RNA–Protein interactions for RNA: ENST00000542717.1

CHD4-209, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 204 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-209ENST00000542717 MAPK8IP2Q13387 824 aaPredicted RBP3.83□□□□□ -1.8
CHD4-209ENST00000542717 OS9Q13438 667 aaPredicted RBP3.83□□□□□ -1.8
CHD4-209ENST00000542717 PLK5Q496M5 336 aa3.83□□□□□ -1.8
CHD4-209ENST00000542717 ODR4Q5SWX8 454 aa3.83□□□□□ -1.8
CHD4-209ENST00000542717 CELF3Q5SZQ8 465 aaKnown RBP3.83□□□□□ -1.8
CHD4-209ENST00000542717 SLC9C2Q5TAH2 1124 aa3.83□□□□□ -1.8
CHD4-209ENST00000542717 SYDE2Q5VT97 1194 aa3.83□□□□□ -1.8
CHD4-209ENST00000542717 ARHGEF16Q5VV41 709 aa3.83□□□□□ -1.8
CHD4-209ENST00000542717 KCNV1Q6PIU1 500 aa3.83□□□□□ -1.8
CHD4-209ENST00000542717 SPATA31D4Q6ZUB0 917 aa3.83□□□□□ -1.8
CHD4-209ENST00000542717 FMNL3Q8IVF7 1028 aa3.83□□□□□ -1.8
CHD4-209ENST00000542717 LCORLQ8N3X6 602 aa3.83□□□□□ -1.8
CHD4-209ENST00000542717 ADAMTS14Q8WXS8 1223 aa3.83□□□□□ -1.8
CHD4-209ENST00000542717 CEP95Q96GE4 821 aa3.83□□□□□ -1.8
CHD4-209ENST00000542717 TAAR1Q96RJ0 339 aa3.83□□□□□ -1.8
CHD4-209ENST00000542717 RMDN3Q96TC7 470 aa3.83□□□□□ -1.8
CHD4-209ENST00000542717 DNAJC2Q99543 621 aaKnown RBP3.83□□□□□ -1.8
CHD4-209ENST00000542717 KIF2CQ99661 725 aa3.83□□□□□ -1.8
CHD4-209ENST00000542717 DBNDD2Q9BQY9 259 aa3.83□□□□□ -1.8
CHD4-209ENST00000542717 NUSAP1Q9BXS6 441 aaKnown RBP3.83□□□□□ -1.8
CHD4-209ENST00000542717 FAM117AQ9C073 453 aa3.83□□□□□ -1.8
CHD4-209ENST00000542717 TMX1Q9H3N1 280 aa3.83□□□□□ -1.8
CHD4-209ENST00000542717 MRPL17Q9NRX2 175 aaKnown RBP3.83□□□□□ -1.8
CHD4-209ENST00000542717 ATP8A2Q9NTI2 1148 aa3.83□□□□□ -1.8
CHD4-209ENST00000542717 TMEM161AQ9NX61 479 aa3.83□□□□□ -1.8
CHD4-209ENST00000542717 DKK4Q9UBT3 224 aa3.83□□□□□ -1.8
CHD4-209ENST00000542717 SEPT3Q9UH03 358 aa3.83□□□□□ -1.8
CHD4-209ENST00000542717 TUBE1Q9UJT0 475 aa3.83□□□□□ -1.8
CHD4-209ENST00000542717 CDH7Q9ULB5 785 aa3.83□□□□□ -1.8
CHD4-209ENST00000542717 POLIQ9UNA4 740 aa3.83□□□□□ -1.8
CHD4-209ENST00000542717 IRAK3Q9Y616 596 aa3.83□□□□□ -1.8
CHD4-209ENST00000542717 SQORQ9Y6N5 450 aa3.83□□□□□ -1.8
CHD4-209ENST00000542717 FANCIQ9NVI1 1328 aa3.83□□□□□ -1.8
CHD4-209ENST00000542717 CELSR3Q9NYQ7 3312 aa3.83□□□□□ -1.8
CHD4-209ENST00000542717 LAMA5O15230 3695 aa3.83□□□□□ -1.8
CHD4-209ENST00000542717 CFAP46Q8IYW2 2715 aa3.82□□□□□ -1.8
CHD4-209ENST00000542717 F5P12259 2224 aa3.82□□□□□ -1.8
CHD4-209ENST00000542717 MYH4Q9Y623 1939 aa3.82□□□□□ -1.8
CHD4-209ENST00000542717 LAMA4Q16363 1823 aa3.82□□□□□ -1.8
CHD4-209ENST00000542717 ZNF532Q9HCE3 1301 aa3.82□□□□□ -1.8
CHD4-209ENST00000542717 IGSF9BQ9UPX0 1349 aa3.82□□□□□ -1.8
CHD4-209ENST00000542717 A0A1B0GTL3 188 aa3.82□□□□□ -1.8
CHD4-209ENST00000542717 MINDY4BA8MYZ0 360 aa3.82□□□□□ -1.8
CHD4-209ENST00000542717 C9IYK1 514 aa3.82□□□□□ -1.8
CHD4-209ENST00000542717 MEFVO15553 781 aaPredicted RBP3.82□□□□□ -1.8
CHD4-209ENST00000542717 MGEA5O60502 916 aa3.82□□□□□ -1.8
CHD4-209ENST00000542717 RPS6KA5O75582 802 aa3.82□□□□□ -1.8
CHD4-209ENST00000542717 MBD4O95243 580 aa3.82□□□□□ -1.8
CHD4-209ENST00000542717 RPLP2P05387 115 aaKnown RBP3.82□□□□□ -1.8
CHD4-209ENST00000542717 FTH1P19P0C7X4 201 aa3.82□□□□□ -1.8
CHD4-209ENST00000542717 TSPY3P0CV98 308 aa3.82□□□□□ -1.8
CHD4-209ENST00000542717 TSPY8P0CW00 308 aa3.82□□□□□ -1.8
CHD4-209ENST00000542717 CHRNB1P11230 501 aa3.82□□□□□ -1.8
CHD4-209ENST00000542717 KRT10P13645 584 aa3.82□□□□□ -1.8
CHD4-209ENST00000542717 EIF2AK2P19525 551 aaKnown RBP3.82□□□□□ -1.8
CHD4-209ENST00000542717 POU3F2P20265 443 aaPredicted RBP3.82□□□□□ -1.8
CHD4-209ENST00000542717 RASA1P20936 1047 aa3.82□□□□□ -1.8
CHD4-209ENST00000542717 CCNE1P24864 410 aa3.82□□□□□ -1.8
CHD4-209ENST00000542717 HOXC13P31276 330 aa3.82□□□□□ -1.8
CHD4-209ENST00000542717 SLC16A2P36021 539 aa3.82□□□□□ -1.8
CHD4-209ENST00000542717 EIF2S3P41091 472 aaKnown RBP3.82□□□□□ -1.8
CHD4-209ENST00000542717 DHPSP49366 369 aaPredicted RBP3.82□□□□□ -1.8
CHD4-209ENST00000542717 SP4Q02446 784 aa3.82□□□□□ -1.8
CHD4-209ENST00000542717 HNRNPDQ14103 355 aaKnown RBP3.82□□□□□ -1.8
CHD4-209ENST00000542717 UBAP2LQ14157 1087 aaKnown RBP3.82□□□□□ -1.8
CHD4-209ENST00000542717 GAS6Q14393 721 aa3.82□□□□□ -1.8
CHD4-209ENST00000542717 TRIP6Q15654 476 aaKnown RBP3.82□□□□□ -1.8
CHD4-209ENST00000542717 GRIK4Q16099 956 aa3.82□□□□□ -1.8
CHD4-209ENST00000542717 USH1GQ495M9 461 aa3.82□□□□□ -1.8
CHD4-209ENST00000542717 TRIM61Q5EBN2 209 aa3.82□□□□□ -1.8
CHD4-209ENST00000542717 C6orf132Q5T0Z8 1188 aa3.82□□□□□ -1.8
CHD4-209ENST00000542717 RCSD1Q6JBY9 416 aa3.82□□□□□ -1.8
CHD4-209ENST00000542717 TMED8Q6PL24 325 aaPredicted RBP3.82□□□□□ -1.8
CHD4-209ENST00000542717 Q6ZS52 159 aa3.82□□□□□ -1.8
CHD4-209ENST00000542717 CYP2U1Q7Z449 544 aa3.82□□□□□ -1.8
CHD4-209ENST00000542717 GRASPQ7Z6J2 395 aaPredicted RBP3.82□□□□□ -1.8
CHD4-209ENST00000542717 DDX53Q86TM3 631 aaKnown RBP3.82□□□□□ -1.8
CHD4-209ENST00000542717 TRIM50Q86XT4 487 aa3.82□□□□□ -1.8
CHD4-209ENST00000542717 FAM200AQ8TCP9 573 aa3.82□□□□□ -1.8
CHD4-209ENST00000542717 CLEC4DQ8WXI8 215 aa3.82□□□□□ -1.8
CHD4-209ENST00000542717 PIGKQ92643 395 aa3.82□□□□□ -1.8
CHD4-209ENST00000542717 DNASE1L2Q92874 299 aa3.82□□□□□ -1.8
CHD4-209ENST00000542717 FGF13Q92913 245 aa3.82□□□□□ -1.8
CHD4-209ENST00000542717 MKL1Q969V6 931 aa3.82□□□□□ -1.8
CHD4-209ENST00000542717 GMCL1Q96IK5 515 aa3.82□□□□□ -1.8
CHD4-209ENST00000542717 ZC3H10Q96K80 434 aaKnown RBP3.82□□□□□ -1.8
CHD4-209ENST00000542717 CASD1Q96PB1 797 aa3.82□□□□□ -1.8
CHD4-209ENST00000542717 IWS1Q96ST2 819 aa3.82□□□□□ -1.8
CHD4-209ENST00000542717 GTPBP2Q9BX10 602 aaKnown RBP3.82□□□□□ -1.8
CHD4-209ENST00000542717 CELF4Q9BZC1 486 aaKnown RBP3.82□□□□□ -1.8
CHD4-209ENST00000542717 SEMA4CQ9C0C4 833 aa3.82□□□□□ -1.8
CHD4-209ENST00000542717 NT5C3AQ9H0P0 336 aa3.82□□□□□ -1.8
CHD4-209ENST00000542717 DUSP15Q9H1R2 295 aaPredicted RBP3.82□□□□□ -1.8
CHD4-209ENST00000542717 ANTXR1Q9H6X2 564 aa3.82□□□□□ -1.8
CHD4-209ENST00000542717 RGS18Q9NS28 235 aa3.82□□□□□ -1.8
CHD4-209ENST00000542717 RBM12Q9NTZ6 932 aaKnown RBP3.82□□□□□ -1.8
CHD4-209ENST00000542717 MTMR4Q9NYA4 1195 aa3.82□□□□□ -1.8
CHD4-209ENST00000542717 SEPT9Q9UHD8 586 aaPredicted RBP3.82□□□□□ -1.8
CHD4-209ENST00000542717 PNMA2Q9UL42 364 aa3.82□□□□□ -1.8
CHD4-209ENST00000542717 STX8Q9UNK0 236 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms