RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 CHD7Q9P2D1 2997 aa10.96□□□□□ -0.65
NUP98-220ENST00000533346 MYH15Q9Y2K3 1946 aa10.96□□□□□ -0.65
NUP98-220ENST00000533346 H3BNC9 293 aa10.96□□□□□ -0.65
NUP98-220ENST00000533346 SKIP12755 728 aa10.96□□□□□ -0.65
NUP98-220ENST00000533346 ZSCAN20P17040 1043 aaPredicted RBP10.96□□□□□ -0.65
NUP98-220ENST00000533346 SFPQP23246 707 aaKnown RBP eCLIP10.96□□□□□ -0.65
NUP98-220ENST00000533346 LAMTOR4Q0VGL1 99 aa10.96□□□□□ -0.65
NUP98-220ENST00000533346 NBR1Q14596 966 aa10.96□□□□□ -0.65
NUP98-220ENST00000533346 DTHD1Q6ZMT9 781 aa10.96□□□□□ -0.65
NUP98-220ENST00000533346 ZNF598Q86UK7 904 aaKnown RBP10.96□□□□□ -0.65
NUP98-220ENST00000533346 RHPN2Q8IUC4 686 aa10.96□□□□□ -0.65
NUP98-220ENST00000533346 MCPH1Q8NEM0 835 aa10.96□□□□□ -0.65
NUP98-220ENST00000533346 NLRP7Q8WX94 980 aa10.96□□□□□ -0.65
NUP98-220ENST00000533346 P2RX5Q93086 422 aa10.96□□□□□ -0.65
NUP98-220ENST00000533346 AK8Q96MA6 479 aa10.96□□□□□ -0.65
NUP98-220ENST00000533346 PLVAPQ9BX97 442 aa10.96□□□□□ -0.65
NUP98-220ENST00000533346 ATP6V0A4Q9HBG4 840 aa10.96□□□□□ -0.65
NUP98-220ENST00000533346 RAPGEFL1Q9UHV5 662 aa10.96□□□□□ -0.65
NUP98-220ENST00000533346 GINS2Q9Y248 185 aa10.96□□□□□ -0.65
NUP98-220ENST00000533346 PCDHB7Q9Y5E2 793 aa10.96□□□□□ -0.65
NUP98-220ENST00000533346 MTCH2Q9Y6C9 303 aa10.96□□□□□ -0.65
NUP98-220ENST00000533346 DENND3A2RUS2 1198 aa10.95□□□□□ -0.66
NUP98-220ENST00000533346 EPOPA6NHQ4 379 aa10.95□□□□□ -0.66
NUP98-220ENST00000533346 HOXA2O43364 376 aa10.95□□□□□ -0.66
NUP98-220ENST00000533346 UPP2O95045 317 aa10.95□□□□□ -0.66
NUP98-220ENST00000533346 CYP11B2P19099 503 aa10.95□□□□□ -0.66
NUP98-220ENST00000533346 SYT1P21579 422 aa10.95□□□□□ -0.66
NUP98-220ENST00000533346 AXLP30530 894 aa10.95□□□□□ -0.66
NUP98-220ENST00000533346 BMPR1AP36894 532 aa10.95□□□□□ -0.66
NUP98-220ENST00000533346 PTENP60484 403 aa10.95□□□□□ -0.66
NUP98-220ENST00000533346 GRB10Q13322 594 aa10.95□□□□□ -0.66
NUP98-220ENST00000533346 EPC2Q52LR7 807 aa10.95□□□□□ -0.66
NUP98-220ENST00000533346 MCTP1Q6DN14 999 aa10.95□□□□□ -0.66
NUP98-220ENST00000533346 TMEM192Q8IY95 271 aa10.95□□□□□ -0.66
NUP98-220ENST00000533346 FIBCD1Q8N539 461 aa10.95□□□□□ -0.66
NUP98-220ENST00000533346 MAFAQ8NHW3 353 aaPredicted RBP10.95□□□□□ -0.66
NUP98-220ENST00000533346 PIGOQ8TEQ8 1089 aa10.95□□□□□ -0.66
NUP98-220ENST00000533346 MMTAG2Q9BU76 263 aaKnown RBP10.95□□□□□ -0.66
NUP98-220ENST00000533346 LMAN2LQ9H0V9 348 aa10.95□□□□□ -0.66
NUP98-220ENST00000533346 ZSCAN16Q9H4T2 348 aaPredicted RBP10.95□□□□□ -0.66
NUP98-220ENST00000533346 AGPAT5Q9NUQ2 364 aa10.95□□□□□ -0.66
NUP98-220ENST00000533346 ATG2AQ2TAZ0 1938 aa10.94□□□□□ -0.66
NUP98-220ENST00000533346 TRANK1O15050 2925 aa10.94□□□□□ -0.66
NUP98-220ENST00000533346 CARNS1A5YM72 827 aa10.94□□□□□ -0.66
NUP98-220ENST00000533346 RAB27AP51159 221 aa10.94□□□□□ -0.66
NUP98-220ENST00000533346 TFDP1Q14186 410 aa10.94□□□□□ -0.66
NUP98-220ENST00000533346 ECM1Q16610 540 aa10.94□□□□□ -0.66
NUP98-220ENST00000533346 KRT79Q5XKE5 535 aa10.94□□□□□ -0.66
NUP98-220ENST00000533346 FAM117BQ6P1L5 589 aa10.94□□□□□ -0.66
NUP98-220ENST00000533346 MRPL10Q7Z7H8 261 aaKnown RBP10.94□□□□□ -0.66
NUP98-220ENST00000533346 ECHDC2Q86YB7 292 aa10.94□□□□□ -0.66
NUP98-220ENST00000533346 KSR1Q8IVT5 923 aa10.94□□□□□ -0.66
NUP98-220ENST00000533346 ARNTL2Q8WYA1 636 aa10.94□□□□□ -0.66
NUP98-220ENST00000533346 KCNN1Q92952 543 aa10.94□□□□□ -0.66
NUP98-220ENST00000533346 TMEM143Q96AN5 459 aa10.94□□□□□ -0.66
NUP98-220ENST00000533346 CCDC51Q96ER9 411 aa10.94□□□□□ -0.66
NUP98-220ENST00000533346 C17orf80Q9BSJ5 609 aa10.94□□□□□ -0.66
NUP98-220ENST00000533346 TMEM117Q9H0C3 514 aa10.94□□□□□ -0.66
NUP98-220ENST00000533346 NT5C3AQ9H0P0 336 aa10.94□□□□□ -0.66
NUP98-220ENST00000533346 PRDM6Q9NQX0 595 aa10.94□□□□□ -0.66
NUP98-220ENST00000533346 RNF19AQ9NV58 838 aa10.94□□□□□ -0.66
NUP98-220ENST00000533346 GTPBP6O43824 516 aaPredicted RBP10.93□□□□□ -0.66
NUP98-220ENST00000533346 EYA4O95677 639 aa10.93□□□□□ -0.66
NUP98-220ENST00000533346 GLRA2P23416 452 aa10.93□□□□□ -0.66
NUP98-220ENST00000533346 HOXA11P31270 313 aaPredicted RBP10.93□□□□□ -0.66
NUP98-220ENST00000533346 CCT6AP40227 531 aaKnown RBP10.93□□□□□ -0.66
NUP98-220ENST00000533346 PHKA2P46019 1235 aa10.93□□□□□ -0.66
NUP98-220ENST00000533346 RESTQ13127 1097 aa10.93□□□□□ -0.66
NUP98-220ENST00000533346 CAPSQ13938 189 aa10.93□□□□□ -0.66
NUP98-220ENST00000533346 BTG3Q14201 252 aaPredicted RBP10.93□□□□□ -0.66
NUP98-220ENST00000533346 PTPAQ15257 358 aa10.93□□□□□ -0.66
NUP98-220ENST00000533346 FAM187BQ17R55 369 aa10.93□□□□□ -0.66
NUP98-220ENST00000533346 CDCA2Q69YH5 1023 aaPredicted RBP10.93□□□□□ -0.66
NUP98-220ENST00000533346 POTEGQ6S5H5 508 aa10.93□□□□□ -0.66
NUP98-220ENST00000533346 PADI6Q6TGC4 694 aa10.93□□□□□ -0.66
NUP98-220ENST00000533346 PPP4R3CPQ6ZMV5 832 aa10.93□□□□□ -0.66
NUP98-220ENST00000533346 SPRED2Q7Z698 418 aa10.93□□□□□ -0.66
NUP98-220ENST00000533346 RNF149Q8NC42 400 aa10.93□□□□□ -0.66
NUP98-220ENST00000533346 CNNM3Q8NE01 707 aa10.93□□□□□ -0.66
NUP98-220ENST00000533346 FBXO22Q8NEZ5 403 aa10.93□□□□□ -0.66
NUP98-220ENST00000533346 SNX29Q8TEQ0 813 aa10.93□□□□□ -0.66
NUP98-220ENST00000533346 PRIMPOLQ96LW4 560 aa10.93□□□□□ -0.66
NUP98-220ENST00000533346 PPP1R16BQ96T49 567 aa10.93□□□□□ -0.66
NUP98-220ENST00000533346 TIPINQ9BVW5 301 aa10.93□□□□□ -0.66
NUP98-220ENST00000533346 MINDY3Q9H8M7 445 aa10.93□□□□□ -0.66
NUP98-220ENST00000533346 C17orf75Q9HAS0 396 aa10.93□□□□□ -0.66
NUP98-220ENST00000533346 KCND2Q9NZV8 630 aa10.93□□□□□ -0.66
NUP98-220ENST00000533346 KCNG1Q9UIX4 513 aa10.93□□□□□ -0.66
NUP98-220ENST00000533346 LRFN2Q9ULH4 789 aa10.93□□□□□ -0.66
NUP98-220ENST00000533346 KIAA1024Q9UPX6 916 aa10.93□□□□□ -0.66
NUP98-220ENST00000533346 MTMR6Q9Y217 621 aa10.93□□□□□ -0.66
NUP98-220ENST00000533346 ZMYM2Q9UBW7 1377 aa10.92□□□□□ -0.66
NUP98-220ENST00000533346 MYH11P35749 1972 aa10.92□□□□□ -0.66
NUP98-220ENST00000533346 PLXNA4Q9HCM2 1894 aa10.92□□□□□ -0.66
NUP98-220ENST00000533346 RBAK-RBAKDNI3L0D1 243 aa10.92□□□□□ -0.66
NUP98-220ENST00000533346 RFXAPO00287 272 aa10.92□□□□□ -0.66
NUP98-220ENST00000533346 INPPL1O15357 1258 aa10.92□□□□□ -0.66
NUP98-220ENST00000533346 STX6O43752 255 aa10.92□□□□□ -0.66
NUP98-220ENST00000533346 ATF7P17544 494 aaPredicted RBP10.92□□□□□ -0.66
NUP98-220ENST00000533346 LONP1P36776 959 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms