RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 MYO9BQ13459 2157 aa8.12□□□□□ -1.11
YBX3-206ENST00000536823 TLR3O15455 904 aaKnown RBP8.11□□□□□ -1.11
YBX3-206ENST00000536823 ARIH2O95376 493 aa8.11□□□□□ -1.11
YBX3-206ENST00000536823 PLEKHA8P1O95397 391 aa8.11□□□□□ -1.11
YBX3-206ENST00000536823 CALM1P0DP23 149 aa8.11□□□□□ -1.11
YBX3-206ENST00000536823 CALM2P0DP24 149 aa8.11□□□□□ -1.11
YBX3-206ENST00000536823 CALM3P0DP25 149 aa8.11□□□□□ -1.11
YBX3-206ENST00000536823 TXNP10599 105 aaKnown RBP8.11□□□□□ -1.11
YBX3-206ENST00000536823 RAG1P15918 1043 aa8.11□□□□□ -1.11
YBX3-206ENST00000536823 ITGB8P26012 769 aa8.11□□□□□ -1.11
YBX3-206ENST00000536823 SMARCA1P28370 1054 aa8.11□□□□□ -1.11
YBX3-206ENST00000536823 HOXA13P31271 388 aaPredicted RBP8.11□□□□□ -1.11
YBX3-206ENST00000536823 CPT1AP50416 773 aa8.11□□□□□ -1.11
YBX3-206ENST00000536823 KRT32Q14532 448 aa8.11□□□□□ -1.11
YBX3-206ENST00000536823 STXBP2Q15833 593 aa8.11□□□□□ -1.11
YBX3-206ENST00000536823 BRDTQ58F21 947 aaPredicted RBP8.11□□□□□ -1.11
YBX3-206ENST00000536823 ARHGEF16Q5VV41 709 aa8.11□□□□□ -1.11
YBX3-206ENST00000536823 CCDC62Q6P9F0 684 aa8.11□□□□□ -1.11
YBX3-206ENST00000536823 APOA5Q6Q788 366 aa8.11□□□□□ -1.11
YBX3-206ENST00000536823 FAM126BQ8IXS8 530 aa8.11□□□□□ -1.11
YBX3-206ENST00000536823 COPS5Q92905 334 aa8.11□□□□□ -1.11
YBX3-206ENST00000536823 BADQ92934 168 aa8.11□□□□□ -1.11
YBX3-206ENST00000536823 RRP36Q96EU6 259 aaKnown RBP8.11□□□□□ -1.11
YBX3-206ENST00000536823 NEK1Q96PY6 1258 aa8.11□□□□□ -1.11
YBX3-206ENST00000536823 PDCD2LQ9BRP1 358 aa8.11□□□□□ -1.11
YBX3-206ENST00000536823 SEZ6LQ9BYH1 1024 aa8.11□□□□□ -1.11
YBX3-206ENST00000536823 GZF1Q9H116 711 aaPredicted RBP8.11□□□□□ -1.11
YBX3-206ENST00000536823 TMEM39AQ9NV64 488 aa8.11□□□□□ -1.11
YBX3-206ENST00000536823 GRIN2DO15399 1336 aa8.1□□□□□ -1.11
YBX3-206ENST00000536823 FRMPD4Q14CM0 1322 aa8.1□□□□□ -1.11
YBX3-206ENST00000536823 GCOM1H8Y6P7 765 aaPredicted RBP8.1□□□□□ -1.11
YBX3-206ENST00000536823 J3QW42 95 aa8.1□□□□□ -1.11
YBX3-206ENST00000536823 LGR5O75473 907 aa8.1□□□□□ -1.11
YBX3-206ENST00000536823 EIF3JO75822 258 aaKnown RBP8.1□□□□□ -1.11
YBX3-206ENST00000536823 WISP1O95388 367 aa8.1□□□□□ -1.11
YBX3-206ENST00000536823 GH1P01241 217 aa8.1□□□□□ -1.11
YBX3-206ENST00000536823 GHRHP01286 108 aa8.1□□□□□ -1.11
YBX3-206ENST00000536823 CD4P01730 458 aa8.1□□□□□ -1.11
YBX3-206ENST00000536823 POLR2MP0CAP2 368 aa8.1□□□□□ -1.11
YBX3-206ENST00000536823 RXRAP19793 462 aa8.1□□□□□ -1.11
YBX3-206ENST00000536823 PURAQ00577 322 aaKnown RBP8.1□□□□□ -1.11
YBX3-206ENST00000536823 EXOSC10Q01780 885 aaKnown RBP8.1□□□□□ -1.11
YBX3-206ENST00000536823 ARHGAP1Q07960 439 aa8.1□□□□□ -1.11
YBX3-206ENST00000536823 ITGA7Q13683 1181 aa8.1□□□□□ -1.11
YBX3-206ENST00000536823 ADCK5Q3MIX3 580 aa8.1□□□□□ -1.11
YBX3-206ENST00000536823 SEPT14Q6ZU15 432 aa8.1□□□□□ -1.11
YBX3-206ENST00000536823 TMTC3Q6ZXV5 915 aa8.1□□□□□ -1.11
YBX3-206ENST00000536823 ACAD11Q709F0 780 aa8.1□□□□□ -1.11
YBX3-206ENST00000536823 MICU3Q86XE3 530 aa8.1□□□□□ -1.11
YBX3-206ENST00000536823 RAB11FIP4Q86YS3 637 aa8.1□□□□□ -1.11
YBX3-206ENST00000536823 SRBD1Q8N5C6 995 aaKnown RBP8.1□□□□□ -1.11
YBX3-206ENST00000536823 IL31RAQ8NI17 732 aa8.1□□□□□ -1.11
YBX3-206ENST00000536823 PIBF1Q8WXW3 757 aa8.1□□□□□ -1.11
YBX3-206ENST00000536823 KCNB2Q92953 911 aa8.1□□□□□ -1.11
YBX3-206ENST00000536823 FAM46AQ96IP4 442 aaKnown RBP8.1□□□□□ -1.11
YBX3-206ENST00000536823 MYRFLQ96LU7 910 aa8.1□□□□□ -1.11
YBX3-206ENST00000536823 MTG1Q9BT17 334 aaPredicted RBP8.1□□□□□ -1.11
YBX3-206ENST00000536823 KRTAP4-5Q9BYR2 181 aa8.1□□□□□ -1.11
YBX3-206ENST00000536823 SEC63Q9UGP8 760 aaKnown RBP8.1□□□□□ -1.11
YBX3-206ENST00000536823 EGFL7Q9UHF1 273 aa8.1□□□□□ -1.11
YBX3-206ENST00000536823 SLC12A7Q9Y666 1083 aa8.1□□□□□ -1.11
YBX3-206ENST00000536823 CHD9Q3L8U1 2897 aa8.1□□□□□ -1.11
YBX3-206ENST00000536823 CHD7Q9P2D1 2997 aa8.09□□□□□ -1.11
YBX3-206ENST00000536823 KPNA6O60684 536 aa8.09□□□□□ -1.11
YBX3-206ENST00000536823 REC8O95072 547 aa8.09□□□□□ -1.11
YBX3-206ENST00000536823 TIMP1P01033 207 aa8.09□□□□□ -1.11
YBX3-206ENST00000536823 MYL3P08590 195 aa8.09□□□□□ -1.11
YBX3-206ENST00000536823 HMGB1P09429 215 aaKnown RBP8.09□□□□□ -1.11
YBX3-206ENST00000536823 CCND2P30279 289 aa8.09□□□□□ -1.11
YBX3-206ENST00000536823 ARSDP51689 593 aa8.09□□□□□ -1.11
YBX3-206ENST00000536823 RCAN1P53805 252 aa8.09□□□□□ -1.11
YBX3-206ENST00000536823 PSMC6P62333 389 aa8.09□□□□□ -1.11
YBX3-206ENST00000536823 FPGSQ05932 587 aa8.09□□□□□ -1.11
YBX3-206ENST00000536823 PGM5Q15124 567 aa8.09□□□□□ -1.11
YBX3-206ENST00000536823 SHHQ15465 462 aa8.09□□□□□ -1.11
YBX3-206ENST00000536823 LY6KQ17RY6 165 aa8.09□□□□□ -1.11
YBX3-206ENST00000536823 C9orf50Q5SZB4 431 aa8.09□□□□□ -1.11
YBX3-206ENST00000536823 ERICH6BQ5W0A0 696 aa8.09□□□□□ -1.11
YBX3-206ENST00000536823 SYNE3Q6ZMZ3 975 aa8.09□□□□□ -1.11
YBX3-206ENST00000536823 SND1Q7KZF4 910 aaKnown RBP eCLIP8.09□□□□□ -1.11
YBX3-206ENST00000536823 FANCBQ8NB91 859 aa8.09□□□□□ -1.11
YBX3-206ENST00000536823 AFG1LQ8WV93 481 aa8.09□□□□□ -1.11
YBX3-206ENST00000536823 TCEANC2Q96MN5 208 aa8.09□□□□□ -1.11
YBX3-206ENST00000536823 ALDH8A1Q9H2A2 487 aaPredicted RBP8.09□□□□□ -1.11
YBX3-206ENST00000536823 C11orf16Q9NQ32 467 aa8.09□□□□□ -1.11
YBX3-206ENST00000536823 PPP4R2Q9NY27 417 aa8.09□□□□□ -1.11
YBX3-206ENST00000536823 MRVI1Q9Y6F6 885 aa8.09□□□□□ -1.11
YBX3-206ENST00000536823 MYH7BA7E2Y1 1941 aa8.08□□□□□ -1.12
YBX3-206ENST00000536823 GOLGA8AA7E2F4 631 aa8.08□□□□□ -1.12
YBX3-206ENST00000536823 GOLGA8BA8MQT2 603 aa8.08□□□□□ -1.12
YBX3-206ENST00000536823 ZBTB43O43298 467 aa8.08□□□□□ -1.12
YBX3-206ENST00000536823 B4GALT4O60513 344 aa8.08□□□□□ -1.12
YBX3-206ENST00000536823 MMP3P08254 477 aa8.08□□□□□ -1.12
YBX3-206ENST00000536823 MYCLP12524 364 aaPredicted RBP8.08□□□□□ -1.12
YBX3-206ENST00000536823 HSPA4P34932 840 aa8.08□□□□□ -1.12
YBX3-206ENST00000536823 SCNN1AP37088 669 aa8.08□□□□□ -1.12
YBX3-206ENST00000536823 EPHB4P54760 987 aa8.08□□□□□ -1.12
YBX3-206ENST00000536823 PPIGQ13427 754 aaKnown RBP eCLIP8.08□□□□□ -1.122e-10■□□□□ 9.8
YBX3-206ENST00000536823 MFSD5Q6N075 450 aa8.08□□□□□ -1.12
YBX3-206ENST00000536823 NFRKBQ6P4R8 1299 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms