RNA–Protein interactions for RNA: ENST00000550584.6

PPFIA2-220, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 5,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-220ENST00000550584 CHN2P52757 468 aa9.35□□□□□ -0.91
PPFIA2-220ENST00000550584 SEC24CP53992 1094 aa9.35□□□□□ -0.91
PPFIA2-220ENST00000550584 POLGP54098 1239 aaPredicted RBP9.35□□□□□ -0.91
PPFIA2-220ENST00000550584 GRIK3Q13003 919 aa9.35□□□□□ -0.91
PPFIA2-220ENST00000550584 DNAJC3Q13217 504 aa9.35□□□□□ -0.91
PPFIA2-220ENST00000550584 SNX30Q5VWJ9 437 aa9.35□□□□□ -0.91
PPFIA2-220ENST00000550584 ZFP1Q6P2D0 407 aa9.35□□□□□ -0.91
PPFIA2-220ENST00000550584 CYFIP1Q7L576 1253 aa9.35□□□□□ -0.91
PPFIA2-220ENST00000550584 SH2D3CQ8N5H7 860 aa9.35□□□□□ -0.91
PPFIA2-220ENST00000550584 OTUD7AQ8TE49 926 aaPredicted RBP9.35□□□□□ -0.91
PPFIA2-220ENST00000550584 CCDC85AQ96PX6 553 aaPredicted RBP9.35□□□□□ -0.91
PPFIA2-220ENST00000550584 GINS4Q9BRT9 223 aa9.35□□□□□ -0.91
PPFIA2-220ENST00000550584 FBXO9Q9UK97 447 aaPredicted RBP9.35□□□□□ -0.91
PPFIA2-220ENST00000550584 POTECB2RU33 542 aa9.34□□□□□ -0.91
PPFIA2-220ENST00000550584 TRAPPC3O43617 180 aa9.34□□□□□ -0.91
PPFIA2-220ENST00000550584 SMNDC1O75940 238 aaKnown RBP eCLIP9.34□□□□□ -0.91
PPFIA2-220ENST00000550584 BCL10O95999 233 aa9.34□□□□□ -0.91
PPFIA2-220ENST00000550584 PYGMP11217 842 aa9.34□□□□□ -0.91
PPFIA2-220ENST00000550584 NT5C2P49902 561 aa9.34□□□□□ -0.91
PPFIA2-220ENST00000550584 ARL4CP56559 192 aa9.34□□□□□ -0.91
PPFIA2-220ENST00000550584 THOC5Q13769 683 aaKnown RBP9.34□□□□□ -0.91
PPFIA2-220ENST00000550584 PM20D2Q8IYS1 436 aa9.34□□□□□ -0.91
PPFIA2-220ENST00000550584 KBTBD3Q8NAB2 608 aa9.34□□□□□ -0.91
PPFIA2-220ENST00000550584 LINS1Q8NG48 757 aa9.34□□□□□ -0.91
PPFIA2-220ENST00000550584 UHMK1Q8TAS1 419 aaKnown RBP9.34□□□□□ -0.91
PPFIA2-220ENST00000550584 PTTG2Q9NZH5 202 aa9.34□□□□□ -0.91
PPFIA2-220ENST00000550584 CES2O00748 559 aa9.34□□□□□ -0.91
PPFIA2-220ENST00000550584 GSTA4O15217 222 aa9.34□□□□□ -0.91
PPFIA2-220ENST00000550584 IDH3BO43837 385 aa9.34□□□□□ -0.91
PPFIA2-220ENST00000550584 TBC1D4O60343 1298 aa9.34□□□□□ -0.91
PPFIA2-220ENST00000550584 RBM5P52756 815 aaKnown RBP eCLIP9.34□□□□□ -0.91
PPFIA2-220ENST00000550584 SGSM1Q2NKQ1 1148 aa9.34□□□□□ -0.91
PPFIA2-220ENST00000550584 IZUMO2Q6UXV1 221 aa9.34□□□□□ -0.91
PPFIA2-220ENST00000550584 FAM47EQ6ZV65 393 aa9.34□□□□□ -0.91
PPFIA2-220ENST00000550584 RAB44Q7Z6P3 723 aaPredicted RBP9.34□□□□□ -0.91
PPFIA2-220ENST00000550584 ADSSL1Q8N142 457 aa9.34□□□□□ -0.91
PPFIA2-220ENST00000550584 PROM2Q8N271 834 aa9.34□□□□□ -0.91
PPFIA2-220ENST00000550584 GCOM2Q9BZD3 368 aaPredicted RBP9.34□□□□□ -0.91
PPFIA2-220ENST00000550584 SAMSN1Q9NSI8 373 aaKnown RBP9.34□□□□□ -0.91
PPFIA2-220ENST00000550584 SYNJ2O15056 1496 aa9.34□□□□□ -0.91
PPFIA2-220ENST00000550584 PTCH1Q13635 1447 aa9.34□□□□□ -0.91
PPFIA2-220ENST00000550584 RIMS2Q9UQ26 1411 aa9.34□□□□□ -0.91
PPFIA2-220ENST00000550584 EIF4E1BA6NMX2 242 aaKnown RBP9.34□□□□□ -0.91
PPFIA2-220ENST00000550584 E7EWF7 191 aa9.34□□□□□ -0.91
PPFIA2-220ENST00000550584 FTCDO95954 541 aa9.34□□□□□ -0.91
PPFIA2-220ENST00000550584 PPP2R5CQ13362 524 aa9.34□□□□□ -0.91
PPFIA2-220ENST00000550584 ANGPT1Q15389 498 aa9.34□□□□□ -0.91
PPFIA2-220ENST00000550584 ARMCX4Q5H9R4 360 aa9.34□□□□□ -0.91
PPFIA2-220ENST00000550584 ARMC3Q5W041 872 aa9.34□□□□□ -0.91
PPFIA2-220ENST00000550584 RINT1Q6NUQ1 792 aa9.34□□□□□ -0.91
PPFIA2-220ENST00000550584 NFRKBQ6P4R8 1299 aa9.34□□□□□ -0.91
PPFIA2-220ENST00000550584 SFR1Q86XK3 245 aa9.34□□□□□ -0.91
PPFIA2-220ENST00000550584 LRRC34Q8IZ02 419 aa9.34□□□□□ -0.91
PPFIA2-220ENST00000550584 STAG2Q8N3U4 1231 aa9.34□□□□□ -0.91
PPFIA2-220ENST00000550584 DEPDC7Q96QD5 511 aa9.34□□□□□ -0.91
PPFIA2-220ENST00000550584 NOP56O00567 594 aaKnown RBP9.34□□□□□ -0.91
PPFIA2-220ENST00000550584 TRIM24O15164 1050 aa9.34□□□□□ -0.91
PPFIA2-220ENST00000550584 TNNC2P02585 160 aa9.34□□□□□ -0.91
PPFIA2-220ENST00000550584 ATP1A3P13637 1013 aa9.34□□□□□ -0.91
PPFIA2-220ENST00000550584 PRAM1Q96QH2 718 aa9.34□□□□□ -0.91
PPFIA2-220ENST00000550584 PAGR1Q9BTK6 254 aa9.34□□□□□ -0.91
PPFIA2-220ENST00000550584 MRPL1Q9BYD6 325 aaKnown RBP9.34□□□□□ -0.91
PPFIA2-220ENST00000550584 SEL1LQ9UBV2 794 aa9.34□□□□□ -0.91
PPFIA2-220ENST00000550584 ATPIF1Q9UII2 106 aa9.34□□□□□ -0.91
PPFIA2-220ENST00000550584 SCAF8Q9UPN6 1271 aaKnown RBP9.34□□□□□ -0.91
PPFIA2-220ENST00000550584 GPC6Q9Y625 555 aaPredicted RBP9.34□□□□□ -0.91
PPFIA2-220ENST00000550584 SSU72P8A0A1W2PR75 194 aa9.34□□□□□ -0.92
PPFIA2-220ENST00000550584 GNB5O14775 395 aa9.34□□□□□ -0.92
PPFIA2-220ENST00000550584 STK4Q13043 487 aa9.34□□□□□ -0.92
PPFIA2-220ENST00000550584 TTC33Q6PID6 262 aaPredicted RBP9.34□□□□□ -0.92
PPFIA2-220ENST00000550584 APPBP2Q92624 585 aa9.34□□□□□ -0.92
PPFIA2-220ENST00000550584 APBB2Q92870 758 aa9.34□□□□□ -0.92
PPFIA2-220ENST00000550584 FUCA2Q9BTY2 467 aa9.34□□□□□ -0.92
PPFIA2-220ENST00000550584 WDR12Q9GZL7 423 aaKnown RBP9.34□□□□□ -0.92
PPFIA2-220ENST00000550584 SMYD3Q9H7B4 428 aa9.34□□□□□ -0.92
PPFIA2-220ENST00000550584 SLC52A1Q9NWF4 448 aa9.34□□□□□ -0.92
PPFIA2-220ENST00000550584 HERC5Q9UII4 1024 aaKnown RBP9.34□□□□□ -0.92
PPFIA2-220ENST00000550584 DSEQ9UL01 958 aa9.34□□□□□ -0.92
PPFIA2-220ENST00000550584 KDM5CP41229 1560 aa9.33□□□□□ -0.92
PPFIA2-220ENST00000550584 WDR19Q8NEZ3 1342 aa9.33□□□□□ -0.92
PPFIA2-220ENST00000550584 A0A087WXM4 84 aa9.33□□□□□ -0.92
PPFIA2-220ENST00000550584 SASH3O75995 380 aa9.33□□□□□ -0.92
PPFIA2-220ENST00000550584 ITIH2P19823 946 aa9.33□□□□□ -0.92
PPFIA2-220ENST00000550584 IL12AP29459 219 aa9.33□□□□□ -0.92
PPFIA2-220ENST00000550584 EXOC3L4Q17RC7 722 aa9.33□□□□□ -0.92
PPFIA2-220ENST00000550584 SCUBE1Q8IWY4 988 aa9.33□□□□□ -0.92
PPFIA2-220ENST00000550584 AENQ8WTP8 325 aaKnown RBP9.33□□□□□ -0.92
PPFIA2-220ENST00000550584 KIFC2Q96AC6 838 aa9.33□□□□□ -0.92
PPFIA2-220ENST00000550584 PGBD1Q96JS3 809 aa9.33□□□□□ -0.92
PPFIA2-220ENST00000550584 PLEKHG4BQ96PX9 1271 aa9.33□□□□□ -0.92
PPFIA2-220ENST00000550584 RPS6KC1Q96S38 1066 aa9.33□□□□□ -0.92
PPFIA2-220ENST00000550584 PAIP1Q9H074 479 aaKnown RBP9.33□□□□□ -0.92
PPFIA2-220ENST00000550584 DCDC2Q9UHG0 476 aa9.33□□□□□ -0.92
PPFIA2-220ENST00000550584 SRGAP2O75044 1071 aa9.33□□□□□ -0.92
PPFIA2-220ENST00000550584 ZC3H11AO75152 810 aaKnown RBP eCLIP9.33□□□□□ -0.92
PPFIA2-220ENST00000550584 SOX6P35712 828 aa9.33□□□□□ -0.92
PPFIA2-220ENST00000550584 YWHAGP61981 247 aaKnown RBP eCLIP9.33□□□□□ -0.92
PPFIA2-220ENST00000550584 GRM1Q13255 1194 aa9.33□□□□□ -0.92
PPFIA2-220ENST00000550584 ZNF846Q147U1 533 aa9.33□□□□□ -0.92
PPFIA2-220ENST00000550584 PLEKHA7Q6IQ23 1121 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms