331 ASCL5Q7RTU5 278 aa11.54□□□□□ -0.56
RDH11-210ENST00000557331 EXOC8Q8IYI6 725 aa11.54□□□□□ -0.56
RDH11-210ENST00000557331 RDM1Q8NG50 284 aa11.54□□□□□ -0.56
RDH11-210ENST00000557331 CRYGNQ8WXF5 182 aa11.54□□□□□ -0.56
RDH11-210ENST00000557331 STAMQ92783 540 aa11.54□□□□□ -0.56
RDH11-210ENST00000557331 PGBD4Q96DM1 585 aa11.54□□□□□ -0.56
RDH11-210ENST00000557331 RIT2Q99578 217 aa11.54□□□□□ -0.56
RDH11-210ENST00000557331 JPH2Q9BR39 696 aaPredicted RBP11.54□□□□□ -0.56
RDH11-210ENST00000557331 APOL5Q9BWW9 433 aa11.54□□□□□ -0.56
RDH11-210ENST00000557331 RNF19AQ9NV58 838 aa11.54□□□□□ -0.56
RDH11-210ENST00000557331 KANSL3Q9P2N6 904 aa11.54□□□□□ -0.56
RDH11-210ENST00000557331 GABBR1Q9UBS5 961 aa11.54□□□□□ -0.56
RDH11-210ENST00000557331 CNTNAP5Q8WYK1 1306 aa11.54□□□□□ -0.56
RDH11-210ENST00000557331 SPDYE4A6NLX3 237 aa11.53□□□□□ -0.56
RDH11-210ENST00000557331 OATP04181 439 aa11.53□□□□□ -0.56
RDH11-210ENST00000557331 CIITAP33076 1130 aa11.53□□□□□ -0.56
RDH11-210ENST00000557331 CA8P35219 290 aa11.53□□□□□ -0.56
RDH11-210ENST00000557331 GPC3P51654 580 aa11.53□□□□□ -0.56
RDH11-210ENST00000557331 JAK3P52333 1124 aa11.53□□□□□ -0.56
RDH11-210ENST00000557331 TBC1D8BQ0IIM8 1120 aa11.53□□□□□ -0.56
RDH11-210ENST00000557331 KRT32Q14532 448 aa11.53□□□□□ -0.56
RDH11-210ENST00000557331 NECTIN1Q15223 517 aa11.53□□□□□ -0.56
RDH11-210ENST00000557331 CLLU1OSQ5K130 101 aa11.53□□□□□ -0.56
RDH11-210ENST00000557331 RARS2Q5T160 578 aaKnown RBP11.53□□□□□ -0.56
RDH11-210ENST00000557331 CREB3L3Q68CJ9 461 aa11.53□□□□□ -0.56
RDH11-210ENST00000557331 DHX32Q7L7V1 743 aaKnown RBP11.53□□□□□ -0.56
RDH11-210ENST00000557331 GPR149Q86SP6 731 aa11.53□□□□□ -0.56
RDH11-210ENST00000557331 ZNF410Q86VK4 478 aa11.53□□□□□ -0.56
RDH11-210ENST00000557331 CCDC105Q8IYK2 499 aa11.53□□□□□ -0.56
RDH11-210ENST00000557331 REXO1Q8N1G1 1221 aaKnown RBP11.53□□□□□ -0.56
RDH11-210ENST00000557331 LINC01465Q8N7H1 131 aa11.53□□□□□ -0.56
RDH11-210ENST00000557331 RNF169Q8NCN4 708 aa11.53□□□□□ -0.56
RDH11-210ENST00000557331 NLRP7Q8WX94 980 aa11.53□□□□□ -0.56
RDH11-210ENST00000557331 IGSF21Q96ID5 467 aa11.53□□□□□ -0.56
RDH11-210ENST00000557331 C22orf23Q9BZE7 217 aa11.53□□□□□ -0.56
RDH11-210ENST00000557331 ZMYND12Q9H0C1 365 aa11.53□□□□□ -0.56
RDH11-210ENST00000557331 ZBP1Q9H171 429 aa11.53□□□□□ -0.56
RDH11-210ENST00000557331 DISC1Q9NRI5 854 aa11.53□□□□□ -0.56
RDH11-210ENST00000557331 WNT16Q9UBV4 365 aa11.53□□□□□ -0.56
RDH11-210ENST00000557331 TPRP12270 2363 aaKnown RBP11.53□□□□□ -0.56
RDH11-210ENST00000557331 SP100P23497 879 aaPredicted RBP11.52□□□□□ -0.57
RDH11-210ENST00000557331 PHKA2P46019 1235 aa11.52□□□□□ -0.57
RDH11-210ENST00000557331 METAP2P50579 478 aaKnown RBP eCLIP11.52□□□□□ -0.57
RDH11-210ENST00000557331 USP11P51784 963 aa11.52□□□□□ -0.57
RDH11-210ENST00000557331 CLCN3P51790 818 aa11.52□□□□□ -0.57
RDH11-210ENST00000557331 RNASELQ05823 741 aaKnown RBP11.52□□□□□ -0.57
RDH11-210ENST00000557331 FUT2Q10981 343 aa11.52□□□□□ -0.57
RDH11-210ENST00000557331 PFKFB3Q16875 520 aaPredicted RBP11.52□□□□□ -0.57
RDH11-210ENST00000557331 TYW1BQ6NUM6 668 aa11.52□□□□□ -0.57
RDH11-210ENST00000557331 ZC3H14Q6PJT7 736 aaKnown RBP11.52□□□□□ -0.57
RDH11-210ENST00000557331 ADSSL1Q8N142 457 aa11.52□□□□□ -0.57
RDH11-210ENST00000557331 CMASQ8NFW8 434 aaPredicted RBP11.52□□□□□ -0.57
RDH11-210ENST00000557331 EXOC6Q8TAG9 804 aa11.52□□□□□ -0.57
RDH11-210ENST00000557331 HELQQ8TDG4 1101 aa11.52□□□□□ -0.57
RDH11-210ENST00000557331 SLC22A17Q8WUG5 538 aa11.52□□□□□ -0.57
RDH11-210ENST00000557331 LSG1Q9H089 658 aaKnown RBP11.52□□□□□ -0.57
RDH11-210ENST00000557331 HCSTQ9UBK5 93 aa11.52□□□□□ -0.57
RDH11-210ENST00000557331 FBXL21Q9UKT6 434 aa11.52□□□□□ -0.57
RDH11-210ENST00000557331 DUSP12Q9UNI6 340 aa11.52□□□□□ -0.57
RDH11-210ENST00000557331 PLXNA3P51805 1871 aa11.51□□□□□ -0.57
RDH11-210ENST00000557331 ZC3H11AO75152 810 aaKnown RBP eCLIP11.51□□□□□ -0.57
RDH11-210ENST00000557331 ALDH2P05091 517 aa11.51□□□□□ -0.57
RDH11-210ENST00000557331 ASGR2P07307 311 aa11.51□□□□□ -0.57
RDH11-210ENST00000557331 GALTP07902 379 aa11.51□□□□□ -0.57
RDH11-210ENST00000557331 AKAP17AQ02040 695 aaKnown RBP11.51□□□□□ -0.57
RDH11-210ENST00000557331 LETM2Q2VYF4 491 aa11.51□□□□□ -0.57
RDH11-210ENST00000557331 TSGA10IPQ3SY00 556 aa11.51□□□□□ -0.57
RDH11-210ENST00000557331 PRR16Q569H4 304 aa11.51□□□□□ -0.57
RDH11-210ENST00000557331 XKR3Q5GH77 459 aa11.51□□□□□ -0.57
RDH11-210ENST00000557331 NOMO2Q5JPE7 1267 aa11.51□□□□□ -0.57
RDH11-210ENST00000557331 JAKMIP3Q5VZ66 844 aa11.51□□□□□ -0.57
RDH11-210ENST00000557331 TWF2Q6IBS0 349 aaKnown RBP11.51□□□□□ -0.57
RDH11-210ENST00000557331 FRMD5Q7Z6J6 570 aa11.51□□□□□ -0.57
RDH11-210ENST00000557331 DTWD2Q8NBA8 298 aa11.51□□□□□ -0.57
RDH11-210ENST00000557331 FLCNQ8NFG4 579 aa11.51□□□□□ -0.57
RDH11-210ENST00000557331 CCDC148Q8NFR7 591 aa11.51□□□□□ -0.57
RDH11-210ENST00000557331 URGCPQ8TCY9 931 aa11.51□□□□□ -0.57
RDH11-210ENST00000557331 HDAC7Q8WUI4 952 aa11.51□□□□□ -0.57
RDH11-210ENST00000557331 PGBD1Q96JS3 809 aa11.51□□□□□ -0.57
RDH11-210ENST00000557331 PPP1R16BQ96T49 567 aa11.51□□□□□ -0.57
RDH11-210ENST00000557331 TMEM175Q9BSA9 504 aa11.51□□□□□ -0.57
RDH11-210ENST00000557331 NIFKQ9BYG3 293 aaKnown RBP11.51□□□□□ -0.57
RDH11-210ENST00000557331 UBN1Q9NPG3 1134 aa11.51□□□□□ -0.57
RDH11-210ENST00000557331 MRPL17Q9NRX2 175 aaKnown RBP11.51□□□□□ -0.57
RDH11-210ENST00000557331 PPME1Q9Y570 386 aa11.51□□□□□ -0.57
RDH11-210ENST00000557331 CNTNAP2Q9UHC6 1331 aa11.51□□□□□ -0.57
RDH11-210ENST00000557331 CEP250Q9BV73 2442 aa11.5□□□□□ -0.57
RDH11-210ENST00000557331 GOLGA8AA7E2F4 631 aa11.5□□□□□ -0.57
RDH11-210ENST00000557331 GOLGA8BA8MQT2 603 aa11.5□□□□□ -0.57
RDH11-210ENST00000557331 DKC1O60832 514 aaKnown RBP eCLIP11.5□□□□□ -0.57
RDH11-210ENST00000557331 GAS7O60861 476 aa11.5□□□□□ -0.57
RDH11-210ENST00000557331 LMNAP02545 664 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms