RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 TGFB1I1O43294 461 aa16.63■□□□□ 0.25
TMEM55B-207ENST00000557041 FTLP02792 175 aaPredicted RBP16.63■□□□□ 0.25
TMEM55B-207ENST00000557041 NF2P35240 595 aa16.63■□□□□ 0.25
TMEM55B-207ENST00000557041 BAG6P46379 1132 aa16.63■□□□□ 0.25
TMEM55B-207ENST00000557041 DMP1Q13316 513 aaPredicted RBP16.63■□□□□ 0.25
TMEM55B-207ENST00000557041 FOXR1Q6PIV2 292 aa16.63■□□□□ 0.25
TMEM55B-207ENST00000557041 MICALL2Q8IY33 904 aa16.63■□□□□ 0.25
TMEM55B-207ENST00000557041 DNAJC17Q9NVM6 304 aaKnown RBP16.63■□□□□ 0.25
TMEM55B-207ENST00000557041 MAP2K7O14733 419 aa16.62■□□□□ 0.25
TMEM55B-207ENST00000557041 CYP26A1O43174 497 aa16.62■□□□□ 0.25
TMEM55B-207ENST00000557041 KIF4AO95239 1232 aa16.62■□□□□ 0.25
TMEM55B-207ENST00000557041 ITGA4P13612 1032 aa16.62■□□□□ 0.25
TMEM55B-207ENST00000557041 VAMP7P51809 220 aa16.62■□□□□ 0.25
TMEM55B-207ENST00000557041 SPIRE1Q08AE8 756 aa16.62■□□□□ 0.25
TMEM55B-207ENST00000557041 ZSWIM2Q8NEG5 633 aa16.62■□□□□ 0.25
TMEM55B-207ENST00000557041 SLC35G2Q8TBE7 412 aa16.62■□□□□ 0.25
TMEM55B-207ENST00000557041 POLR3CQ9BUI4 534 aaPredicted RBP16.62■□□□□ 0.25
TMEM55B-207ENST00000557041 PIM2Q9P1W9 311 aa16.62■□□□□ 0.25
TMEM55B-207ENST00000557041 ATP8A1Q9Y2Q0 1164 aa16.62■□□□□ 0.25
TMEM55B-207ENST00000557041 NDUFAB1O14561 156 aa16.62■□□□□ 0.25
TMEM55B-207ENST00000557041 SOX5P35711 763 aa16.62■□□□□ 0.25
TMEM55B-207ENST00000557041 SNX1Q13596 522 aa16.62■□□□□ 0.25
TMEM55B-207ENST00000557041 TNFAIP1Q13829 316 aa16.62■□□□□ 0.25
TMEM55B-207ENST00000557041 ANKRD35Q8N283 1001 aa16.62■□□□□ 0.25
TMEM55B-207ENST00000557041 SLC20A1Q8WUM9 679 aa16.62■□□□□ 0.25
TMEM55B-207ENST00000557041 BBXQ8WY36 941 aaPredicted RBP16.62■□□□□ 0.25
TMEM55B-207ENST00000557041 BTBD6Q96KE9 485 aa16.62■□□□□ 0.25
TMEM55B-207ENST00000557041 ACCSQ96QU6 501 aa16.62■□□□□ 0.25
TMEM55B-207ENST00000557041 HSD17B14Q9BPX1 270 aa16.62■□□□□ 0.25
TMEM55B-207ENST00000557041 DEFB129Q9H1M3 183 aa16.62■□□□□ 0.25
TMEM55B-207ENST00000557041 TUFT1Q9NNX1 390 aa16.62■□□□□ 0.25
TMEM55B-207ENST00000557041 STK24Q9Y6E0 443 aa16.62■□□□□ 0.25
TMEM55B-207ENST00000557041 CYP3A7-CYP3A51PA0A087WV96 503 aa16.62■□□□□ 0.25
TMEM55B-207ENST00000557041 SART1O43290 800 aaKnown RBP16.62■□□□□ 0.25
TMEM55B-207ENST00000557041 DAPK3O43293 454 aa16.62■□□□□ 0.25
TMEM55B-207ENST00000557041 ATP9AO75110 1047 aa16.62■□□□□ 0.25
TMEM55B-207ENST00000557041 CYP3A7P24462 503 aa16.62■□□□□ 0.25
TMEM55B-207ENST00000557041 PLTPP55058 493 aa16.62■□□□□ 0.25
TMEM55B-207ENST00000557041 CDK17Q00537 523 aa16.62■□□□□ 0.25
TMEM55B-207ENST00000557041 RPUSD2Q8IZ73 545 aaKnown RBP16.62■□□□□ 0.25
TMEM55B-207ENST00000557041 METTL13Q8N6R0 699 aa16.62■□□□□ 0.25
TMEM55B-207ENST00000557041 PPP1R16BQ96T49 567 aa16.62■□□□□ 0.25
TMEM55B-207ENST00000557041 TOPORSQ9NS56 1045 aaPredicted RBP16.62■□□□□ 0.25
TMEM55B-207ENST00000557041 TAS2R14Q9NYV8 317 aa16.62■□□□□ 0.25
TMEM55B-207ENST00000557041 UTP11Q9Y3A2 253 aaKnown RBP16.62■□□□□ 0.25
TMEM55B-207ENST00000557041 NOC2LQ9Y3T9 749 aaKnown RBP16.62■□□□□ 0.25
TMEM55B-207ENST00000557041 BUB1BO60566 1050 aaPredicted RBP16.61■□□□□ 0.25
TMEM55B-207ENST00000557041 MARK3P27448 753 aa16.61■□□□□ 0.25
TMEM55B-207ENST00000557041 BFSP1Q12934 665 aa16.61■□□□□ 0.25
TMEM55B-207ENST00000557041 NNTQ13423 1086 aa16.61■□□□□ 0.25
TMEM55B-207ENST00000557041 DALRD3Q5D0E6 543 aaKnown RBP16.61■□□□□ 0.25
TMEM55B-207ENST00000557041 WDR93Q6P2C0 686 aa16.61■□□□□ 0.25
TMEM55B-207ENST00000557041 CBWD2Q8IUF1 395 aa16.61■□□□□ 0.25
TMEM55B-207ENST00000557041 XXYLT1Q8NBI6 393 aa16.61■□□□□ 0.25
TMEM55B-207ENST00000557041 ARL8AQ96BM9 186 aa16.61■□□□□ 0.25
TMEM55B-207ENST00000557041 FAM213AQ9BRX8 229 aa16.61■□□□□ 0.25
TMEM55B-207ENST00000557041 EDEM3Q9BZQ6 932 aa16.61■□□□□ 0.25
TMEM55B-207ENST00000557041 THAP2Q9H0W7 228 aa16.61■□□□□ 0.25
TMEM55B-207ENST00000557041 COL20A1Q9P218 1284 aa16.61■□□□□ 0.25
TMEM55B-207ENST00000557041 PLIN4Q96Q06 1357 aa16.61■□□□□ 0.25
TMEM55B-207ENST00000557041 PCNTO95613 3336 aa16.61■□□□□ 0.25
TMEM55B-207ENST00000557041 PSMD10O75832 226 aa16.61■□□□□ 0.25
TMEM55B-207ENST00000557041 HOXD13P35453 343 aa16.61■□□□□ 0.25
TMEM55B-207ENST00000557041 SEZ6Q53EL9 994 aa16.61■□□□□ 0.25
TMEM55B-207ENST00000557041 C1orf186Q6ZWK4 172 aa16.61■□□□□ 0.25
TMEM55B-207ENST00000557041 PASD1Q8IV76 773 aa16.61■□□□□ 0.25
TMEM55B-207ENST00000557041 CCDC105Q8IYK2 499 aa16.61■□□□□ 0.25
TMEM55B-207ENST00000557041 CCDC26Q8TAB7 109 aa16.61■□□□□ 0.25
TMEM55B-207ENST00000557041 TTI1O43156 1089 aa16.61■□□□□ 0.25
TMEM55B-207ENST00000557041 KRT71Q3SY84 523 aa16.61■□□□□ 0.25
TMEM55B-207ENST00000557041 TSEN2Q8NCE0 465 aaKnown RBP16.61■□□□□ 0.25
TMEM55B-207ENST00000557041 TRIM51Q9BSJ1 452 aa16.61■□□□□ 0.25
TMEM55B-207ENST00000557041 CAPS2Q9BXY5 557 aa16.61■□□□□ 0.25
TMEM55B-207ENST00000557041 GANQ9H2C0 597 aa16.61■□□□□ 0.25
TMEM55B-207ENST00000557041 TRAF3IP3Q9Y228 551 aa16.61■□□□□ 0.25
TMEM55B-207ENST00000557041 DDX3XO00571 662 aaKnown RBP eCLIP16.6■□□□□ 0.252e-8■■□□□ 14.3
TMEM55B-207ENST00000557041 OSTNP61366 133 aa16.6■□□□□ 0.25
TMEM55B-207ENST00000557041 TRIP13Q15645 432 aaPredicted RBP16.6■□□□□ 0.25
TMEM55B-207ENST00000557041 TKFCQ3LXA3 575 aa16.6■□□□□ 0.25
TMEM55B-207ENST00000557041 ZNF394Q53GI3 561 aa16.6■□□□□ 0.25
TMEM55B-207ENST00000557041 IFT74Q96LB3 600 aa16.6■□□□□ 0.25
TMEM55B-207ENST00000557041 HSPBP1Q9NZL4 362 aa16.6■□□□□ 0.25
TMEM55B-207ENST00000557041 CNOT7Q9UIV1 285 aaKnown RBP16.6■□□□□ 0.25
TMEM55B-207ENST00000557041 PCDHA2Q9Y5H9 948 aa16.6■□□□□ 0.25
TMEM55B-207ENST00000557041 HGSO14964 777 aaPredicted RBP16.6■□□□□ 0.25
TMEM55B-207ENST00000557041 LMNB1P20700 586 aa16.6■□□□□ 0.25
TMEM55B-207ENST00000557041 SETQ01105 290 aaPredicted RBP16.6■□□□□ 0.25
TMEM55B-207ENST00000557041 PPFIA1Q13136 1202 aa16.6■□□□□ 0.25
TMEM55B-207ENST00000557041 MRRFQ96E11 262 aaKnown RBP16.6■□□□□ 0.25
TMEM55B-207ENST00000557041 APEX2Q9UBZ4 518 aa16.6■□□□□ 0.25
TMEM55B-207ENST00000557041 GINS2Q9Y248 185 aa16.6■□□□□ 0.25
TMEM55B-207ENST00000557041 SNX24Q9Y343 169 aa16.6■□□□□ 0.25
TMEM55B-207ENST00000557041 MYH1P12882 1939 aa16.6■□□□□ 0.25
TMEM55B-207ENST00000557041 IGLV3-22A0A075B6J6 115 aa16.6■□□□□ 0.25
TMEM55B-207ENST00000557041 GSTTP1A0A1W2PQM5 241 aa16.6■□□□□ 0.25
TMEM55B-207ENST00000557041 LIG4P49917 911 aa16.6■□□□□ 0.25
TMEM55B-207ENST00000557041 PPP1R7Q15435 360 aa16.6■□□□□ 0.25
TMEM55B-207ENST00000557041 SPDYE2Q495Y8 402 aa16.6■□□□□ 0.25
TMEM55B-207ENST00000557041 AADACL2Q6P093 401 aa16.6■□□□□ 0.25
TMEM55B-207ENST00000557041 MOXD1Q6UVY6 613 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms