RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 IGKV6-21A0A0C4DH24 114 aa14.47□□□□□ -0.09
PTCH1-218ENST00000548945 HIDE1A8MVS5 230 aa14.47□□□□□ -0.09
PTCH1-218ENST00000548945 EPB41L2O43491 1005 aaKnown RBP14.47□□□□□ -0.09
PTCH1-218ENST00000548945 CHMP2AO43633 222 aa14.47□□□□□ -0.09
PTCH1-218ENST00000548945 SKIP12755 728 aa14.47□□□□□ -0.09
PTCH1-218ENST00000548945 DNM2P50570 870 aa14.47□□□□□ -0.09
PTCH1-218ENST00000548945 SMC1AQ14683 1233 aaKnown RBP14.47□□□□□ -0.09
PTCH1-218ENST00000548945 BMS1Q14692 1282 aaKnown RBP14.47□□□□□ -0.09
PTCH1-218ENST00000548945 TPRNQ4KMQ1 711 aa14.47□□□□□ -0.09
PTCH1-218ENST00000548945 ERICH6BQ5W0A0 696 aa14.47□□□□□ -0.09
PTCH1-218ENST00000548945 MOXD1Q6UVY6 613 aa14.47□□□□□ -0.09
PTCH1-218ENST00000548945 B3GNT9Q6UX72 402 aa14.47□□□□□ -0.09
PTCH1-218ENST00000548945 SUGP1Q8IWZ8 645 aaKnown RBP14.47□□□□□ -0.09
PTCH1-218ENST00000548945 SLC39A11Q8N1S5 342 aa14.47□□□□□ -0.09
PTCH1-218ENST00000548945 FBXL6Q8N531 539 aa14.47□□□□□ -0.09
PTCH1-218ENST00000548945 MRPL43Q8N983 215 aaKnown RBP14.47□□□□□ -0.09
PTCH1-218ENST00000548945 TBCKQ8TEA7 893 aa14.47□□□□□ -0.09
PTCH1-218ENST00000548945 MBOAT7Q96N66 472 aa14.47□□□□□ -0.09
PTCH1-218ENST00000548945 PCDHA4Q9UN74 947 aa14.47□□□□□ -0.09
PTCH1-218ENST00000548945 C2orf71A6NGG8 1288 aa14.46□□□□□ -0.09
PTCH1-218ENST00000548945 M0R2N6 131 aa14.46□□□□□ -0.09
PTCH1-218ENST00000548945 SFPQP23246 707 aaKnown RBP eCLIP14.46□□□□□ -0.09
PTCH1-218ENST00000548945 ALDH7A1P49419 539 aaKnown RBP14.46□□□□□ -0.09
PTCH1-218ENST00000548945 PTPN5P54829 565 aa14.46□□□□□ -0.09
PTCH1-218ENST00000548945 ITIH3Q06033 890 aa14.46□□□□□ -0.09
PTCH1-218ENST00000548945 PTPN21Q16825 1174 aa14.46□□□□□ -0.09
PTCH1-218ENST00000548945 GALNT17Q6IS24 598 aa14.46□□□□□ -0.09
PTCH1-218ENST00000548945 MIER3Q7Z3K6 550 aa14.46□□□□□ -0.09
PTCH1-218ENST00000548945 ZNF410Q86VK4 478 aa14.46□□□□□ -0.09
PTCH1-218ENST00000548945 DAGLBQ8NCG7 672 aa14.46□□□□□ -0.09
PTCH1-218ENST00000548945 RNF169Q8NCN4 708 aa14.46□□□□□ -0.09
PTCH1-218ENST00000548945 HELQQ8TDG4 1101 aa14.46□□□□□ -0.09
PTCH1-218ENST00000548945 NECTIN4Q96NY8 510 aa14.46□□□□□ -0.09
PTCH1-218ENST00000548945 CEP89Q96ST8 783 aa14.46□□□□□ -0.09
PTCH1-218ENST00000548945 JPH2Q9BR39 696 aaPredicted RBP14.46□□□□□ -0.09
PTCH1-218ENST00000548945 INO80BQ9C086 356 aaPredicted RBP14.46□□□□□ -0.09
PTCH1-218ENST00000548945 NCOA5Q9HCD5 579 aaKnown RBP14.46□□□□□ -0.09
PTCH1-218ENST00000548945 SEPT9Q9UHD8 586 aaPredicted RBP14.46□□□□□ -0.09
PTCH1-218ENST00000548945 NR2E1Q9Y466 385 aa14.46□□□□□ -0.09
PTCH1-218ENST00000548945 CFAP54Q96N23 3096 aa14.45□□□□□ -0.1
PTCH1-218ENST00000548945 STBD1O95210 358 aa14.45□□□□□ -0.1
PTCH1-218ENST00000548945 DEXIO95424 95 aa14.45□□□□□ -0.1
PTCH1-218ENST00000548945 PBX3P40426 434 aa14.45□□□□□ -0.1
PTCH1-218ENST00000548945 PHKA2P46019 1235 aa14.45□□□□□ -0.1
PTCH1-218ENST00000548945 BCAR1P56945 870 aa14.45□□□□□ -0.1
PTCH1-218ENST00000548945 CCT2P78371 535 aaKnown RBP14.45□□□□□ -0.1
PTCH1-218ENST00000548945 SSRP1Q08945 709 aaKnown RBP14.45□□□□□ -0.1
PTCH1-218ENST00000548945 MTERF2Q49AM1 385 aa14.45□□□□□ -0.1
PTCH1-218ENST00000548945 RIF1Q5UIP0 2472 aaKnown RBP14.45□□□□□ -0.1
PTCH1-218ENST00000548945 CES5AQ6NT32 575 aa14.45□□□□□ -0.1
PTCH1-218ENST00000548945 LLGL2Q6P1M3 1020 aa14.45□□□□□ -0.1
PTCH1-218ENST00000548945 RUFY3Q7L099 469 aa14.45□□□□□ -0.1
PTCH1-218ENST00000548945 BLIDQ8IZY5 108 aa14.45□□□□□ -0.1
PTCH1-218ENST00000548945 ETNPPLQ8TBG4 499 aa14.45□□□□□ -0.1
PTCH1-218ENST00000548945 ASIC4Q96FT7 647 aa14.45□□□□□ -0.1
PTCH1-218ENST00000548945 ZNF274Q96GC6 653 aaPredicted RBP14.45□□□□□ -0.1
PTCH1-218ENST00000548945 TMEM169Q96HH4 297 aa14.45□□□□□ -0.1
PTCH1-218ENST00000548945 ZNF668Q96K58 619 aaPredicted RBP14.45□□□□□ -0.1
PTCH1-218ENST00000548945 ADAM7Q9H2U9 754 aa14.45□□□□□ -0.1
PTCH1-218ENST00000548945 HCFC2Q9Y5Z7 792 aa14.45□□□□□ -0.1
PTCH1-218ENST00000548945 IRAK3Q9Y616 596 aa14.45□□□□□ -0.1
PTCH1-218ENST00000548945 ZNF623O75123 536 aa14.44□□□□□ -0.1
PTCH1-218ENST00000548945 MAFO75444 373 aaPredicted RBP14.44□□□□□ -0.1
PTCH1-218ENST00000548945 TDP2O95551 362 aa14.44□□□□□ -0.1
PTCH1-218ENST00000548945 FGFR4P22455 802 aa14.44□□□□□ -0.1
PTCH1-218ENST00000548945 RAB27AP51159 221 aa14.44□□□□□ -0.1
PTCH1-218ENST00000548945 POLGP54098 1239 aaPredicted RBP14.44□□□□□ -0.1
PTCH1-218ENST00000548945 DRP2Q13474 957 aa14.44□□□□□ -0.1
PTCH1-218ENST00000548945 TOB2Q14106 344 aaPredicted RBP14.44□□□□□ -0.1
PTCH1-218ENST00000548945 GIT2Q14161 759 aa14.44□□□□□ -0.1
PTCH1-218ENST00000548945 EXOC8Q8IYI6 725 aa14.44□□□□□ -0.1
PTCH1-218ENST00000548945 PRSS33Q8NF86 280 aa14.44□□□□□ -0.1
PTCH1-218ENST00000548945 ZSWIM6Q9HCJ5 1215 aa14.44□□□□□ -0.1
PTCH1-218ENST00000548945 DZANK1Q9NVP4 752 aa14.44□□□□□ -0.1
PTCH1-218ENST00000548945 STK39Q9UEW8 545 aa14.44□□□□□ -0.1
PTCH1-218ENST00000548945 PPME1Q9Y570 386 aa14.44□□□□□ -0.1
PTCH1-218ENST00000548945 SPTBN4Q9H254 2564 aa14.43□□□□□ -0.1
PTCH1-218ENST00000548945 A0A087WZ62 844 aa14.43□□□□□ -0.1
PTCH1-218ENST00000548945 CPLX1O14810 134 aa14.43□□□□□ -0.1
PTCH1-218ENST00000548945 CLASP2O75122 1294 aaKnown RBP14.43□□□□□ -0.1
PTCH1-218ENST00000548945 CSDE1O75534 798 aaKnown RBP14.43□□□□□ -0.1
PTCH1-218ENST00000548945 MTHFRP42898 656 aa14.43□□□□□ -0.1
PTCH1-218ENST00000548945 NUBP1P53384 320 aa14.43□□□□□ -0.1
PTCH1-218ENST00000548945 PSMC5P62195 406 aa14.43□□□□□ -0.1
PTCH1-218ENST00000548945 NONOQ15233 471 aaKnown RBP eCLIP14.43□□□□□ -0.1
PTCH1-218ENST00000548945 NPY5RQ15761 445 aa14.43□□□□□ -0.1
PTCH1-218ENST00000548945 IER5LQ5T953 404 aa14.43□□□□□ -0.1
PTCH1-218ENST00000548945 TWF2Q6IBS0 349 aaKnown RBP14.43□□□□□ -0.1
PTCH1-218ENST00000548945 CPLX2Q6PUV4 134 aaKnown RBP14.43□□□□□ -0.1
PTCH1-218ENST00000548945 GLB1LQ6UWU2 654 aa14.43□□□□□ -0.1
PTCH1-218ENST00000548945 UBALD2Q8IYN6 164 aa14.43□□□□□ -0.1
PTCH1-218ENST00000548945 GJA10Q969M2 543 aa14.43□□□□□ -0.1
PTCH1-218ENST00000548945 FDXACB1Q9BRP7 624 aaPredicted RBP14.43□□□□□ -0.1
PTCH1-218ENST00000548945 TM6SF1Q9BZW5 370 aa14.43□□□□□ -0.1
PTCH1-218ENST00000548945 IRF2BPLQ9H1B7 796 aa14.43□□□□□ -0.1
PTCH1-218ENST00000548945 SUCLA2Q9P2R7 463 aaPredicted RBP14.43□□□□□ -0.1
PTCH1-218ENST00000548945 CYP46A1Q9Y6A2 500 aa14.43□□□□□ -0.1
PTCH1-218ENST00000548945 PTPRZ1P23471 2315 aaPredicted RBP14.43□□□□□ -0.1
PTCH1-218ENST00000548945 VPS13AQ96RL7 3174 aa14.42□□□□□ -0.1
PTCH1-218ENST00000548945 DENND4AQ7Z401 1863 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms