RNA–Protein interactions for RNA: ENST00000546843.2

R3HDM2-209, Transcript of R3H domain containing 2, humanhuman

TSL 5

Gene R3HDM2, Length 823 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-209ENST00000546843 ERVK-21P61565 698 aa18.62■□□□□ 0.57
R3HDM2-209ENST00000546843 CDC42EP1Q00587 391 aa18.62■□□□□ 0.57
R3HDM2-209ENST00000546843 FOXD4L5Q5VV16 416 aaPredicted RBP18.62■□□□□ 0.57
R3HDM2-209ENST00000546843 SLC24A5Q71RS6 500 aa18.62■□□□□ 0.57
R3HDM2-209ENST00000546843 CATSPER4Q7RTX7 472 aa18.62■□□□□ 0.57
R3HDM2-209ENST00000546843 CRIPAKQ8N1N5 446 aa18.62■□□□□ 0.57
R3HDM2-209ENST00000546843 MICALL1Q8N3F8 863 aa18.62■□□□□ 0.57
R3HDM2-209ENST00000546843 FOXD4L4Q8WXT5 416 aaPredicted RBP18.62■□□□□ 0.57
R3HDM2-209ENST00000546843 BHMT2Q9H2M3 363 aa18.62■□□□□ 0.57
R3HDM2-209ENST00000546843 MINDY3Q9H8M7 445 aa18.62■□□□□ 0.57
R3HDM2-209ENST00000546843 PIN4Q9Y237 131 aaKnown RBP18.62■□□□□ 0.57
R3HDM2-209ENST00000546843 CLIC4Q9Y696 253 aa18.62■□□□□ 0.57
R3HDM2-209ENST00000546843 COL4A4P53420 1690 aaPredicted RBP18.61■□□□□ 0.57
R3HDM2-209ENST00000546843 E9PMD0 336 aa18.61■□□□□ 0.57
R3HDM2-209ENST00000546843 STAG3L1P0CL83 205 aa18.61■□□□□ 0.57
R3HDM2-209ENST00000546843 FGFR1P11362 822 aa18.61■□□□□ 0.57
R3HDM2-209ENST00000546843 ZSCAN20P17040 1043 aaPredicted RBP18.61■□□□□ 0.57
R3HDM2-209ENST00000546843 GLRA2P23416 452 aa18.61■□□□□ 0.57
R3HDM2-209ENST00000546843 ARL2P36404 184 aa18.61■□□□□ 0.57
R3HDM2-209ENST00000546843 GRIN1Q05586 938 aa18.61■□□□□ 0.57
R3HDM2-209ENST00000546843 GRB10Q13322 594 aa18.61■□□□□ 0.57
R3HDM2-209ENST00000546843 CAPSQ13938 189 aa18.61■□□□□ 0.57
R3HDM2-209ENST00000546843 BTG3Q14201 252 aaPredicted RBP18.61■□□□□ 0.57
R3HDM2-209ENST00000546843 FAM102BQ5T8I3 360 aa18.61■□□□□ 0.57
R3HDM2-209ENST00000546843 PADI6Q6TGC4 694 aa18.61■□□□□ 0.57
R3HDM2-209ENST00000546843 FIBCD1Q8N539 461 aa18.61■□□□□ 0.57
R3HDM2-209ENST00000546843 PPM1EQ8WY54 764 aa18.61■□□□□ 0.57
R3HDM2-209ENST00000546843 ZNF689Q96CS4 500 aaPredicted RBP18.61■□□□□ 0.57
R3HDM2-209ENST00000546843 PLIN2Q99541 437 aa18.61■□□□□ 0.57
R3HDM2-209ENST00000546843 PCDHB7Q9Y5E2 793 aa18.61■□□□□ 0.57
R3HDM2-209ENST00000546843 CHD9Q3L8U1 2897 aa18.61■□□□□ 0.57
R3HDM2-209ENST00000546843 MUTP22033 750 aa18.6■□□□□ 0.57
R3HDM2-209ENST00000546843 PHKA2P46019 1235 aa18.6■□□□□ 0.57
R3HDM2-209ENST00000546843 CEBPZQ03701 1054 aaKnown RBP18.6■□□□□ 0.57
R3HDM2-209ENST00000546843 KCNK18Q7Z418 384 aa18.6■□□□□ 0.57
R3HDM2-209ENST00000546843 RNF169Q8NCN4 708 aa18.6■□□□□ 0.57
R3HDM2-209ENST00000546843 FBXO22Q8NEZ5 403 aa18.6■□□□□ 0.57
R3HDM2-209ENST00000546843 INO80BQ9C086 356 aaPredicted RBP18.6■□□□□ 0.57
R3HDM2-209ENST00000546843 POLD4Q9HCU8 107 aa18.6■□□□□ 0.57
R3HDM2-209ENST00000546843 HCSTQ9UBK5 93 aa18.6■□□□□ 0.57
R3HDM2-209ENST00000546843 MRPL42Q9Y6G3 142 aaKnown RBP18.6■□□□□ 0.57
R3HDM2-209ENST00000546843 ASAP2O43150 1006 aa18.59■□□□□ 0.57
R3HDM2-209ENST00000546843 LPXNO60711 386 aa18.59■□□□□ 0.57
R3HDM2-209ENST00000546843 CTNNB1P35222 781 aa18.59■□□□□ 0.57
R3HDM2-209ENST00000546843 MXD4Q14582 209 aaPredicted RBP18.59■□□□□ 0.57
R3HDM2-209ENST00000546843 CCDC85BQ15834 202 aaPredicted RBP18.59■□□□□ 0.57
R3HDM2-209ENST00000546843 EPC2Q52LR7 807 aa18.59■□□□□ 0.57
R3HDM2-209ENST00000546843 ARL6IP4Q66PJ3 421 aaKnown RBP18.59■□□□□ 0.57
R3HDM2-209ENST00000546843 TWF2Q6IBS0 349 aaKnown RBP18.59■□□□□ 0.57
R3HDM2-209ENST00000546843 SRGAP1Q7Z6B7 1085 aa18.59■□□□□ 0.57
R3HDM2-209ENST00000546843 ECHDC2Q86YB7 292 aa18.59■□□□□ 0.57
R3HDM2-209ENST00000546843 PNMA5Q96PV4 448 aa18.59■□□□□ 0.57
R3HDM2-209ENST00000546843 STK24Q9Y6E0 443 aa18.59■□□□□ 0.57
R3HDM2-209ENST00000546843 TTC3P53804 2025 aa18.58■□□□□ 0.56
R3HDM2-209ENST00000546843 LRRIQ4A6NIV6 560 aa18.58■□□□□ 0.56
R3HDM2-209ENST00000546843 TBKBP1A7MCY6 615 aa18.58■□□□□ 0.56
R3HDM2-209ENST00000546843 BMP15O95972 392 aa18.58■□□□□ 0.56
R3HDM2-209ENST00000546843 LINC00271P0C7V0 271 aa18.58■□□□□ 0.56
R3HDM2-209ENST00000546843 CYP11B2P19099 503 aa18.58■□□□□ 0.56
R3HDM2-209ENST00000546843 PTENP60484 403 aa18.58■□□□□ 0.56
R3HDM2-209ENST00000546843 TFDP1Q14186 410 aa18.58■□□□□ 0.56
R3HDM2-209ENST00000546843 LONRF3Q496Y0 759 aa18.58■□□□□ 0.56
R3HDM2-209ENST00000546843 CABP7Q86V35 215 aa18.58■□□□□ 0.56
R3HDM2-209ENST00000546843 TMEM192Q8IY95 271 aa18.58■□□□□ 0.56
R3HDM2-209ENST00000546843 CMTR2Q8IYT2 770 aaKnown RBP18.58■□□□□ 0.56
R3HDM2-209ENST00000546843 MCPH1Q8NEM0 835 aa18.58■□□□□ 0.56
R3HDM2-209ENST00000546843 BSNDQ8WZ55 320 aa18.58■□□□□ 0.56
R3HDM2-209ENST00000546843 AGPAT5Q9NUQ2 364 aa18.58■□□□□ 0.56
R3HDM2-209ENST00000546843 RNF19AQ9NV58 838 aa18.58■□□□□ 0.56
R3HDM2-209ENST00000546843 TMEM161AQ9NX61 479 aa18.58■□□□□ 0.56
R3HDM2-209ENST00000546843 INO80B-WBP1J3KQ70 363 aa18.57■□□□□ 0.56
R3HDM2-209ENST00000546843 EYA4O95677 639 aa18.57■□□□□ 0.56
R3HDM2-209ENST00000546843 ATF7P17544 494 aaPredicted RBP18.57■□□□□ 0.56
R3HDM2-209ENST00000546843 MARCKSP29966 332 aaPredicted RBP18.57■□□□□ 0.56
R3HDM2-209ENST00000546843 FAM189BP81408 668 aa18.57■□□□□ 0.56
R3HDM2-209ENST00000546843 MBTD1Q05BQ5 628 aa18.57■□□□□ 0.56
R3HDM2-209ENST00000546843 PTPAQ15257 358 aa18.57■□□□□ 0.56
R3HDM2-209ENST00000546843 CDK5RAP3Q96JB5 506 aa18.57■□□□□ 0.56
R3HDM2-209ENST00000546843 USP28Q96RU2 1077 aa18.57■□□□□ 0.56
R3HDM2-209ENST00000546843 RUSC1Q9BVN2 902 aa18.57■□□□□ 0.56
R3HDM2-209ENST00000546843 DACT1Q9NYF0 836 aa18.57■□□□□ 0.56
R3HDM2-209ENST00000546843 DNM3Q9UQ16 869 aa18.57■□□□□ 0.56
R3HDM2-209ENST00000546843 MTCH2Q9Y6C9 303 aa18.57■□□□□ 0.56
R3HDM2-209ENST00000546843 CHD7Q9P2D1 2997 aa18.57■□□□□ 0.56
R3HDM2-209ENST00000546843 A0A0U1RQF3 1178 aa18.56■□□□□ 0.56
R3HDM2-209ENST00000546843 GTPBP6O43824 516 aaPredicted RBP18.56■□□□□ 0.56
R3HDM2-209ENST00000546843 TSPAN1O60635 241 aa18.56■□□□□ 0.56
R3HDM2-209ENST00000546843 ERLIN2O94905 339 aa18.56■□□□□ 0.56
R3HDM2-209ENST00000546843 CSPG5O95196 566 aa18.56■□□□□ 0.56
R3HDM2-209ENST00000546843 SSBP05455 408 aaKnown RBP eCLIP18.56■□□□□ 0.56
R3HDM2-209ENST00000546843 PKP1Q13835 747 aa18.56■□□□□ 0.56
R3HDM2-209ENST00000546843 SPECC1Q5M775 1068 aa18.56■□□□□ 0.56
R3HDM2-209ENST00000546843 LPPQ93052 612 aa18.56■□□□□ 0.56
R3HDM2-209ENST00000546843 CPB2Q96IY4 423 aa18.56■□□□□ 0.56
R3HDM2-209ENST00000546843 KIFC3Q9BVG8 833 aa18.56■□□□□ 0.56
R3HDM2-209ENST00000546843 ELAC1Q9H777 363 aaKnown RBP18.56■□□□□ 0.56
R3HDM2-209ENST00000546843 B4GALT5O43286 388 aa18.55■□□□□ 0.56
R3HDM2-209ENST00000546843 FOXD4L6Q3SYB3 417 aaPredicted RBP18.55■□□□□ 0.56
R3HDM2-209ENST00000546843 TMEM119Q4V9L6 283 aa18.55■□□□□ 0.56
R3HDM2-209ENST00000546843 CLLU1OSQ5K130 101 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms