RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 TSGA10Q9BZW7 698 aa13.85□□□□□ -0.19
SCAF11-209ENST00000547018 AS3MTQ9HBK9 375 aa13.85□□□□□ -0.19
SCAF11-209ENST00000547018 METTL14Q9HCE5 456 aaKnown RBP13.85□□□□□ -0.19
SCAF11-209ENST00000547018 OSGEPQ9NPF4 335 aa13.85□□□□□ -0.19
SCAF11-209ENST00000547018 TAS2R14Q9NYV8 317 aa13.85□□□□□ -0.19
SCAF11-209ENST00000547018 SNX12Q9UMY4 172 aa13.85□□□□□ -0.19
SCAF11-209ENST00000547018 POLR2AP24928 1970 aaKnown RBP13.85□□□□□ -0.19
SCAF11-209ENST00000547018 ZMYM2Q9UBW7 1377 aa13.84□□□□□ -0.19
SCAF11-209ENST00000547018 WDR64B1ANS9 1081 aa13.84□□□□□ -0.19
SCAF11-209ENST00000547018 COPB2P35606 906 aa13.84□□□□□ -0.19
SCAF11-209ENST00000547018 PPP3CAQ08209 521 aa13.84□□□□□ -0.19
SCAF11-209ENST00000547018 MAPK7Q13164 816 aa13.84□□□□□ -0.19
SCAF11-209ENST00000547018 TMEM132AQ24JP5 1023 aa13.84□□□□□ -0.19
SCAF11-209ENST00000547018 COBLL1Q53SF7 1204 aa13.84□□□□□ -0.19
SCAF11-209ENST00000547018 ANO5Q75V66 913 aa13.84□□□□□ -0.19
SCAF11-209ENST00000547018 MTMR14Q8NCE2 650 aa13.84□□□□□ -0.19
SCAF11-209ENST00000547018 ZNF526Q8TF50 670 aaPredicted RBP13.84□□□□□ -0.19
SCAF11-209ENST00000547018 SLC20A1Q8WUM9 679 aa13.84□□□□□ -0.19
SCAF11-209ENST00000547018 INTS2Q9H0H0 1204 aaKnown RBP13.84□□□□□ -0.19
SCAF11-209ENST00000547018 CENPHQ9H3R5 247 aa13.84□□□□□ -0.19
SCAF11-209ENST00000547018 PLCB1Q9NQ66 1216 aa13.84□□□□□ -0.19
SCAF11-209ENST00000547018 RBM12Q9NTZ6 932 aaKnown RBP13.84□□□□□ -0.19
SCAF11-209ENST00000547018 KRT5P13647 590 aa13.84□□□□□ -0.19
SCAF11-209ENST00000547018 TNFAIP3P21580 790 aa13.84□□□□□ -0.19
SCAF11-209ENST00000547018 ACOT2P49753 483 aa13.84□□□□□ -0.19
SCAF11-209ENST00000547018 GUCY2FP51841 1108 aa13.84□□□□□ -0.19
SCAF11-209ENST00000547018 SEMA3FQ13275 785 aa13.84□□□□□ -0.19
SCAF11-209ENST00000547018 VGLL4Q14135 290 aa13.84□□□□□ -0.19
SCAF11-209ENST00000547018 PCNX4Q63HM2 1172 aa13.84□□□□□ -0.19
SCAF11-209ENST00000547018 KRT12Q99456 494 aa13.84□□□□□ -0.19
SCAF11-209ENST00000547018 OLFML3Q9NRN5 406 aa13.84□□□□□ -0.19
SCAF11-209ENST00000547018 HSPBP1Q9NZL4 362 aa13.84□□□□□ -0.19
SCAF11-209ENST00000547018 ZNF862O60290 1169 aa13.84□□□□□ -0.19
SCAF11-209ENST00000547018 CCND2P30279 289 aa13.84□□□□□ -0.19
SCAF11-209ENST00000547018 ZNF280AP59817 542 aaPredicted RBP13.84□□□□□ -0.19
SCAF11-209ENST00000547018 VPS36Q86VN1 386 aa13.84□□□□□ -0.19
SCAF11-209ENST00000547018 TRIM50Q86XT4 487 aa13.84□□□□□ -0.19
SCAF11-209ENST00000547018 CCDC60Q8IWA6 550 aaPredicted RBP13.84□□□□□ -0.19
SCAF11-209ENST00000547018 NSUN6Q8TEA1 469 aaKnown RBP13.84□□□□□ -0.19
SCAF11-209ENST00000547018 FAM213AQ9BRX8 229 aa13.84□□□□□ -0.19
SCAF11-209ENST00000547018 TLR10Q9BXR5 811 aa13.84□□□□□ -0.19
SCAF11-209ENST00000547018 GPRC5DQ9NZD1 345 aa13.84□□□□□ -0.19
SCAF11-209ENST00000547018 CLEC11AQ9Y240 323 aa13.84□□□□□ -0.19
SCAF11-209ENST00000547018 FRMPD4Q14CM0 1322 aa13.83□□□□□ -0.19
SCAF11-209ENST00000547018 CSDE1O75534 798 aaKnown RBP13.83□□□□□ -0.2
SCAF11-209ENST00000547018 CDR1P51861 262 aa13.83□□□□□ -0.2
SCAF11-209ENST00000547018 OSTNP61366 133 aa13.83□□□□□ -0.2
SCAF11-209ENST00000547018 PSMC5P62195 406 aa13.83□□□□□ -0.2
SCAF11-209ENST00000547018 IRX3P78415 501 aaPredicted RBP13.83□□□□□ -0.2
SCAF11-209ENST00000547018 DMP1Q13316 513 aaPredicted RBP13.83□□□□□ -0.2
SCAF11-209ENST00000547018 ZNF211Q13398 564 aaPredicted RBP13.83□□□□□ -0.2
SCAF11-209ENST00000547018 TRADDQ15628 312 aa13.83□□□□□ -0.2
SCAF11-209ENST00000547018 CCDC70Q6NSX1 233 aa13.83□□□□□ -0.2
SCAF11-209ENST00000547018 SND1Q7KZF4 910 aaKnown RBP eCLIP13.83□□□□□ -0.2
SCAF11-209ENST00000547018 IRF2BP2Q7Z5L9 587 aa13.83□□□□□ -0.2
SCAF11-209ENST00000547018 BSNDQ8WZ55 320 aa13.83□□□□□ -0.2
SCAF11-209ENST00000547018 DHX38Q92620 1227 aaKnown RBP13.83□□□□□ -0.2
SCAF11-209ENST00000547018 TEX13BQ9BXU2 312 aa13.83□□□□□ -0.2
SCAF11-209ENST00000547018 FUT8Q9BYC5 575 aa13.83□□□□□ -0.2
SCAF11-209ENST00000547018 PCDHA10Q9Y5I2 948 aa13.83□□□□□ -0.2
SCAF11-209ENST00000547018 UBIAD1Q9Y5Z9 338 aa13.83□□□□□ -0.2
SCAF11-209ENST00000547018 CSADQ9Y600 493 aa13.83□□□□□ -0.2
SCAF11-209ENST00000547018 SMTNP53814 917 aa13.83□□□□□ -0.2
SCAF11-209ENST00000547018 BFSP1Q12934 665 aa13.83□□□□□ -0.2
SCAF11-209ENST00000547018 HLTFQ14527 1009 aaKnown RBP eCLIP13.83□□□□□ -0.23e-6■□□□□ 9.2
SCAF11-209ENST00000547018 ARHGEF19Q8IW93 802 aa13.83□□□□□ -0.2
SCAF11-209ENST00000547018 SPATA4Q8NEY3 305 aa13.83□□□□□ -0.2
SCAF11-209ENST00000547018 KLRG1Q96E93 195 aa13.83□□□□□ -0.2
SCAF11-209ENST00000547018 FIZ1Q96SL8 496 aa13.83□□□□□ -0.2
SCAF11-209ENST00000547018 FHDC1Q9C0D6 1143 aaPredicted RBP13.83□□□□□ -0.2
SCAF11-209ENST00000547018 NAGPAQ9UK23 515 aa13.83□□□□□ -0.2
SCAF11-209ENST00000547018 QSER1Q2KHR3 1735 aa13.83□□□□□ -0.2
SCAF11-209ENST00000547018 IRF6O14896 467 aa13.82□□□□□ -0.2
SCAF11-209ENST00000547018 H2AFZP0C0S5 128 aa13.82□□□□□ -0.2
SCAF11-209ENST00000547018 NPTX2P47972 431 aa13.82□□□□□ -0.2
SCAF11-209ENST00000547018 VAMP7P51809 220 aa13.82□□□□□ -0.2
SCAF11-209ENST00000547018 POLGP54098 1239 aaPredicted RBP13.82□□□□□ -0.2
SCAF11-209ENST00000547018 SP2Q02086 613 aa13.82□□□□□ -0.2
SCAF11-209ENST00000547018 BIRC3Q13489 604 aa13.82□□□□□ -0.2
SCAF11-209ENST00000547018 HSP90B2PQ58FF3 399 aa13.82□□□□□ -0.2
SCAF11-209ENST00000547018 PHLDB3Q6NSJ2 640 aa13.82□□□□□ -0.2
SCAF11-209ENST00000547018 H2AFVQ71UI9 128 aa13.82□□□□□ -0.2
SCAF11-209ENST00000547018 DCPSQ96C86 337 aaKnown RBP13.82□□□□□ -0.2
SCAF11-209ENST00000547018 ACCSQ96QU6 501 aa13.82□□□□□ -0.2
SCAF11-209ENST00000547018 TBC1D22BQ9NU19 505 aa13.82□□□□□ -0.2
SCAF11-209ENST00000547018 ZNF214Q9UL59 606 aaPredicted RBP13.82□□□□□ -0.2
SCAF11-209ENST00000547018 CCDC151A5D8V7 595 aa13.82□□□□□ -0.2
SCAF11-209ENST00000547018 H3BQF6 201 aa13.82□□□□□ -0.2
SCAF11-209ENST00000547018 ZRANB2O95218 330 aaKnown RBP eCLIP13.82□□□□□ -0.2
SCAF11-209ENST00000547018 NF2P35240 595 aa13.82□□□□□ -0.2
SCAF11-209ENST00000547018 LMAN1P49257 510 aa13.82□□□□□ -0.2
SCAF11-209ENST00000547018 IGBP1P78318 339 aa13.82□□□□□ -0.2
SCAF11-209ENST00000547018 CKAP4Q07065 602 aaKnown RBP13.82□□□□□ -0.2
SCAF11-209ENST00000547018 CASP8Q14790 479 aa13.82□□□□□ -0.2
SCAF11-209ENST00000547018 PEX26Q7Z412 305 aa13.82□□□□□ -0.2
SCAF11-209ENST00000547018 CREG2Q8IUH2 290 aa13.82□□□□□ -0.2
SCAF11-209ENST00000547018 GLG1Q92896 1179 aa13.82□□□□□ -0.2
SCAF11-209ENST00000547018 ZBTB45Q96K62 511 aaPredicted RBP13.82□□□□□ -0.2
SCAF11-209ENST00000547018 JPH1Q9HDC5 661 aaPredicted RBP13.82□□□□□ -0.2
SCAF11-209ENST00000547018 ADRB2P07550 413 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms