RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 ZNF252P-AS1Q0IIN9 211 aa10.5□□□□□ -0.73
USP28-205ENST00000537706 MTAPQ13126 283 aa10.5□□□□□ -0.73
USP28-205ENST00000537706 ALX1Q15699 326 aa10.5□□□□□ -0.73
USP28-205ENST00000537706 SOWAHCQ53LP3 525 aaPredicted RBP10.5□□□□□ -0.73
USP28-205ENST00000537706 PCNX4Q63HM2 1172 aa10.5□□□□□ -0.73
USP28-205ENST00000537706 FAM228AQ86W67 206 aa10.5□□□□□ -0.73
USP28-205ENST00000537706 SMARCC2Q8TAQ2 1214 aa10.5□□□□□ -0.73
USP28-205ENST00000537706 MAP4K1Q92918 833 aa10.5□□□□□ -0.73
USP28-205ENST00000537706 MAN2B1O00754 1011 aa10.5□□□□□ -0.73
USP28-205ENST00000537706 SSBP05455 408 aaKnown RBP eCLIP10.5□□□□□ -0.73
USP28-205ENST00000537706 FSHRP23945 695 aa10.5□□□□□ -0.73
USP28-205ENST00000537706 KLRC1P26715 233 aa10.5□□□□□ -0.73
USP28-205ENST00000537706 CLLU1OSQ5K130 101 aa10.5□□□□□ -0.73
USP28-205ENST00000537706 MAMSTRQ6ZN01 415 aa10.5□□□□□ -0.73
USP28-205ENST00000537706 PLPPR4Q7Z2D5 763 aa10.5□□□□□ -0.73
USP28-205ENST00000537706 FEZF2Q8TBJ5 459 aa10.5□□□□□ -0.73
USP28-205ENST00000537706 TRAPPC12Q8WVT3 735 aa10.5□□□□□ -0.73
USP28-205ENST00000537706 OSMRQ99650 979 aa10.5□□□□□ -0.73
USP28-205ENST00000537706 PLEKHA4Q9H4M7 779 aa10.5□□□□□ -0.73
USP28-205ENST00000537706 ZDHHC7Q9NXF8 308 aa10.5□□□□□ -0.73
USP28-205ENST00000537706 DACT1Q9NYF0 836 aa10.5□□□□□ -0.73
USP28-205ENST00000537706 TELO2Q9Y4R8 837 aa10.5□□□□□ -0.73
USP28-205ENST00000537706 FRMPD4Q14CM0 1322 aa10.5□□□□□ -0.73
USP28-205ENST00000537706 LOXHD1Q8IVV2 1947 aa10.49□□□□□ -0.73
USP28-205ENST00000537706 SLC26A2P50443 739 aa10.49□□□□□ -0.73
USP28-205ENST00000537706 STAT5BP51692 787 aa10.49□□□□□ -0.73
USP28-205ENST00000537706 WTAPQ15007 396 aa10.49□□□□□ -0.73
USP28-205ENST00000537706 ZNF710Q8N1W2 664 aa10.49□□□□□ -0.73
USP28-205ENST00000537706 TMEM40Q8WWA1 233 aa10.49□□□□□ -0.73
USP28-205ENST00000537706 LOXL4Q96JB6 756 aa10.49□□□□□ -0.73
USP28-205ENST00000537706 PHF20Q9BVI0 1012 aa10.49□□□□□ -0.73
USP28-205ENST00000537706 CHMP4BQ9H444 224 aaKnown RBP10.49□□□□□ -0.73
USP28-205ENST00000537706 CDH7Q9ULB5 785 aa10.49□□□□□ -0.73
USP28-205ENST00000537706 HBP1O60381 514 aa10.48□□□□□ -0.73
USP28-205ENST00000537706 ZNF806P0C7X5 589 aa10.48□□□□□ -0.73
USP28-205ENST00000537706 SKIP12755 728 aa10.48□□□□□ -0.73
USP28-205ENST00000537706 CD72P21854 359 aa10.48□□□□□ -0.73
USP28-205ENST00000537706 CXCL12P48061 93 aa10.48□□□□□ -0.73
USP28-205ENST00000537706 AK2P54819 239 aa10.48□□□□□ -0.73
USP28-205ENST00000537706 KIZQ2M2Z5 673 aa10.48□□□□□ -0.73
USP28-205ENST00000537706 DAB2IPQ5VWQ8 1189 aa10.48□□□□□ -0.73
USP28-205ENST00000537706 RNF43Q68DV7 783 aa10.48□□□□□ -0.73
USP28-205ENST00000537706 LONP2Q86WA8 852 aa10.48□□□□□ -0.73
USP28-205ENST00000537706 GATA6Q92908 595 aa10.48□□□□□ -0.73
USP28-205ENST00000537706 CHRDQ9H2X0 955 aa10.48□□□□□ -0.73
USP28-205ENST00000537706 CDHR5Q9HBB8 845 aa10.48□□□□□ -0.73
USP28-205ENST00000537706 MIA3Q5JRA6 1907 aa10.48□□□□□ -0.73
USP28-205ENST00000537706 CACNA1IQ9P0X4 2223 aa10.48□□□□□ -0.73
USP28-205ENST00000537706 A0A0U1RQF3 1178 aa10.48□□□□□ -0.73
USP28-205ENST00000537706 MAFGO15525 162 aa10.48□□□□□ -0.73
USP28-205ENST00000537706 C1RP00736 705 aa10.48□□□□□ -0.73
USP28-205ENST00000537706 GALTP07902 379 aa10.48□□□□□ -0.73
USP28-205ENST00000537706 TDGF1P13385 188 aa10.48□□□□□ -0.73
USP28-205ENST00000537706 KCNA2P16389 499 aa10.48□□□□□ -0.73
USP28-205ENST00000537706 SF3A2Q15428 464 aaKnown RBP10.48□□□□□ -0.73
USP28-205ENST00000537706 ZNF484Q5JVG2 852 aa10.48□□□□□ -0.73
USP28-205ENST00000537706 PARM1Q6UWI2 310 aa10.48□□□□□ -0.73
USP28-205ENST00000537706 GLB1LQ6UWU2 654 aa10.48□□□□□ -0.73
USP28-205ENST00000537706 PDZD3Q86UT5 571 aa10.48□□□□□ -0.73
USP28-205ENST00000537706 HOMER1Q86YM7 354 aa10.48□□□□□ -0.73
USP28-205ENST00000537706 KIAA0319LQ8IZA0 1049 aa10.48□□□□□ -0.73
USP28-205ENST00000537706 FAM160A2Q8N612 972 aaPredicted RBP10.48□□□□□ -0.73
USP28-205ENST00000537706 FAM193BQ96PV7 902 aaPredicted RBP10.48□□□□□ -0.73
USP28-205ENST00000537706 PPP1R16BQ96T49 567 aa10.48□□□□□ -0.73
USP28-205ENST00000537706 ZKSCAN3Q9BRR0 538 aa10.48□□□□□ -0.73
USP28-205ENST00000537706 NT5C3AQ9H0P0 336 aa10.48□□□□□ -0.73
USP28-205ENST00000537706 JPH1Q9HDC5 661 aaPredicted RBP10.48□□□□□ -0.73
USP28-205ENST00000537706 SLC9A2Q9UBY0 812 aa10.48□□□□□ -0.73
USP28-205ENST00000537706 COL1A2P08123 1366 aa10.48□□□□□ -0.73
USP28-205ENST00000537706 VPS13AQ96RL7 3174 aa10.48□□□□□ -0.73
USP28-205ENST00000537706 MS4A1P11836 297 aa10.47□□□□□ -0.73
USP28-205ENST00000537706 FAM160B1Q5W0V3 765 aa10.47□□□□□ -0.73
USP28-205ENST00000537706 PATJQ8NI35 1801 aa10.47□□□□□ -0.73
USP28-205ENST00000537706 URGCPQ8TCY9 931 aa10.47□□□□□ -0.73
USP28-205ENST00000537706 SDF4Q9BRK5 362 aa10.47□□□□□ -0.73
USP28-205ENST00000537706 TMEM121BQ9BXQ6 578 aaPredicted RBP10.47□□□□□ -0.73
USP28-205ENST00000537706 PRKD2Q9BZL6 878 aa10.47□□□□□ -0.73
USP28-205ENST00000537706 ARRDC1-AS1Q9H2J1 176 aa10.47□□□□□ -0.73
USP28-205ENST00000537706 PKD2L1Q9P0L9 805 aa10.47□□□□□ -0.73
USP28-205ENST00000537706 NDRG2Q9UN36 371 aaKnown RBP10.47□□□□□ -0.73
USP28-205ENST00000537706 KLRF2D3W0D1 207 aa10.46□□□□□ -0.73
USP28-205ENST00000537706 C2CD2LO14523 706 aa10.46□□□□□ -0.73
USP28-205ENST00000537706 AXIN1O15169 862 aa10.46□□□□□ -0.73
USP28-205ENST00000537706 RFPL2O75678 378 aa10.46□□□□□ -0.73
USP28-205ENST00000537706 MTMR1Q13613 665 aa10.46□□□□□ -0.73
USP28-205ENST00000537706 NOMO2Q5JPE7 1267 aa10.46□□□□□ -0.73
USP28-205ENST00000537706 FGF14Q92915 247 aa10.46□□□□□ -0.73
USP28-205ENST00000537706 MTMR8Q96EF0 704 aa10.46□□□□□ -0.73
USP28-205ENST00000537706 MAP7D2Q96T17 732 aa10.46□□□□□ -0.73
USP28-205ENST00000537706 RPP25Q9BUL9 199 aaKnown RBP10.46□□□□□ -0.73
USP28-205ENST00000537706 SCNM1Q9BWG6 230 aa10.46□□□□□ -0.73
USP28-205ENST00000537706 GBP3Q9H0R5 595 aa10.46□□□□□ -0.73
USP28-205ENST00000537706 ADAMTS10Q9H324 1103 aa10.46□□□□□ -0.73
USP28-205ENST00000537706 NRDE2Q9H7Z3 1164 aa10.46□□□□□ -0.73
USP28-205ENST00000537706 CHURC1-FNTBB4DL54 471 aa10.46□□□□□ -0.74
USP28-205ENST00000537706 HRO43593 1189 aa10.46□□□□□ -0.74
USP28-205ENST00000537706 GAS2O43903 313 aaKnown RBP10.46□□□□□ -0.74
USP28-205ENST00000537706 SMARCA5O60264 1052 aaPredicted RBP10.46□□□□□ -0.74
USP28-205ENST00000537706 SEC24BO95487 1268 aa10.46□□□□□ -0.74
USP28-205ENST00000537706 RLBP1P12271 317 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms