RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 KIFC3Q9BVG8 833 aa33.46■■■□□ 2.95
CCM2-219ENST00000544363 H0YCG3 227 aa33.45■■■□□ 2.95
CCM2-219ENST00000544363 GNA14O95837 355 aa33.45■■■□□ 2.95
CCM2-219ENST00000544363 GNRH1P01148 92 aa33.45■■■□□ 2.95
CCM2-219ENST00000544363 RPL13P26373 211 aaKnown RBP33.45■■■□□ 2.95
CCM2-219ENST00000544363 MTIF2P46199 727 aaKnown RBP33.45■■■□□ 2.95
CCM2-219ENST00000544363 VSTM4Q8IW00 320 aa33.45■■■□□ 2.95
CCM2-219ENST00000544363 GOLGA5Q8TBA6 731 aa33.45■■■□□ 2.95
CCM2-219ENST00000544363 COL1A2P08123 1366 aa33.45■■■□□ 2.94
CCM2-219ENST00000544363 DUSP11O75319 330 aaKnown RBP33.44■■■□□ 2.94
CCM2-219ENST00000544363 NR3C1P04150 777 aa33.44■■■□□ 2.94
CCM2-219ENST00000544363 NAMPTP43490 491 aa33.44■■■□□ 2.94
CCM2-219ENST00000544363 BRDTQ58F21 947 aaPredicted RBP33.44■■■□□ 2.94
CCM2-219ENST00000544363 ERO1AQ96HE7 468 aa33.44■■■□□ 2.94
CCM2-219ENST00000544363 IKZF4Q9H2S9 585 aa33.44■■■□□ 2.94
CCM2-219ENST00000544363 TBX20Q9UMR3 447 aa33.44■■■□□ 2.94
CCM2-219ENST00000544363 DENND3A2RUS2 1198 aa33.43■■■□□ 2.94
CCM2-219ENST00000544363 TEX33O43247 280 aa33.43■■■□□ 2.94
CCM2-219ENST00000544363 ABCD1P33897 745 aa33.43■■■□□ 2.94
CCM2-219ENST00000544363 TMC6Q7Z403 805 aa33.43■■■□□ 2.94
CCM2-219ENST00000544363 SUGCTQ9HAC7 445 aa33.43■■■□□ 2.94
CCM2-219ENST00000544363 ARHGAP28Q9P2N2 729 aa33.43■■■□□ 2.94
CCM2-219ENST00000544363 ADGRA3Q8IWK6 1321 aa33.43■■■□□ 2.94
CCM2-219ENST00000544363 CLIC2O15247 247 aa33.42■■■□□ 2.94
CCM2-219ENST00000544363 FKTNO75072 461 aa33.42■■■□□ 2.94
CCM2-219ENST00000544363 TPM2P07951 284 aa33.42■■■□□ 2.94
CCM2-219ENST00000544363 CACNB2Q08289 660 aaPredicted RBP33.42■■■□□ 2.94
CCM2-219ENST00000544363 TRIM32Q13049 653 aa33.42■■■□□ 2.94
CCM2-219ENST00000544363 MKRN4PQ13434 485 aaPredicted RBP33.42■■■□□ 2.94
CCM2-219ENST00000544363 DRP2Q13474 957 aa33.42■■■□□ 2.94
CCM2-219ENST00000544363 KCNN1Q92952 543 aa33.42■■■□□ 2.94
CCM2-219ENST00000544363 AGPAT3Q9NRZ7 376 aa33.42■■■□□ 2.94
CCM2-219ENST00000544363 EXOC7Q9UPT5 735 aa33.42■■■□□ 2.94
CCM2-219ENST00000544363 PRKCSHP14314 528 aaPredicted RBP33.42■■■□□ 2.94
CCM2-219ENST00000544363 SCP2P22307 547 aa33.42■■■□□ 2.94
CCM2-219ENST00000544363 MARSP56192 900 aaKnown RBP33.42■■■□□ 2.94
CCM2-219ENST00000544363 HS1BP3Q53T59 392 aa33.42■■■□□ 2.94
CCM2-219ENST00000544363 MAP4K3Q8IVH8 894 aa33.42■■■□□ 2.94
CCM2-219ENST00000544363 CGNQ9P2M7 1197 aaKnown RBP33.42■■■□□ 2.94
CCM2-219ENST00000544363 IMPACTQ9P2X3 320 aa33.42■■■□□ 2.94
CCM2-219ENST00000544363 C22orf31O95567 290 aa33.41■■■□□ 2.94
CCM2-219ENST00000544363 F2P00734 622 aa33.41■■■□□ 2.94
CCM2-219ENST00000544363 ELNP15502 786 aa33.41■■■□□ 2.94
CCM2-219ENST00000544363 SNRPFP62306 86 aaKnown RBP33.41■■■□□ 2.94
CCM2-219ENST00000544363 IGBP1P78318 339 aa33.41■■■□□ 2.94
CCM2-219ENST00000544363 IRX5P78411 483 aaPredicted RBP33.41■■■□□ 2.94
CCM2-219ENST00000544363 CCDC40Q4G0X9 1142 aa33.41■■■□□ 2.94
CCM2-219ENST00000544363 LRRC71Q8N4P6 559 aa33.41■■■□□ 2.94
CCM2-219ENST00000544363 PRPF31Q8WWY3 499 aaKnown RBP33.41■■■□□ 2.94
CCM2-219ENST00000544363 LGALS16A8MUM7 142 aa33.4■■■□□ 2.94
CCM2-219ENST00000544363 MAGEB2O15479 319 aa33.4■■■□□ 2.94
CCM2-219ENST00000544363 SEPT4O43236 478 aa33.4■■■□□ 2.94
CCM2-219ENST00000544363 EFCAB12Q6NXP0 572 aa33.4■■■□□ 2.94
CCM2-219ENST00000544363 DEPTORQ8TB45 409 aa33.4■■■□□ 2.94
CCM2-219ENST00000544363 PSPC1Q8WXF1 523 aaKnown RBP33.4■■■□□ 2.94
CCM2-219ENST00000544363 NOC4LQ9BVI4 516 aaKnown RBP33.4■■■□□ 2.94
CCM2-219ENST00000544363 LRRIQ4A6NIV6 560 aa33.39■■■□□ 2.94
CCM2-219ENST00000544363 ADCY3O60266 1144 aa33.39■■■□□ 2.94
CCM2-219ENST00000544363 CNGA1P29973 690 aa33.39■■■□□ 2.94
CCM2-219ENST00000544363 PPFIA1Q13136 1202 aa33.39■■■□□ 2.94
CCM2-219ENST00000544363 MXD4Q14582 209 aaPredicted RBP33.39■■■□□ 2.94
CCM2-219ENST00000544363 ARHGEF6Q15052 776 aa33.39■■■□□ 2.94
CCM2-219ENST00000544363 FSCN1Q16658 493 aaKnown RBP33.39■■■□□ 2.94
CCM2-219ENST00000544363 PTPN21Q16825 1174 aa33.39■■■□□ 2.94
CCM2-219ENST00000544363 CCDC186Q7Z3E2 898 aa33.39■■■□□ 2.94
CCM2-219ENST00000544363 RETREG2Q8NC44 543 aa33.39■■■□□ 2.94
CCM2-219ENST00000544363 ZNF296Q8WUU4 475 aaPredicted RBP33.39■■■□□ 2.94
CCM2-219ENST00000544363 KAT2BQ92831 832 aa33.39■■■□□ 2.94
CCM2-219ENST00000544363 DMAC2Q9NW81 257 aa33.39■■■□□ 2.94
CCM2-219ENST00000544363 KLRC1P26715 233 aa33.39■■■□□ 2.93
CCM2-219ENST00000544363 PBX1P40424 430 aa33.39■■■□□ 2.93
CCM2-219ENST00000544363 GJA9P57773 515 aa33.39■■■□□ 2.93
CCM2-219ENST00000544363 BEX3Q00994 111 aa33.39■■■□□ 2.93
CCM2-219ENST00000544363 CAPSQ13938 189 aa33.39■■■□□ 2.93
CCM2-219ENST00000544363 MYBPC2Q14324 1141 aa33.39■■■□□ 2.93
CCM2-219ENST00000544363 MAN2A1Q16706 1144 aa33.39■■■□□ 2.93
CCM2-219ENST00000544363 MIIPQ5JXC2 388 aa33.39■■■□□ 2.93
CCM2-219ENST00000544363 TMEM174Q8WUU8 243 aa33.39■■■□□ 2.93
CCM2-219ENST00000544363 SUCLA2Q9P2R7 463 aaPredicted RBP33.39■■■□□ 2.93
CCM2-219ENST00000544363 SLC16A3O15427 465 aaKnown RBP33.38■■■□□ 2.93
CCM2-219ENST00000544363 DNM2P50570 870 aa33.38■■■□□ 2.93
CCM2-219ENST00000544363 SLC9A9Q8IVB4 645 aa33.38■■■□□ 2.93
CCM2-219ENST00000544363 METTL13Q8N6R0 699 aa33.38■■■□□ 2.93
CCM2-219ENST00000544363 RAET1EQ8TD07 263 aa33.38■■■□□ 2.93
CCM2-219ENST00000544363 HMGCRP04035 888 aa33.37■■■□□ 2.93
CCM2-219ENST00000544363 MYL3P08590 195 aa33.37■■■□□ 2.93
CCM2-219ENST00000544363 PRKAR2AP13861 404 aaKnown RBP33.37■■■□□ 2.93
CCM2-219ENST00000544363 UBXN1Q04323 297 aa33.37■■■□□ 2.93
CCM2-219ENST00000544363 LAMTOR4Q0VGL1 99 aa33.37■■■□□ 2.93
CCM2-219ENST00000544363 GRIK4Q16099 956 aa33.37■■■□□ 2.93
CCM2-219ENST00000544363 SPECC1LQ69YQ0 1117 aa33.37■■■□□ 2.93
CCM2-219ENST00000544363 TAS1R3Q7RTX0 852 aa33.37■■■□□ 2.93
CCM2-219ENST00000544363 FRMD5Q7Z6J6 570 aa33.37■■■□□ 2.93
CCM2-219ENST00000544363 C12orf56Q8IXR9 622 aa33.37■■■□□ 2.93
CCM2-219ENST00000544363 PES1O00541 588 aaKnown RBP33.36■■■□□ 2.93
CCM2-219ENST00000544363 AKAP3O75969 853 aa33.36■■■□□ 2.93
CCM2-219ENST00000544363 KIAA0753Q2KHM9 967 aa33.36■■■□□ 2.93
CCM2-219ENST00000544363 VWA3BQ502W6 1294 aa33.36■■■□□ 2.93
CCM2-219ENST00000544363 CEP135Q66GS9 1140 aa33.36■■■□□ 2.93
CCM2-219ENST00000544363 PXYLP1Q8TE99 480 aa33.36■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms