RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 NGRNQ9NPE2 291 aaKnown RBP9.96□□□□□ -0.82
TDP1-208ENST00000553989 DISC1Q9NRI5 854 aa9.96□□□□□ -0.82
TDP1-208ENST00000553989 NRBP2Q9NSY0 501 aa9.96□□□□□ -0.82
TDP1-208ENST00000553989 FAM217BQ9NTX9 383 aaPredicted RBP9.96□□□□□ -0.82
TDP1-208ENST00000553989 LZTS1Q9Y250 596 aa9.96□□□□□ -0.82
TDP1-208ENST00000553989 HIDE1A8MVS5 230 aa9.95□□□□□ -0.82
TDP1-208ENST00000553989 EIF4BP23588 611 aaKnown RBP9.95□□□□□ -0.82
TDP1-208ENST00000553989 PLCB3Q01970 1234 aa9.95□□□□□ -0.82
TDP1-208ENST00000553989 PRKCEQ02156 737 aa9.95□□□□□ -0.82
TDP1-208ENST00000553989 DSC3Q14574 896 aa9.95□□□□□ -0.82
TDP1-208ENST00000553989 SMC1AQ14683 1233 aaKnown RBP9.95□□□□□ -0.82
TDP1-208ENST00000553989 TSGA10IPQ3SY00 556 aa9.95□□□□□ -0.82
TDP1-208ENST00000553989 PPP1R15BQ5SWA1 713 aa9.95□□□□□ -0.82
TDP1-208ENST00000553989 CES5AQ6NT32 575 aa9.95□□□□□ -0.82
TDP1-208ENST00000553989 BLOC1S2Q6QNY1 142 aa9.95□□□□□ -0.82
TDP1-208ENST00000553989 BMP8AQ7Z5Y6 402 aa9.95□□□□□ -0.82
TDP1-208ENST00000553989 ECHDC2Q86YB7 292 aa9.95□□□□□ -0.82
TDP1-208ENST00000553989 FBXL6Q8N531 539 aa9.95□□□□□ -0.82
TDP1-208ENST00000553989 PRSS33Q8NF86 280 aa9.95□□□□□ -0.82
TDP1-208ENST00000553989 HELQQ8TDG4 1101 aa9.95□□□□□ -0.82
TDP1-208ENST00000553989 SUSD6Q92537 303 aa9.95□□□□□ -0.82
TDP1-208ENST00000553989 CASP10Q92851 521 aa9.95□□□□□ -0.82
TDP1-208ENST00000553989 PHKBQ93100 1093 aa9.95□□□□□ -0.82
TDP1-208ENST00000553989 CASD1Q96PB1 797 aa9.95□□□□□ -0.82
TDP1-208ENST00000553989 PRRX2Q99811 253 aa9.95□□□□□ -0.82
TDP1-208ENST00000553989 TEKT3Q9BXF9 490 aa9.95□□□□□ -0.82
TDP1-208ENST00000553989 SLC26A6Q9BXS9 759 aa9.95□□□□□ -0.82
TDP1-208ENST00000553989 MRPL9Q9BYD2 267 aaKnown RBP9.95□□□□□ -0.82
TDP1-208ENST00000553989 SLKQ9H2G2 1235 aaPredicted RBP9.95□□□□□ -0.82
TDP1-208ENST00000553989 DACT1Q9NYF0 836 aa9.95□□□□□ -0.82
TDP1-208ENST00000553989 SPG21Q9NZD8 308 aa9.95□□□□□ -0.82
TDP1-208ENST00000553989 SEPT9Q9UHD8 586 aaPredicted RBP9.95□□□□□ -0.82
TDP1-208ENST00000553989 EVPLQ92817 2033 aa9.95□□□□□ -0.82
TDP1-208ENST00000553989 PIEZO1Q92508 2521 aa9.95□□□□□ -0.82
TDP1-208ENST00000553989 TECTAO75443 2155 aa9.94□□□□□ -0.82
TDP1-208ENST00000553989 TTLL13PA6NNM8 815 aa9.94□□□□□ -0.82
TDP1-208ENST00000553989 ADAMTS3O15072 1205 aa9.94□□□□□ -0.82
TDP1-208ENST00000553989 PRPF3O43395 683 aaKnown RBP9.94□□□□□ -0.82
TDP1-208ENST00000553989 FGFR4P22455 802 aa9.94□□□□□ -0.82
TDP1-208ENST00000553989 ALDH7A1P49419 539 aaKnown RBP9.94□□□□□ -0.82
TDP1-208ENST00000553989 GPC3P51654 580 aa9.94□□□□□ -0.82
TDP1-208ENST00000553989 JAK3P52333 1124 aa9.94□□□□□ -0.82
TDP1-208ENST00000553989 NLRP5P59047 1200 aa9.94□□□□□ -0.82
TDP1-208ENST00000553989 FAM189BP81408 668 aa9.94□□□□□ -0.82
TDP1-208ENST00000553989 PTPN21Q16825 1174 aa9.94□□□□□ -0.82
TDP1-208ENST00000553989 IER5LQ5T953 404 aa9.94□□□□□ -0.82
TDP1-208ENST00000553989 LRCH2Q5VUJ6 765 aa9.94□□□□□ -0.82
TDP1-208ENST00000553989 LRRC55Q6ZSA7 311 aa9.94□□□□□ -0.82
TDP1-208ENST00000553989 ZNF710Q8N1W2 664 aa9.94□□□□□ -0.82
TDP1-208ENST00000553989 CRYGNQ8WXF5 182 aa9.94□□□□□ -0.82
TDP1-208ENST00000553989 TMEM169Q96HH4 297 aa9.94□□□□□ -0.82
TDP1-208ENST00000553989 ADAMTS10Q9H324 1103 aa9.94□□□□□ -0.82
TDP1-208ENST00000553989 VPS54Q9P1Q0 977 aa9.94□□□□□ -0.82
TDP1-208ENST00000553989 NR2E1Q9Y466 385 aa9.94□□□□□ -0.82
TDP1-208ENST00000553989 MYH9P35579 1960 aaKnown RBP9.94□□□□□ -0.82
TDP1-208ENST00000553989 ZNF318Q5VUA4 2279 aa9.93□□□□□ -0.82
TDP1-208ENST00000553989 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.93□□□□□ -0.82
TDP1-208ENST00000553989 NT5C1B-RDH14C9J2C7 533 aa9.93□□□□□ -0.82
TDP1-208ENST00000553989 MSH4O15457 936 aa9.93□□□□□ -0.82
TDP1-208ENST00000553989 ZC3H11AO75152 810 aaKnown RBP eCLIP9.93□□□□□ -0.82
TDP1-208ENST00000553989 DARSP14868 501 aaKnown RBP9.93□□□□□ -0.82
TDP1-208ENST00000553989 HOXB8P17481 243 aaPredicted RBP9.93□□□□□ -0.82
TDP1-208ENST00000553989 SFPQP23246 707 aaKnown RBP eCLIP9.93□□□□□ -0.82
TDP1-208ENST00000553989 SFNP31947 248 aa9.93□□□□□ -0.82
TDP1-208ENST00000553989 CIITAP33076 1130 aa9.93□□□□□ -0.82
TDP1-208ENST00000553989 DNM2P50570 870 aa9.93□□□□□ -0.82
TDP1-208ENST00000553989 CCT2P78371 535 aaKnown RBP9.93□□□□□ -0.82
TDP1-208ENST00000553989 UGCGQ16739 394 aa9.93□□□□□ -0.82
TDP1-208ENST00000553989 LONRF3Q496Y0 759 aa9.93□□□□□ -0.82
TDP1-208ENST00000553989 MTERF2Q49AM1 385 aa9.93□□□□□ -0.82
TDP1-208ENST00000553989 CLLU1OSQ5K130 101 aa9.93□□□□□ -0.82
TDP1-208ENST00000553989 TWF2Q6IBS0 349 aaKnown RBP9.93□□□□□ -0.82
TDP1-208ENST00000553989 SYCE2Q6PIF2 218 aa9.93□□□□□ -0.82
TDP1-208ENST00000553989 TMEM184AQ6ZMB5 413 aa9.93□□□□□ -0.82
TDP1-208ENST00000553989 MIER3Q7Z3K6 550 aa9.93□□□□□ -0.82
TDP1-208ENST00000553989 GBP4Q96PP9 640 aa9.93□□□□□ -0.82
TDP1-208ENST00000553989 PHOX2BQ99453 314 aa9.93□□□□□ -0.82
TDP1-208ENST00000553989 RNF26Q9BY78 433 aaPredicted RBP9.93□□□□□ -0.82
TDP1-208ENST00000553989 GCOM2Q9BZD3 368 aaPredicted RBP9.93□□□□□ -0.82
TDP1-208ENST00000553989 S1PR5Q9H228 398 aa9.93□□□□□ -0.82
TDP1-208ENST00000553989 RNF19AQ9NV58 838 aa9.93□□□□□ -0.82
TDP1-208ENST00000553989 INPP5FQ9Y2H2 1132 aa9.93□□□□□ -0.82
TDP1-208ENST00000553989 HCFC2Q9Y5Z7 792 aa9.93□□□□□ -0.82
TDP1-208ENST00000553989 C5orf42Q9H799 3197 aa9.93□□□□□ -0.82
TDP1-208ENST00000553989 A0A0U1RQF3 1178 aa9.92□□□□□ -0.82
TDP1-208ENST00000553989 C2orf71A6NGG8 1288 aa9.92□□□□□ -0.82
TDP1-208ENST00000553989 ZNF862O60290 1169 aa9.92□□□□□ -0.82
TDP1-208ENST00000553989 CSDE1O75534 798 aaKnown RBP9.92□□□□□ -0.82
TDP1-208ENST00000553989 EOMESO95936 686 aa9.92□□□□□ -0.82
TDP1-208ENST00000553989 VCPP55072 806 aaKnown RBP9.92□□□□□ -0.82
TDP1-208ENST00000553989 BCAR1P56945 870 aa9.92□□□□□ -0.82
TDP1-208ENST00000553989 RNASELQ05823 741 aaKnown RBP9.92□□□□□ -0.82
TDP1-208ENST00000553989 MTMR3Q13615 1198 aa9.92□□□□□ -0.82
TDP1-208ENST00000553989 TRIM22Q8IYM9 498 aa9.92□□□□□ -0.82
TDP1-208ENST00000553989 SLC39A11Q8N1S5 342 aa9.92□□□□□ -0.82
TDP1-208ENST00000553989 LINC01465Q8N7H1 131 aa9.92□□□□□ -0.82
TDP1-208ENST00000553989 ATOH1Q92858 354 aaPredicted RBP9.92□□□□□ -0.82
TDP1-208ENST00000553989 GJA10Q969M2 543 aa9.92□□□□□ -0.82
TDP1-208ENST00000553989 LENG9Q96B70 501 aa9.92□□□□□ -0.82
TDP1-208ENST00000553989 NECTIN4Q96NY8 510 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms