RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532		A0A087WWV3	80 aa		16.85	■□□□□ 0.29
NCAPD3-213	ENST00000534532	TJP3	O95049	919 aa		16.85	■□□□□ 0.29
NCAPD3-213	ENST00000534532	TDP2	O95551	362 aa		16.85	■□□□□ 0.29
NCAPD3-213	ENST00000534532	HDLBP	Q00341	1268 aa	Known RBP	16.85	■□□□□ 0.29
NCAPD3-213	ENST00000534532	RNF180	Q86T96	592 aa		16.85	■□□□□ 0.29
NCAPD3-213	ENST00000534532	PDIK1L	Q8N165	341 aa		16.85	■□□□□ 0.29
NCAPD3-213	ENST00000534532	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	16.85	■□□□□ 0.29
NCAPD3-213	ENST00000534532	SART1	O43290	800 aa	Known RBP	16.85	■□□□□ 0.29
NCAPD3-213	ENST00000534532	SCFD2	Q8WU76	684 aa		16.85	■□□□□ 0.29
NCAPD3-213	ENST00000534532	RBM41	Q96IZ5	413 aa	Known RBP	16.85	■□□□□ 0.29
NCAPD3-213	ENST00000534532	KLHL8	Q9P2G9	620 aa	Predicted RBP	16.85	■□□□□ 0.29
NCAPD3-213	ENST00000534532	CNOT8	Q9UFF9	292 aa	Known RBP	16.85	■□□□□ 0.29
NCAPD3-213	ENST00000534532	PTPRM	P28827	1452 aa		16.85	■□□□□ 0.29
NCAPD3-213	ENST00000534532	PTPRU	Q92729	1446 aa		16.85	■□□□□ 0.29
NCAPD3-213	ENST00000534532	YWHAB	P31946	246 aa	Known RBP	16.85	■□□□□ 0.29
NCAPD3-213	ENST00000534532	LLGL1	Q15334	1064 aa		16.85	■□□□□ 0.29
NCAPD3-213	ENST00000534532	BTBD8	Q5XKL5	378 aa		16.85	■□□□□ 0.29
NCAPD3-213	ENST00000534532	CYP4F22	Q6NT55	531 aa		16.85	■□□□□ 0.29
NCAPD3-213	ENST00000534532	IFT43	Q96FT9	208 aa		16.85	■□□□□ 0.29
NCAPD3-213	ENST00000534532	TRPM1	Q7Z4N2	1603 aa		16.85	■□□□□ 0.29
NCAPD3-213	ENST00000534532	MOCS3	O95396	460 aa		16.85	■□□□□ 0.29
NCAPD3-213	ENST00000534532	CTSH	P09668	335 aa		16.85	■□□□□ 0.29
NCAPD3-213	ENST00000534532	HAUS6	Q7Z4H7	955 aa		16.85	■□□□□ 0.29
NCAPD3-213	ENST00000534532	TTC13	Q8NBP0	860 aa		16.85	■□□□□ 0.29
NCAPD3-213	ENST00000534532	OXER1	Q8TDS5	423 aa		16.85	■□□□□ 0.29
NCAPD3-213	ENST00000534532	GLT1D1	Q96MS3	346 aa		16.85	■□□□□ 0.29
NCAPD3-213	ENST00000534532	TADA2A	O75478	443 aa		16.84	■□□□□ 0.29
NCAPD3-213	ENST00000534532	INPP5B	P32019	993 aa		16.84	■□□□□ 0.29
NCAPD3-213	ENST00000534532	IRX4	P78413	519 aa		16.84	■□□□□ 0.29
NCAPD3-213	ENST00000534532	ABCF3	Q9NUQ8	709 aa		16.84	■□□□□ 0.29
NCAPD3-213	ENST00000534532	ADAMTS1	Q9UHI8	967 aa		16.84	■□□□□ 0.29
NCAPD3-213	ENST00000534532	MED14	O60244	1454 aa		16.84	■□□□□ 0.29
NCAPD3-213	ENST00000534532	EYA4	O95677	639 aa		16.84	■□□□□ 0.29
NCAPD3-213	ENST00000534532	FTCD	O95954	541 aa		16.84	■□□□□ 0.29
NCAPD3-213	ENST00000534532	MMP14	P50281	582 aa		16.84	■□□□□ 0.29
NCAPD3-213	ENST00000534532	PLTP	P55058	493 aa		16.84	■□□□□ 0.29
NCAPD3-213	ENST00000534532	IL9R	Q01113	521 aa		16.84	■□□□□ 0.29
NCAPD3-213	ENST00000534532	DBN1	Q16643	649 aa		16.84	■□□□□ 0.29
NCAPD3-213	ENST00000534532	KLC3	Q6P597	504 aa		16.84	■□□□□ 0.29
NCAPD3-213	ENST00000534532	ENOSF1	Q7L5Y1	443 aa		16.84	■□□□□ 0.29
NCAPD3-213	ENST00000534532	RSRC1	Q96IZ7	334 aa	Known RBP	16.84	■□□□□ 0.29
NCAPD3-213	ENST00000534532	KLC2	Q9H0B6	622 aa		16.84	■□□□□ 0.29
NCAPD3-213	ENST00000534532	ADARB2	Q9NS39	739 aa	Known RBP	16.84	■□□□□ 0.29
NCAPD3-213	ENST00000534532	PCDHA13	Q9Y5I0	950 aa		16.84	■□□□□ 0.29
NCAPD3-213	ENST00000534532	TFRC	P02786	760 aa	Known RBP	16.84	■□□□□ 0.29
NCAPD3-213	ENST00000534532	PDCD6IP	Q8WUM4	868 aa	Known RBP	16.84	■□□□□ 0.29
NCAPD3-213	ENST00000534532	RABEP2	Q9H5N1	569 aa		16.84	■□□□□ 0.29
NCAPD3-213	ENST00000534532	DYRK4	Q9NR20	520 aa		16.84	■□□□□ 0.29
NCAPD3-213	ENST00000534532	ENC1	O14682	589 aa		16.84	■□□□□ 0.29
NCAPD3-213	ENST00000534532	PCK1	P35558	622 aa		16.84	■□□□□ 0.29
NCAPD3-213	ENST00000534532	PAPOLA	P51003	745 aa	Known RBP	16.84	■□□□□ 0.29
NCAPD3-213	ENST00000534532	MAPK8IP2	Q13387	824 aa	Predicted RBP	16.84	■□□□□ 0.29
NCAPD3-213	ENST00000534532	KRT31	Q15323	416 aa		16.84	■□□□□ 0.29
NCAPD3-213	ENST00000534532	SPOPL	Q6IQ16	392 aa		16.84	■□□□□ 0.29
NCAPD3-213	ENST00000534532	STAG2	Q8N3U4	1231 aa		16.84	■□□□□ 0.29
NCAPD3-213	ENST00000534532	TMEM39B	Q9GZU3	492 aa		16.84	■□□□□ 0.29
NCAPD3-213	ENST00000534532	CDC42BPA	Q5VT25	1732 aa		16.84	■□□□□ 0.29
NCAPD3-213	ENST00000534532	CYBB	P04839	570 aa		16.83	■□□□□ 0.29
NCAPD3-213	ENST00000534532	SF3A3	Q12874	501 aa	Known RBP eCLIP	16.83	■□□□□ 0.29
NCAPD3-213	ENST00000534532	TSNAXIP1	Q2TAA8	658 aa		16.83	■□□□□ 0.29
NCAPD3-213	ENST00000534532	BBS9	Q3SYG4	887 aa		16.83	■□□□□ 0.29
NCAPD3-213	ENST00000534532	ACCSL	Q4AC99	568 aa		16.83	■□□□□ 0.29
NCAPD3-213	ENST00000534532	ADORA2B	P29275	332 aa		16.83	■□□□□ 0.29
NCAPD3-213	ENST00000534532	CDC27	P30260	824 aa		16.83	■□□□□ 0.29
NCAPD3-213	ENST00000534532	GNAS	Q5JWF2	1037 aa		16.83	■□□□□ 0.29
NCAPD3-213	ENST00000534532	ZNF512B	Q96KM6	892 aa	Predicted RBP	16.83	■□□□□ 0.29
NCAPD3-213	ENST00000534532	CALR3	Q96L12	384 aa	Known RBP	16.83	■□□□□ 0.29
NCAPD3-213	ENST00000534532	FSD1L	Q9BXM9	530 aa		16.83	■□□□□ 0.29
NCAPD3-213	ENST00000534532	CEP72	Q9P209	647 aa		16.83	■□□□□ 0.29
NCAPD3-213	ENST00000534532	ANAPC7	Q9UJX3	599 aa		16.83	■□□□□ 0.29
NCAPD3-213	ENST00000534532	HIP1R	O75146	1068 aa		16.83	■□□□□ 0.28
NCAPD3-213	ENST00000534532	MYRIP	Q8NFW9	859 aa		16.83	■□□□□ 0.28
NCAPD3-213	ENST00000534532	N4BP2L2	Q92802	583 aa	Predicted RBP	16.83	■□□□□ 0.28
NCAPD3-213	ENST00000534532	MAGEB5	Q9BZ81	275 aa		16.83	■□□□□ 0.28
NCAPD3-213	ENST00000534532	PRR12	Q9ULL5	1215 aa		16.83	■□□□□ 0.28
NCAPD3-213	ENST00000534532	PNPLA6	Q8IY17	1366 aa		16.83	■□□□□ 0.28
NCAPD3-213	ENST00000534532	RPS6KA5	O75582	802 aa		16.83	■□□□□ 0.28
NCAPD3-213	ENST00000534532	MT-ND3	P03897	115 aa		16.83	■□□□□ 0.28
NCAPD3-213	ENST00000534532	FBXO33	Q7Z6M2	555 aa		16.83	■□□□□ 0.28
NCAPD3-213	ENST00000534532	SCYL3	Q8IZE3	742 aa		16.83	■□□□□ 0.28
NCAPD3-213	ENST00000534532	GJB4	Q9NTQ9	266 aa		16.83	■□□□□ 0.28
NCAPD3-213	ENST00000534532	ASAP2	O43150	1006 aa		16.83	■□□□□ 0.28
NCAPD3-213	ENST00000534532	CPT1A	P50416	773 aa		16.83	■□□□□ 0.28
NCAPD3-213	ENST00000534532	SDCCAG3	Q96C92	435 aa		16.83	■□□□□ 0.28
NCAPD3-213	ENST00000534532	RGS2	P41220	211 aa		16.82	■□□□□ 0.28
NCAPD3-213	ENST00000534532	NAALADL2	Q58DX5	795 aa		16.82	■□□□□ 0.28
NCAPD3-213	ENST00000534532	EFHC2	Q5JST6	749 aa		16.82	■□□□□ 0.28
NCAPD3-213	ENST00000534532	C16orf86	Q6ZW13	317 aa		16.82	■□□□□ 0.28
NCAPD3-213	ENST00000534532	SPATA2L	Q8IUW3	424 aa	Predicted RBP	16.82	■□□□□ 0.28
NCAPD3-213	ENST00000534532	LMNTD2	Q8IXW0	634 aa		16.82	■□□□□ 0.28
NCAPD3-213	ENST00000534532	SAAL1	Q96ER3	474 aa		16.82	■□□□□ 0.28
NCAPD3-213	ENST00000534532	ABCA9	Q8IUA7	1624 aa		16.82	■□□□□ 0.28
NCAPD3-213	ENST00000534532	MAFG	O15525	162 aa		16.82	■□□□□ 0.28
NCAPD3-213	ENST00000534532	UPP2	O95045	317 aa		16.82	■□□□□ 0.28
NCAPD3-213	ENST00000534532	TTC23L	Q6PF05	361 aa		16.82	■□□□□ 0.28
NCAPD3-213	ENST00000534532	CHAMP1	Q96JM3	812 aa		16.82	■□□□□ 0.28
NCAPD3-213	ENST00000534532	SPON2	Q9BUD6	331 aa		16.82	■□□□□ 0.28
NCAPD3-213	ENST00000534532	EHD2	Q9NZN4	543 aa		16.82	■□□□□ 0.28
NCAPD3-213	ENST00000534532	TTI1	O43156	1089 aa		16.82	■□□□□ 0.28
NCAPD3-213	ENST00000534532	ZRANB2	O95218	330 aa	Known RBP eCLIP	16.82	■□□□□ 0.28

Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms