RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 RPS6KA5O75582 802 aa11.01□□□□□ -0.65
CPSF7-217ENST00000537162 SEC24BO95487 1268 aa11.01□□□□□ -0.65
CPSF7-217ENST00000537162 SPATA31D3P0C874 917 aa11.01□□□□□ -0.65
CPSF7-217ENST00000537162 SNHG28P0DPA3 235 aa11.01□□□□□ -0.65
CPSF7-217ENST00000537162 TOP1P11387 765 aaKnown RBP11.01□□□□□ -0.65
CPSF7-217ENST00000537162 INSRRP14616 1297 aa11.01□□□□□ -0.65
CPSF7-217ENST00000537162 POLGP54098 1239 aaPredicted RBP11.01□□□□□ -0.65
CPSF7-217ENST00000537162 MRPS9P82933 396 aaKnown RBP11.01□□□□□ -0.65
CPSF7-217ENST00000537162 GIT2Q14161 759 aa11.01□□□□□ -0.65
CPSF7-217ENST00000537162 PPP4R3BQ5MIZ7 849 aa11.01□□□□□ -0.65
CPSF7-217ENST00000537162 MAMSTRQ6ZN01 415 aa11.01□□□□□ -0.65
CPSF7-217ENST00000537162 SPATA31D4Q6ZUB0 917 aa11.01□□□□□ -0.65
CPSF7-217ENST00000537162 CEP68Q76N32 757 aa11.01□□□□□ -0.65
CPSF7-217ENST00000537162 RNF169Q8NCN4 708 aa11.01□□□□□ -0.65
CPSF7-217ENST00000537162 HELQQ8TDG4 1101 aa11.01□□□□□ -0.65
CPSF7-217ENST00000537162 PIK3R5Q8WYR1 880 aa11.01□□□□□ -0.65
CPSF7-217ENST00000537162 IGSF21Q96ID5 467 aa11.01□□□□□ -0.65
CPSF7-217ENST00000537162 PPP1R16BQ96T49 567 aa11.01□□□□□ -0.65
CPSF7-217ENST00000537162 NELL2Q99435 816 aa11.01□□□□□ -0.65
CPSF7-217ENST00000537162 KXD1Q9BQD3 176 aa11.01□□□□□ -0.65
CPSF7-217ENST00000537162 MAF1Q9H063 256 aa11.01□□□□□ -0.65
CPSF7-217ENST00000537162 MRS2Q9HD23 443 aa11.01□□□□□ -0.65
CPSF7-217ENST00000537162 C2orf42Q9NWW7 574 aa11.01□□□□□ -0.65
CPSF7-217ENST00000537162 COL4A2P08572 1712 aa11.01□□□□□ -0.65
CPSF7-217ENST00000537162 PIEZO2Q9H5I5 2752 aa11□□□□□ -0.65
CPSF7-217ENST00000537162 SHROOM3Q8TF72 1996 aa11□□□□□ -0.65
CPSF7-217ENST00000537162 GSTTP1A0A1W2PQM5 241 aa11□□□□□ -0.65
CPSF7-217ENST00000537162 PATL2C9JE40 543 aaKnown RBP11□□□□□ -0.65
CPSF7-217ENST00000537162 K7ESF4 209 aa11□□□□□ -0.65
CPSF7-217ENST00000537162 ARHGAP6O43182 974 aa11□□□□□ -0.65
CPSF7-217ENST00000537162 RANBP6O60518 1105 aaKnown RBP11□□□□□ -0.65
CPSF7-217ENST00000537162 EPN2O95208 641 aa11□□□□□ -0.65
CPSF7-217ENST00000537162 ATP5JP18859 108 aa11□□□□□ -0.65
CPSF7-217ENST00000537162 CCND2P30279 289 aa11□□□□□ -0.65
CPSF7-217ENST00000537162 ALDH7A1P49419 539 aaKnown RBP11□□□□□ -0.65
CPSF7-217ENST00000537162 NEDD9Q14511 834 aa11□□□□□ -0.65
CPSF7-217ENST00000537162 QRICH1Q2TAL8 776 aa11□□□□□ -0.65
CPSF7-217ENST00000537162 ZNF852Q6ZMS4 543 aa11□□□□□ -0.65
CPSF7-217ENST00000537162 FAM228AQ86W67 206 aa11□□□□□ -0.65
CPSF7-217ENST00000537162 ABI1Q8IZP0 508 aa11□□□□□ -0.65
CPSF7-217ENST00000537162 TMEM57Q8N5G2 664 aa11□□□□□ -0.65
CPSF7-217ENST00000537162 RHOBTB2Q9BYZ6 727 aa11□□□□□ -0.65
CPSF7-217ENST00000537162 RTEL1Q9NZ71 1219 aa11□□□□□ -0.65
CPSF7-217ENST00000537162 PCDHA2Q9Y5H9 948 aa11□□□□□ -0.65
CPSF7-217ENST00000537162 PCDHA1Q9Y5I3 950 aa11□□□□□ -0.65
CPSF7-217ENST00000537162 ZNF462Q96JM2 2506 aa11□□□□□ -0.65
CPSF7-217ENST00000537162 B4GALT3O60512 393 aa10.99□□□□□ -0.65
CPSF7-217ENST00000537162 ZC3H11AO75152 810 aaKnown RBP eCLIP10.99□□□□□ -0.65
CPSF7-217ENST00000537162 IFIT2P09913 472 aaKnown RBP10.99□□□□□ -0.65
CPSF7-217ENST00000537162 CEACAM1P13688 526 aa10.99□□□□□ -0.65
CPSF7-217ENST00000537162 CXCL12P48061 93 aa10.99□□□□□ -0.65
CPSF7-217ENST00000537162 CCR3P51677 355 aa10.99□□□□□ -0.65
CPSF7-217ENST00000537162 NTHL1P78549 312 aa10.99□□□□□ -0.65
CPSF7-217ENST00000537162 PLCB4Q15147 1175 aa10.99□□□□□ -0.65
CPSF7-217ENST00000537162 ZSCAN25Q6NSZ9 544 aa10.99□□□□□ -0.65
CPSF7-217ENST00000537162 LONP2Q86WA8 852 aa10.99□□□□□ -0.65
CPSF7-217ENST00000537162 ECHDC2Q86YB7 292 aa10.99□□□□□ -0.65
CPSF7-217ENST00000537162 ERC1Q8IUD2 1116 aa10.99□□□□□ -0.65
CPSF7-217ENST00000537162 ADGRF4Q8IZF3 695 aa10.99□□□□□ -0.65
CPSF7-217ENST00000537162 EDEM2Q9BV94 578 aa10.99□□□□□ -0.65
CPSF7-217ENST00000537162 EMILIN2Q9BXX0 1053 aa10.99□□□□□ -0.65
CPSF7-217ENST00000537162 NT5C3AQ9H0P0 336 aa10.99□□□□□ -0.65
CPSF7-217ENST00000537162 ERAP1Q9NZ08 941 aa10.99□□□□□ -0.65
CPSF7-217ENST00000537162 MRPL11Q9Y3B7 192 aaKnown RBP10.99□□□□□ -0.65
CPSF7-217ENST00000537162 MTCL1Q9Y4B5 1905 aaKnown RBP10.99□□□□□ -0.65
CPSF7-217ENST00000537162 HOXA2O43364 376 aa10.98□□□□□ -0.65
CPSF7-217ENST00000537162 PAPLNO95428 1278 aa10.98□□□□□ -0.65
CPSF7-217ENST00000537162 CNR2P34972 360 aa10.98□□□□□ -0.65
CPSF7-217ENST00000537162 RAP1GAPP47736 663 aa10.98□□□□□ -0.65
CPSF7-217ENST00000537162 GHRHRQ02643 423 aa10.98□□□□□ -0.65
CPSF7-217ENST00000537162 SRSF1Q07955 248 aaKnown RBP eCLIP10.98□□□□□ -0.65
CPSF7-217ENST00000537162 SCAPQ12770 1279 aa10.98□□□□□ -0.65
CPSF7-217ENST00000537162 PPP2R5DQ14738 602 aa10.98□□□□□ -0.65
CPSF7-217ENST00000537162 CYP26C1Q6V0L0 522 aa10.98□□□□□ -0.65
CPSF7-217ENST00000537162 ZNF605Q86T29 641 aa10.98□□□□□ -0.65
CPSF7-217ENST00000537162 KBTBD6Q86V97 674 aa10.98□□□□□ -0.65
CPSF7-217ENST00000537162 DEFB124Q8NES8 71 aa10.98□□□□□ -0.65
CPSF7-217ENST00000537162 APPBP2Q92624 585 aa10.98□□□□□ -0.65
CPSF7-217ENST00000537162 INPP4AQ96PE3 977 aaPredicted RBP10.98□□□□□ -0.65
CPSF7-217ENST00000537162 SEC62Q99442 399 aaKnown RBP10.98□□□□□ -0.65
CPSF7-217ENST00000537162 PCYT2Q99447 389 aa10.98□□□□□ -0.65
CPSF7-217ENST00000537162 MKNK1Q9BUB5 465 aa10.98□□□□□ -0.65
CPSF7-217ENST00000537162 PLA2G2FQ9BZM2 168 aa10.98□□□□□ -0.65
CPSF7-217ENST00000537162 LMAN1LQ9HAT1 526 aa10.98□□□□□ -0.65
CPSF7-217ENST00000537162 PIDD1Q9HB75 910 aa10.98□□□□□ -0.65
CPSF7-217ENST00000537162 DNAJB4Q9UDY4 337 aa10.98□□□□□ -0.65
CPSF7-217ENST00000537162 TEP1Q99973 2627 aaKnown RBP10.98□□□□□ -0.65
CPSF7-217ENST00000537162 EML5Q05BV3 1969 aa10.97□□□□□ -0.65
CPSF7-217ENST00000537162 SPAG17Q6Q759 2223 aa10.97□□□□□ -0.65
CPSF7-217ENST00000537162 TEX15Q9BXT5 2789 aa10.97□□□□□ -0.65
CPSF7-217ENST00000537162 RRN3P2A6NIE6 340 aa10.97□□□□□ -0.65
CPSF7-217ENST00000537162 PYCARD-AS1I3L0S3 204 aa10.97□□□□□ -0.65
CPSF7-217ENST00000537162 C2CD2LO14523 706 aa10.97□□□□□ -0.65
CPSF7-217ENST00000537162 FOXP2O15409 715 aa10.97□□□□□ -0.65
CPSF7-217ENST00000537162 PPP1R11O60927 126 aaPredicted RBP10.97□□□□□ -0.65
CPSF7-217ENST00000537162 ATP9AO75110 1047 aa10.97□□□□□ -0.65
CPSF7-217ENST00000537162 GALTP07902 379 aa10.97□□□□□ -0.65
CPSF7-217ENST00000537162 SLC3A2P08195 630 aaKnown RBP10.97□□□□□ -0.65
CPSF7-217ENST00000537162 FSHRP23945 695 aa10.97□□□□□ -0.65
CPSF7-217ENST00000537162 MPLP40238 635 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms