RNA–Protein interactions for RNA: ENST00000549220.5

EFCAB2-215, Transcript of EF-hand calcium binding domain 2, humanhuman

TSL 4

Gene EFCAB2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB2-215ENST00000549220 HTTP42858 3142 aa6.83□□□□□ -1.32
EFCAB2-215ENST00000549220 MYH9P35579 1960 aaKnown RBP6.82□□□□□ -1.32
EFCAB2-215ENST00000549220 ADCY3O60266 1144 aa6.82□□□□□ -1.32
EFCAB2-215ENST00000549220 GADD45BO75293 160 aaPredicted RBP6.82□□□□□ -1.32
EFCAB2-215ENST00000549220 LEFTY1O75610 366 aa6.82□□□□□ -1.32
EFCAB2-215ENST00000549220 PGK2P07205 417 aa6.82□□□□□ -1.32
EFCAB2-215ENST00000549220 CASTP20810 708 aaKnown RBP6.82□□□□□ -1.32
EFCAB2-215ENST00000549220 MAPK4P31152 587 aa6.82□□□□□ -1.32
EFCAB2-215ENST00000549220 STAT3P40763 770 aa6.82□□□□□ -1.32
EFCAB2-215ENST00000549220 ZNF543Q08ER8 600 aa6.82□□□□□ -1.32
EFCAB2-215ENST00000549220 TTLL4Q14679 1199 aa6.82□□□□□ -1.32
EFCAB2-215ENST00000549220 SEC23AQ15436 765 aa6.82□□□□□ -1.32
EFCAB2-215ENST00000549220 ENOX2Q16206 610 aaKnown RBP6.82□□□□□ -1.32
EFCAB2-215ENST00000549220 USH1GQ495M9 461 aa6.82□□□□□ -1.32
EFCAB2-215ENST00000549220 SYDE2Q5VT97 1194 aa6.82□□□□□ -1.32
EFCAB2-215ENST00000549220 BLOC1S2Q6QNY1 142 aa6.82□□□□□ -1.32
EFCAB2-215ENST00000549220 NOL8Q76FK4 1167 aaKnown RBP6.82□□□□□ -1.32
EFCAB2-215ENST00000549220 CATIPQ7Z7H3 387 aa6.82□□□□□ -1.32
EFCAB2-215ENST00000549220 DPP9Q86TI2 863 aa6.82□□□□□ -1.32
EFCAB2-215ENST00000549220 FAM160B2Q86V87 743 aa6.82□□□□□ -1.32
EFCAB2-215ENST00000549220 MICU3Q86XE3 530 aa6.82□□□□□ -1.32
EFCAB2-215ENST00000549220 DGKHQ86XP1 1220 aa6.82□□□□□ -1.32
EFCAB2-215ENST00000549220 HOMER1Q86YM7 354 aa6.82□□□□□ -1.32
EFCAB2-215ENST00000549220 MB21D1Q8N884 522 aa6.82□□□□□ -1.32
EFCAB2-215ENST00000549220 TTC14Q96N46 770 aa6.82□□□□□ -1.32
EFCAB2-215ENST00000549220 MMP19Q99542 508 aa6.82□□□□□ -1.32
EFCAB2-215ENST00000549220 LRRC4CQ9HCJ2 640 aa6.82□□□□□ -1.32
EFCAB2-215ENST00000549220 TMEM39AQ9NV64 488 aa6.82□□□□□ -1.32
EFCAB2-215ENST00000549220 CCPG1Q9ULG6 757 aa6.82□□□□□ -1.32
EFCAB2-215ENST00000549220 PLAGL2Q9UPG8 496 aa6.82□□□□□ -1.32
EFCAB2-215ENST00000549220 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.82□□□□□ -1.32
EFCAB2-215ENST00000549220 PDE4DIPQ5VU43 2346 aa6.81□□□□□ -1.32
EFCAB2-215ENST00000549220 TRIP12Q14669 1992 aaPredicted RBP6.81□□□□□ -1.32
EFCAB2-215ENST00000549220 SH2B2O14492 632 aaPredicted RBP6.81□□□□□ -1.32
EFCAB2-215ENST00000549220 FCER1AP12319 257 aa6.81□□□□□ -1.32
EFCAB2-215ENST00000549220 BMP6P22004 513 aa6.81□□□□□ -1.32
EFCAB2-215ENST00000549220 ADORA2AP29274 412 aa6.81□□□□□ -1.32
EFCAB2-215ENST00000549220 GRK4P32298 578 aa6.81□□□□□ -1.32
EFCAB2-215ENST00000549220 HSPA4P34932 840 aa6.81□□□□□ -1.32
EFCAB2-215ENST00000549220 APOBRQ0VD83 1088 aa6.81□□□□□ -1.32
EFCAB2-215ENST00000549220 BNIP3Q12983 259 aa6.81□□□□□ -1.32
EFCAB2-215ENST00000549220 KRT32Q14532 448 aa6.81□□□□□ -1.32
EFCAB2-215ENST00000549220 PKN2Q16513 984 aaKnown RBP6.81□□□□□ -1.32
EFCAB2-215ENST00000549220 CCL14Q16627 93 aa6.81□□□□□ -1.32
EFCAB2-215ENST00000549220 OGFOD2Q6N063 350 aa6.81□□□□□ -1.32
EFCAB2-215ENST00000549220 NXPE4Q6UWF7 544 aa6.81□□□□□ -1.32
EFCAB2-215ENST00000549220 NSMFQ6X4W1 530 aa6.81□□□□□ -1.32
EFCAB2-215ENST00000549220 Q6ZUG5 572 aa6.81□□□□□ -1.32
EFCAB2-215ENST00000549220 ZNF654Q8IZM8 581 aa6.81□□□□□ -1.32
EFCAB2-215ENST00000549220 PLD6Q8N2A8 252 aaKnown RBP6.81□□□□□ -1.32
EFCAB2-215ENST00000549220 CTCFLQ8NI51 663 aaPredicted RBP6.81□□□□□ -1.32
EFCAB2-215ENST00000549220 IGDCC4Q8TDY8 1250 aa6.81□□□□□ -1.32
EFCAB2-215ENST00000549220 DDX11Q96FC9 970 aa6.81□□□□□ -1.32
EFCAB2-215ENST00000549220 TEX13BQ9BXU2 312 aa6.81□□□□□ -1.32
EFCAB2-215ENST00000549220 UPF3BQ9BZI7 483 aaKnown RBP6.81□□□□□ -1.32
EFCAB2-215ENST00000549220 LY9Q9HBG7 655 aa6.81□□□□□ -1.32
EFCAB2-215ENST00000549220 SLC38A10Q9HBR0 1119 aa6.81□□□□□ -1.32
EFCAB2-215ENST00000549220 RNF146Q9NTX7 359 aa6.81□□□□□ -1.32
EFCAB2-215ENST00000549220 SYNPO2Q9UMS6 1093 aa6.81□□□□□ -1.32
EFCAB2-215ENST00000549220 RIPK3Q9Y572 518 aa6.81□□□□□ -1.32
EFCAB2-215ENST00000549220 LOXHD1Q8IVV2 1947 aa6.8□□□□□ -1.32
EFCAB2-215ENST00000549220 KLF18A0A0U1RQI7 1052 aa6.8□□□□□ -1.32
EFCAB2-215ENST00000549220 hCG_1642624A0A1W2PR95 340 aa6.8□□□□□ -1.32
EFCAB2-215ENST00000549220 PTPDC1A2A3K4 754 aa6.8□□□□□ -1.32
EFCAB2-215ENST00000549220 SLC15A5A6NIM6 579 aa6.8□□□□□ -1.32
EFCAB2-215ENST00000549220 KLRF2D3W0D1 207 aa6.8□□□□□ -1.32
EFCAB2-215ENST00000549220 SLC25A27O95847 323 aa6.8□□□□□ -1.32
EFCAB2-215ENST00000549220 FAM87AP0C7U9 286 aa6.8□□□□□ -1.32
EFCAB2-215ENST00000549220 ARNTP27540 789 aa6.8□□□□□ -1.32
EFCAB2-215ENST00000549220 CNGA1P29973 690 aa6.8□□□□□ -1.32
EFCAB2-215ENST00000549220 RGS2P41220 211 aa6.8□□□□□ -1.32
EFCAB2-215ENST00000549220 NOVP48745 357 aa6.8□□□□□ -1.32
EFCAB2-215ENST00000549220 PRMT2P55345 433 aa6.8□□□□□ -1.32
EFCAB2-215ENST00000549220 OXCT1P55809 520 aa6.8□□□□□ -1.32
EFCAB2-215ENST00000549220 KCTD2Q14681 263 aa6.8□□□□□ -1.32
EFCAB2-215ENST00000549220 GRM4Q14833 912 aa6.8□□□□□ -1.32
EFCAB2-215ENST00000549220 CDC37Q16543 378 aaPredicted RBP6.8□□□□□ -1.32
EFCAB2-215ENST00000549220 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.8□□□□□ -1.32
EFCAB2-215ENST00000549220 ASPRV1Q53RT3 343 aa6.8□□□□□ -1.32
EFCAB2-215ENST00000549220 MUM1L1Q5H9M0 696 aa6.8□□□□□ -1.32
EFCAB2-215ENST00000549220 GPATCH4Q5T3I0 446 aaKnown RBP6.8□□□□□ -1.32
EFCAB2-215ENST00000549220 SYNE3Q6ZMZ3 975 aa6.8□□□□□ -1.32
EFCAB2-215ENST00000549220 UBE3DQ7Z6J8 389 aa6.8□□□□□ -1.32
EFCAB2-215ENST00000549220 RIOX2Q8IUF8 465 aa6.8□□□□□ -1.32
EFCAB2-215ENST00000549220 TP53INP2Q8IXH6 220 aa6.8□□□□□ -1.32
EFCAB2-215ENST00000549220 SMYD4Q8IYR2 804 aaPredicted RBP6.8□□□□□ -1.32
EFCAB2-215ENST00000549220 ADGRF4Q8IZF3 695 aa6.8□□□□□ -1.32
EFCAB2-215ENST00000549220 ANKRD35Q8N283 1001 aa6.8□□□□□ -1.32
EFCAB2-215ENST00000549220 FAM181AQ8N9Y4 354 aa6.8□□□□□ -1.32
EFCAB2-215ENST00000549220 FLCNQ8NFG4 579 aa6.8□□□□□ -1.32
EFCAB2-215ENST00000549220 REPS2Q8NFH8 660 aa6.8□□□□□ -1.32
EFCAB2-215ENST00000549220 NPLOC4Q8TAT6 608 aa6.8□□□□□ -1.32
EFCAB2-215ENST00000549220 SOCS4Q8WXH5 440 aa6.8□□□□□ -1.32
EFCAB2-215ENST00000549220 TRIB2Q92519 343 aa6.8□□□□□ -1.32
EFCAB2-215ENST00000549220 BRF1Q92994 677 aa6.8□□□□□ -1.32
EFCAB2-215ENST00000549220 ISL2Q96A47 359 aa6.8□□□□□ -1.32
EFCAB2-215ENST00000549220 TMEM87BQ96K49 555 aa6.8□□□□□ -1.32
EFCAB2-215ENST00000549220 HEXIM2Q96MH2 286 aaKnown RBP6.8□□□□□ -1.32
EFCAB2-215ENST00000549220 NECAB3Q96P71 396 aaPredicted RBP6.8□□□□□ -1.32
EFCAB2-215ENST00000549220 DUSP23Q9BVJ7 150 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms