RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 PPP2R5AQ15172 486 aa13.93□□□□□ -0.18
CACNB3-223ENST00000552480 GJC2Q5T442 439 aaPredicted RBP13.93□□□□□ -0.18
CACNB3-223ENST00000552480 CEP135Q66GS9 1140 aa13.93□□□□□ -0.18
CACNB3-223ENST00000552480 CNGA4Q8IV77 575 aa13.93□□□□□ -0.18
CACNB3-223ENST00000552480 MAP4K3Q8IVH8 894 aa13.93□□□□□ -0.18
CACNB3-223ENST00000552480 KCNN1Q92952 543 aa13.93□□□□□ -0.18
CACNB3-223ENST00000552480 CCDC51Q96ER9 411 aa13.93□□□□□ -0.18
CACNB3-223ENST00000552480 PANX2Q96RD6 677 aa13.93□□□□□ -0.18
CACNB3-223ENST00000552480 NUP58Q9BVL2 599 aa13.93□□□□□ -0.18
CACNB3-223ENST00000552480 TMX1Q9H3N1 280 aa13.93□□□□□ -0.18
CACNB3-223ENST00000552480 ERAP1Q9NZ08 941 aa13.93□□□□□ -0.18
CACNB3-223ENST00000552480 ARMCX3Q9UH62 379 aaPredicted RBP13.93□□□□□ -0.18
CACNB3-223ENST00000552480 GJD2Q9UKL4 321 aa13.93□□□□□ -0.18
CACNB3-223ENST00000552480 TBX20Q9UMR3 447 aa13.93□□□□□ -0.18
CACNB3-223ENST00000552480 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.93□□□□□ -0.18
CACNB3-223ENST00000552480 SIP14410 1827 aa13.92□□□□□ -0.18
CACNB3-223ENST00000552480 DENND3A2RUS2 1198 aa13.92□□□□□ -0.18
CACNB3-223ENST00000552480 HBP1O60381 514 aa13.92□□□□□ -0.18
CACNB3-223ENST00000552480 AKAP3O75969 853 aa13.92□□□□□ -0.18
CACNB3-223ENST00000552480 HOXD8P13378 290 aaPredicted RBP13.92□□□□□ -0.18
CACNB3-223ENST00000552480 MARK3P27448 753 aa13.92□□□□□ -0.18
CACNB3-223ENST00000552480 CASP14P31944 242 aa13.92□□□□□ -0.18
CACNB3-223ENST00000552480 PSMC2P35998 433 aaKnown RBP13.92□□□□□ -0.18
CACNB3-223ENST00000552480 NAMPTP43490 491 aa13.92□□□□□ -0.18
CACNB3-223ENST00000552480 KCNJ6P48051 423 aa13.92□□□□□ -0.18
CACNB3-223ENST00000552480 ADKP55263 362 aaKnown RBP13.92□□□□□ -0.18
CACNB3-223ENST00000552480 GOLGA8FQ08AF8 430 aa13.92□□□□□ -0.18
CACNB3-223ENST00000552480 GOLGA8DPQ0D2H9 430 aa13.92□□□□□ -0.18
CACNB3-223ENST00000552480 SYCP1Q15431 976 aa13.92□□□□□ -0.18
CACNB3-223ENST00000552480 RETREG2Q8NC44 543 aa13.92□□□□□ -0.18
CACNB3-223ENST00000552480 OR6J1Q8NGC5 347 aa13.92□□□□□ -0.18
CACNB3-223ENST00000552480 ASAP3Q8TDY4 903 aa13.92□□□□□ -0.18
CACNB3-223ENST00000552480 AFG1LQ8WV93 481 aa13.92□□□□□ -0.18
CACNB3-223ENST00000552480 TMEM143Q96AN5 459 aa13.92□□□□□ -0.18
CACNB3-223ENST00000552480 JPH2Q9BR39 696 aaPredicted RBP13.92□□□□□ -0.18
CACNB3-223ENST00000552480 IKZF4Q9H2S9 585 aa13.92□□□□□ -0.18
CACNB3-223ENST00000552480 CREBZFQ9NS37 354 aa13.92□□□□□ -0.18
CACNB3-223ENST00000552480 FLRT1Q9NZU1 646 aa13.92□□□□□ -0.18
CACNB3-223ENST00000552480 ARHGAP28Q9P2N2 729 aa13.92□□□□□ -0.18
CACNB3-223ENST00000552480 TRPC6Q9Y210 931 aa13.92□□□□□ -0.18
CACNB3-223ENST00000552480 MGAMO43451 1857 aa13.92□□□□□ -0.18
CACNB3-223ENST00000552480 IGKV6-21A0A0C4DH24 114 aa13.91□□□□□ -0.18
CACNB3-223ENST00000552480 ZBTB42B2RXF5 422 aa13.91□□□□□ -0.18
CACNB3-223ENST00000552480 ECM2O94769 699 aaPredicted RBP13.91□□□□□ -0.18
CACNB3-223ENST00000552480 IGHA2P01877 340 aa13.91□□□□□ -0.18
CACNB3-223ENST00000552480 CYP2B6P20813 491 aa13.91□□□□□ -0.18
CACNB3-223ENST00000552480 GLRA2P23416 452 aa13.91□□□□□ -0.18
CACNB3-223ENST00000552480 CASP4P49662 377 aa13.91□□□□□ -0.18
CACNB3-223ENST00000552480 CYP2J2P51589 502 aa13.91□□□□□ -0.18
CACNB3-223ENST00000552480 FCGRTP55899 365 aa13.91□□□□□ -0.18
CACNB3-223ENST00000552480 TNFAIP2Q03169 654 aa13.91□□□□□ -0.18
CACNB3-223ENST00000552480 DEFB115Q30KQ5 88 aa13.91□□□□□ -0.18
CACNB3-223ENST00000552480 FIGNQ5HY92 759 aa13.91□□□□□ -0.18
CACNB3-223ENST00000552480 ZNF484Q5JVG2 852 aa13.91□□□□□ -0.18
CACNB3-223ENST00000552480 IER5Q5VY09 327 aa13.91□□□□□ -0.18
CACNB3-223ENST00000552480 TMEM139Q8IV31 216 aa13.91□□□□□ -0.18
CACNB3-223ENST00000552480 FAM186BQ8IYM0 893 aa13.91□□□□□ -0.18
CACNB3-223ENST00000552480 TCP11Q8WWU5 503 aa13.91□□□□□ -0.18
CACNB3-223ENST00000552480 CAPNS2Q96L46 248 aa13.91□□□□□ -0.18
CACNB3-223ENST00000552480 KIFC3Q9BVG8 833 aa13.91□□□□□ -0.18
CACNB3-223ENST00000552480 SIK3Q9Y2K2 1263 aa13.91□□□□□ -0.18
CACNB3-223ENST00000552480 FRMD4BQ9Y2L6 1034 aa13.91□□□□□ -0.18
CACNB3-223ENST00000552480 ADGRA3Q8IWK6 1321 aa13.9□□□□□ -0.18
CACNB3-223ENST00000552480 A0A1W2PQJ5 194 aa13.9□□□□□ -0.18
CACNB3-223ENST00000552480 STX10O60499 249 aa13.9□□□□□ -0.18
CACNB3-223ENST00000552480 AOC2O75106 756 aa13.9□□□□□ -0.18
CACNB3-223ENST00000552480 PPFIA4O75335 1185 aa13.9□□□□□ -0.18
CACNB3-223ENST00000552480 MMP3P08254 477 aa13.9□□□□□ -0.18
CACNB3-223ENST00000552480 ZNF865P0CJ78 1059 aaPredicted RBP13.9□□□□□ -0.18
CACNB3-223ENST00000552480 XRCC5P13010 732 aaKnown RBP13.9□□□□□ -0.18
CACNB3-223ENST00000552480 CTGFP29279 349 aa13.9□□□□□ -0.18
CACNB3-223ENST00000552480 CLCN1P35523 988 aa13.9□□□□□ -0.18
CACNB3-223ENST00000552480 FXR1P51114 621 aaKnown RBP eCLIP13.9□□□□□ -0.18
CACNB3-223ENST00000552480 KCNH2Q12809 1159 aa13.9□□□□□ -0.18
CACNB3-223ENST00000552480 CCL14Q16627 93 aa13.9□□□□□ -0.18
CACNB3-223ENST00000552480 DEPTORQ8TB45 409 aa13.9□□□□□ -0.18
CACNB3-223ENST00000552480 CPLX3Q8WVH0 158 aa13.9□□□□□ -0.18
CACNB3-223ENST00000552480 BORCS6Q96GS4 357 aa13.9□□□□□ -0.18
CACNB3-223ENST00000552480 PCMTD1Q96MG8 357 aaPredicted RBP13.9□□□□□ -0.18
CACNB3-223ENST00000552480 BAG1Q99933 345 aaPredicted RBP13.9□□□□□ -0.18
CACNB3-223ENST00000552480 NAA15Q9BXJ9 866 aaKnown RBP13.9□□□□□ -0.18
CACNB3-223ENST00000552480 TTYH3Q9C0H2 523 aa13.9□□□□□ -0.18
CACNB3-223ENST00000552480 ZNF215Q9UL58 517 aaPredicted RBP13.9□□□□□ -0.18
CACNB3-223ENST00000552480 CAPN11Q9UMQ6 739 aa13.9□□□□□ -0.18
CACNB3-223ENST00000552480 COL1A2P08123 1366 aa13.9□□□□□ -0.18
CACNB3-223ENST00000552480 TTC26A0AVF1 554 aa13.89□□□□□ -0.19
CACNB3-223ENST00000552480 MAPK13O15264 365 aa13.89□□□□□ -0.19
CACNB3-223ENST00000552480 ARHGAP6O43182 974 aa13.89□□□□□ -0.19
CACNB3-223ENST00000552480 ADCY6O43306 1168 aa13.89□□□□□ -0.19
CACNB3-223ENST00000552480 EXOC3O60645 756 aa13.89□□□□□ -0.19
CACNB3-223ENST00000552480 AFPP02771 609 aaKnown RBP13.89□□□□□ -0.19
CACNB3-223ENST00000552480 FECHP22830 423 aa13.89□□□□□ -0.19
CACNB3-223ENST00000552480 CYP2C19P33261 490 aa13.89□□□□□ -0.19
CACNB3-223ENST00000552480 KLK7P49862 253 aa13.89□□□□□ -0.19
CACNB3-223ENST00000552480 APLP1P51693 650 aa13.89□□□□□ -0.19
CACNB3-223ENST00000552480 LACTBP83111 547 aaPredicted RBP13.89□□□□□ -0.19
CACNB3-223ENST00000552480 NOLC1Q14978 699 aaKnown RBP eCLIP13.89□□□□□ -0.19
CACNB3-223ENST00000552480 DGKDQ16760 1214 aa13.89□□□□□ -0.19
CACNB3-223ENST00000552480 PRAMEF19Q5SWL8 479 aa13.89□□□□□ -0.19
CACNB3-223ENST00000552480 TAS1R3Q7RTX0 852 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms