RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 LARP6Q9BRS8 491 aaKnown RBP13.35□□□□□ -0.27
SRP54-203ENST00000553544 SMOC2Q9H3U7 446 aa13.35□□□□□ -0.27
SRP54-203ENST00000553544 SH3GLB2Q9NR46 395 aa13.35□□□□□ -0.27
SRP54-203ENST00000553544 PDRG1Q9NUG6 133 aa13.35□□□□□ -0.27
SRP54-203ENST00000553544 CDH22Q9UJ99 828 aa13.35□□□□□ -0.27
SRP54-203ENST00000553544 PLXNA4Q9HCM2 1894 aa13.35□□□□□ -0.27
SRP54-203ENST00000553544 DMDP11532 3685 aa13.35□□□□□ -0.27
SRP54-203ENST00000553544 MAGEB2O15479 319 aa13.34□□□□□ -0.27
SRP54-203ENST00000553544 EDIL3O43854 480 aa13.34□□□□□ -0.27
SRP54-203ENST00000553544 EOMESO95936 686 aa13.34□□□□□ -0.27
SRP54-203ENST00000553544 CCNE2O96020 404 aa13.34□□□□□ -0.27
SRP54-203ENST00000553544 VTNP04004 478 aa13.34□□□□□ -0.27
SRP54-203ENST00000553544 WEE2P0C1S8 567 aa13.34□□□□□ -0.27
SRP54-203ENST00000553544 GIT2Q14161 759 aa13.34□□□□□ -0.27
SRP54-203ENST00000553544 RARS2Q5T160 578 aaKnown RBP13.34□□□□□ -0.27
SRP54-203ENST00000553544 MIS18BP1Q6P0N0 1132 aa13.34□□□□□ -0.27
SRP54-203ENST00000553544 ECHDC2Q86YB7 292 aa13.34□□□□□ -0.27
SRP54-203ENST00000553544 REXO1Q8N1G1 1221 aaKnown RBP13.34□□□□□ -0.27
SRP54-203ENST00000553544 SLC39A11Q8N1S5 342 aa13.34□□□□□ -0.27
SRP54-203ENST00000553544 C12orf76Q8N812 135 aaPredicted RBP13.34□□□□□ -0.27
SRP54-203ENST00000553544 RNF169Q8NCN4 708 aa13.34□□□□□ -0.27
SRP54-203ENST00000553544 FLCNQ8NFG4 579 aa13.34□□□□□ -0.27
SRP54-203ENST00000553544 CCDC148Q8NFR7 591 aa13.34□□□□□ -0.27
SRP54-203ENST00000553544 BBXQ8WY36 941 aaPredicted RBP13.34□□□□□ -0.27
SRP54-203ENST00000553544 ACSF2Q96CM8 615 aaPredicted RBP13.34□□□□□ -0.27
SRP54-203ENST00000553544 CYP26B1Q9NR63 512 aa13.34□□□□□ -0.27
SRP54-203ENST00000553544 RNF19AQ9NV58 838 aa13.34□□□□□ -0.27
SRP54-203ENST00000553544 DZANK1Q9NVP4 752 aa13.34□□□□□ -0.27
SRP54-203ENST00000553544 VPS54Q9P1Q0 977 aa13.34□□□□□ -0.27
SRP54-203ENST00000553544 KIAA1671Q9BY89 1806 aa13.34□□□□□ -0.27
SRP54-203ENST00000553544 GVINP1Q7Z2Y8 2422 aa13.33□□□□□ -0.27
SRP54-203ENST00000553544 ZBTB42B2RXF5 422 aa13.33□□□□□ -0.28
SRP54-203ENST00000553544 DDX39AO00148 427 aaKnown RBP13.33□□□□□ -0.28
SRP54-203ENST00000553544 DHX15O43143 795 aaKnown RBP13.33□□□□□ -0.28
SRP54-203ENST00000553544 C22orf31O95567 290 aa13.33□□□□□ -0.28
SRP54-203ENST00000553544 ATP4AP20648 1035 aa13.33□□□□□ -0.28
SRP54-203ENST00000553544 TMOD1P28289 359 aa13.33□□□□□ -0.28
SRP54-203ENST00000553544 CIITAP33076 1130 aa13.33□□□□□ -0.28
SRP54-203ENST00000553544 NLRP11P59045 1033 aaKnown RBP13.33□□□□□ -0.28
SRP54-203ENST00000553544 KIAA1841Q6NSI8 718 aa13.33□□□□□ -0.28
SRP54-203ENST00000553544 PLA2G4DQ86XP0 818 aa13.33□□□□□ -0.28
SRP54-203ENST00000553544 CCDC60Q8IWA6 550 aaPredicted RBP13.33□□□□□ -0.28
SRP54-203ENST00000553544 BICD2Q8TD16 824 aa13.33□□□□□ -0.28
SRP54-203ENST00000553544 TMEM169Q96HH4 297 aa13.33□□□□□ -0.28
SRP54-203ENST00000553544 CEP131Q9UPN4 1083 aa13.33□□□□□ -0.28
SRP54-203ENST00000553544 EVPLQ92817 2033 aa13.33□□□□□ -0.28
SRP54-203ENST00000553544 EP300Q09472 2414 aaPredicted RBP13.32□□□□□ -0.28
SRP54-203ENST00000553544 FNDC1Q4ZHG4 1894 aaPredicted RBP13.32□□□□□ -0.28
SRP54-203ENST00000553544 A0A0U1RQF3 1178 aa13.32□□□□□ -0.28
SRP54-203ENST00000553544 CARNS1A5YM72 827 aa13.32□□□□□ -0.28
SRP54-203ENST00000553544 M0R2N6 131 aa13.32□□□□□ -0.28
SRP54-203ENST00000553544 DEXIO95424 95 aa13.32□□□□□ -0.28
SRP54-203ENST00000553544 AOC1P19801 751 aa13.32□□□□□ -0.28
SRP54-203ENST00000553544 EIF4BP23588 611 aaKnown RBP13.32□□□□□ -0.28
SRP54-203ENST00000553544 BCAR1P56945 870 aa13.32□□□□□ -0.28
SRP54-203ENST00000553544 SSRP1Q08945 709 aaKnown RBP13.32□□□□□ -0.28
SRP54-203ENST00000553544 SCRN1Q12765 414 aa13.32□□□□□ -0.28
SRP54-203ENST00000553544 STK3Q13188 491 aa13.32□□□□□ -0.28
SRP54-203ENST00000553544 TDGQ13569 410 aa13.32□□□□□ -0.28
SRP54-203ENST00000553544 NPY5RQ15761 445 aa13.32□□□□□ -0.28
SRP54-203ENST00000553544 EFCAB12Q6NXP0 572 aa13.32□□□□□ -0.28
SRP54-203ENST00000553544 OTOP3Q7RTS5 596 aa13.32□□□□□ -0.28
SRP54-203ENST00000553544 TRMT1LQ7Z2T5 733 aaKnown RBP13.32□□□□□ -0.28
SRP54-203ENST00000553544 TRIM22Q8IYM9 498 aa13.32□□□□□ -0.28
SRP54-203ENST00000553544 FAM177A1Q8N128 213 aaPredicted RBP13.32□□□□□ -0.28
SRP54-203ENST00000553544 VPS52Q8N1B4 723 aa13.32□□□□□ -0.28
SRP54-203ENST00000553544 KCNG4Q8TDN1 519 aa13.32□□□□□ -0.28
SRP54-203ENST00000553544 MAP7D2Q96T17 732 aa13.32□□□□□ -0.28
SRP54-203ENST00000553544 RTP3Q9BQQ7 232 aa13.32□□□□□ -0.28
SRP54-203ENST00000553544 MRPL9Q9BYD2 267 aaKnown RBP13.32□□□□□ -0.28
SRP54-203ENST00000553544 SEMA4AQ9H3S1 761 aa13.32□□□□□ -0.28
SRP54-203ENST00000553544 TPCN1Q9ULQ1 816 aa13.32□□□□□ -0.28
SRP54-203ENST00000553544 AKT3Q9Y243 479 aa13.32□□□□□ -0.28
SRP54-203ENST00000553544 MAFBQ9Y5Q3 323 aaPredicted RBP13.32□□□□□ -0.28
SRP54-203ENST00000553544 DCHS1Q96JQ0 3298 aa13.32□□□□□ -0.28
SRP54-203ENST00000553544 PLXNA3P51805 1871 aa13.31□□□□□ -0.28
SRP54-203ENST00000553544 ZNF292O60281 2723 aa13.31□□□□□ -0.28
SRP54-203ENST00000553544 NT5C1B-RDH14C9J2C7 533 aa13.31□□□□□ -0.28
SRP54-203ENST00000553544 IPO5O00410 1097 aaKnown RBP13.31□□□□□ -0.28
SRP54-203ENST00000553544 CPLX1O14810 134 aa13.31□□□□□ -0.28
SRP54-203ENST00000553544 PI15O43692 258 aa13.31□□□□□ -0.28
SRP54-203ENST00000553544 PFKFB2O60825 505 aa13.31□□□□□ -0.28
SRP54-203ENST00000553544 SEC24BO95487 1268 aa13.31□□□□□ -0.28
SRP54-203ENST00000553544 POLGP54098 1239 aaPredicted RBP13.31□□□□□ -0.28
SRP54-203ENST00000553544 ANGPT1Q15389 498 aa13.31□□□□□ -0.28
SRP54-203ENST00000553544 CLLU1OSQ5K130 101 aa13.31□□□□□ -0.28
SRP54-203ENST00000553544 KANK3Q6NY19 840 aa13.31□□□□□ -0.28
SRP54-203ENST00000553544 CPLX2Q6PUV4 134 aaKnown RBP13.31□□□□□ -0.28
SRP54-203ENST00000553544 CABP7Q86V35 215 aa13.31□□□□□ -0.28
SRP54-203ENST00000553544 PPFIBP1Q86W92 1011 aa13.31□□□□□ -0.28
SRP54-203ENST00000553544 DTWD2Q8NBA8 298 aa13.31□□□□□ -0.28
SRP54-203ENST00000553544 LENG9Q96B70 501 aa13.31□□□□□ -0.28
SRP54-203ENST00000553544 ADAMTS10Q9H324 1103 aa13.31□□□□□ -0.28
SRP54-203ENST00000553544 TBC1D22BQ9NU19 505 aa13.31□□□□□ -0.28
SRP54-203ENST00000553544 DACT1Q9NYF0 836 aa13.31□□□□□ -0.28
SRP54-203ENST00000553544 FBXL21Q9UKT6 434 aa13.31□□□□□ -0.28
SRP54-203ENST00000553544 PCDHA4Q9UN74 947 aa13.31□□□□□ -0.28
SRP54-203ENST00000553544 IRAK3Q9Y616 596 aa13.31□□□□□ -0.28
SRP54-203ENST00000553544 CACNA1AO00555 2505 aa13.31□□□□□ -0.28
SRP54-203ENST00000553544 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms