RNA–Protein interactions for RNA: ENST00000532678.1

PUM1-223, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-223	ENST00000532678	RSPH10B	P0C881	870 aa		9.09	□□□□□ -0.95
PUM1-223	ENST00000532678	TGFB3	P10600	412 aa		9.09	□□□□□ -0.95
PUM1-223	ENST00000532678	KCNA2	P16389	499 aa		9.09	□□□□□ -0.95
PUM1-223	ENST00000532678	CIITA	P33076	1130 aa		9.09	□□□□□ -0.95
PUM1-223	ENST00000532678	SET	Q01105	290 aa	Predicted RBP	9.09	□□□□□ -0.95
PUM1-223	ENST00000532678	GNL2	Q13823	731 aa	Known RBP	9.09	□□□□□ -0.95
PUM1-223	ENST00000532678	NEDD9	Q14511	834 aa		9.09	□□□□□ -0.95
PUM1-223	ENST00000532678	LETM2	Q2VYF4	491 aa		9.09	□□□□□ -0.95
PUM1-223	ENST00000532678	PRR16	Q569H4	304 aa		9.09	□□□□□ -0.95
PUM1-223	ENST00000532678	EARS2	Q5JPH6	523 aa	Known RBP	9.09	□□□□□ -0.95
PUM1-223	ENST00000532678	NIPA1	Q7RTP0	329 aa		9.09	□□□□□ -0.95
PUM1-223	ENST00000532678	NEK8	Q86SG6	692 aa		9.09	□□□□□ -0.95
PUM1-223	ENST00000532678	PLA2G4D	Q86XP0	818 aa		9.09	□□□□□ -0.95
PUM1-223	ENST00000532678	ATP6V0A1	Q93050	837 aa		9.09	□□□□□ -0.95
PUM1-223	ENST00000532678	ZBTB10	Q96DT7	871 aa		9.09	□□□□□ -0.95
PUM1-223	ENST00000532678	INTS4	Q96HW7	963 aa	Known RBP	9.09	□□□□□ -0.95
PUM1-223	ENST00000532678	CDHR1	Q96JP9	859 aa		9.09	□□□□□ -0.95
PUM1-223	ENST00000532678	GPR20	Q99678	358 aa		9.09	□□□□□ -0.95
PUM1-223	ENST00000532678	RNPEP	Q9H4A4	650 aa		9.09	□□□□□ -0.95
PUM1-223	ENST00000532678	TUT1	Q9H6E5	874 aa	Known RBP	9.09	□□□□□ -0.95
PUM1-223	ENST00000532678	KCNH7	Q9NS40	1196 aa		9.09	□□□□□ -0.95
PUM1-223	ENST00000532678	PCDHB11	Q9Y5F2	797 aa		9.09	□□□□□ -0.95
PUM1-223	ENST00000532678	KIAA1671	Q9BY89	1806 aa		9.08	□□□□□ -0.96
PUM1-223	ENST00000532678	ABHD14A-ACY1	A0A1B0GW23	586 aa		9.08	□□□□□ -0.96
PUM1-223	ENST00000532678		H3BQV1	296 aa		9.08	□□□□□ -0.96
PUM1-223	ENST00000532678	MEIS1	O00470	390 aa		9.08	□□□□□ -0.96
PUM1-223	ENST00000532678	EDIL3	O43854	480 aa		9.08	□□□□□ -0.96
PUM1-223	ENST00000532678	ATP9A	O75110	1047 aa		9.08	□□□□□ -0.96
PUM1-223	ENST00000532678	PPFIA4	O75335	1185 aa		9.08	□□□□□ -0.96
PUM1-223	ENST00000532678	ADH1A	P07327	375 aa		9.08	□□□□□ -0.96
PUM1-223	ENST00000532678	HSP90AA1	P07900	732 aa	Known RBP	9.08	□□□□□ -0.96
PUM1-223	ENST00000532678	AR	P10275	920 aa		9.08	□□□□□ -0.96
PUM1-223	ENST00000532678	POU3F3	P20264	500 aa	Predicted RBP	9.08	□□□□□ -0.96
PUM1-223	ENST00000532678	MARK3	P27448	753 aa		9.08	□□□□□ -0.96
PUM1-223	ENST00000532678	HOXC8	P31273	242 aa		9.08	□□□□□ -0.96
PUM1-223	ENST00000532678	USP11	P51784	963 aa		9.08	□□□□□ -0.96
PUM1-223	ENST00000532678	RAB15	P59190	212 aa		9.08	□□□□□ -0.96
PUM1-223	ENST00000532678	ITGB3BP	Q13352	177 aa	Predicted RBP	9.08	□□□□□ -0.96
PUM1-223	ENST00000532678	IKBKE	Q14164	716 aa		9.08	□□□□□ -0.96
PUM1-223	ENST00000532678	MOXD1	Q6UVY6	613 aa		9.08	□□□□□ -0.96
PUM1-223	ENST00000532678	METTL7B	Q6UX53	244 aa		9.08	□□□□□ -0.96
PUM1-223	ENST00000532678	RUFY4	Q6ZNE9	571 aa		9.08	□□□□□ -0.96
PUM1-223	ENST00000532678	LMBR1	Q8WVP7	490 aa		9.08	□□□□□ -0.96
PUM1-223	ENST00000532678	LENG9	Q96B70	501 aa		9.08	□□□□□ -0.96
PUM1-223	ENST00000532678	UIMC1	Q96RL1	719 aa		9.08	□□□□□ -0.96
PUM1-223	ENST00000532678	TGS1	Q96RS0	853 aa	Known RBP	9.08	□□□□□ -0.96
PUM1-223	ENST00000532678	RAD9A	Q99638	391 aa		9.08	□□□□□ -0.96
PUM1-223	ENST00000532678	SDF4	Q9BRK5	362 aa		9.08	□□□□□ -0.96
PUM1-223	ENST00000532678	FOXP1	Q9H334	677 aa	Predicted RBP	9.08	□□□□□ -0.96
PUM1-223	ENST00000532678	SUGCT	Q9HAC7	445 aa		9.08	□□□□□ -0.96
PUM1-223	ENST00000532678	AGO4	Q9HCK5	861 aa	Known RBP	9.08	□□□□□ -0.96
PUM1-223	ENST00000532678	KAT6A	Q92794	2004 aa		9.08	□□□□□ -0.96
PUM1-223	ENST00000532678	LOXHD1	Q8IVV2	1947 aa		9.07	□□□□□ -0.96
PUM1-223	ENST00000532678	COL4A6	Q14031	1691 aa		9.07	□□□□□ -0.96
PUM1-223	ENST00000532678	BDP1	A6H8Y1	2624 aa		9.07	□□□□□ -0.96
PUM1-223	ENST00000532678	RALGAPA2	Q2PPJ7	1873 aa		9.07	□□□□□ -0.96
PUM1-223	ENST00000532678	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	9.07	□□□□□ -0.96
PUM1-223	ENST00000532678	DDX39A	O00148	427 aa	Known RBP	9.07	□□□□□ -0.96
PUM1-223	ENST00000532678	MAFG	O15525	162 aa		9.07	□□□□□ -0.96
PUM1-223	ENST00000532678	SLC37A4	O43826	429 aa		9.07	□□□□□ -0.96
PUM1-223	ENST00000532678	CCNT1	O60563	726 aa	Known RBP	9.07	□□□□□ -0.96
PUM1-223	ENST00000532678	UPP2	O95045	317 aa		9.07	□□□□□ -0.96
PUM1-223	ENST00000532678	AMH	P03971	560 aa		9.07	□□□□□ -0.96
PUM1-223	ENST00000532678	GCFC2	P16383	781 aa	Known RBP	9.07	□□□□□ -0.96
PUM1-223	ENST00000532678	ERVK-21	P61565	698 aa		9.07	□□□□□ -0.96
PUM1-223	ENST00000532678		Q4G0T1	1027 aa		9.07	□□□□□ -0.96
PUM1-223	ENST00000532678	PLEKHG4	Q58EX7	1191 aa		9.07	□□□□□ -0.96
PUM1-223	ENST00000532678	LARP1B	Q659C4	914 aa	Known RBP	9.07	□□□□□ -0.96
PUM1-223	ENST00000532678	MCTP1	Q6DN14	999 aa		9.07	□□□□□ -0.96
PUM1-223	ENST00000532678	NOSTRIN	Q8IVI9	506 aa		9.07	□□□□□ -0.96
PUM1-223	ENST00000532678	LINC00528	Q8N1L1	170 aa		9.07	□□□□□ -0.96
PUM1-223	ENST00000532678	GIMAP8	Q8ND71	665 aa	Predicted RBP	9.07	□□□□□ -0.96
PUM1-223	ENST00000532678	GLMN	Q92990	594 aa		9.07	□□□□□ -0.96
PUM1-223	ENST00000532678	NAP1L4	Q99733	375 aa	Known RBP	9.07	□□□□□ -0.96
PUM1-223	ENST00000532678	SENP7	Q9BQF6	1050 aa		9.07	□□□□□ -0.96
PUM1-223	ENST00000532678	ZNF577	Q9BSK1	485 aa		9.07	□□□□□ -0.96
PUM1-223	ENST00000532678	JPH1	Q9HDC5	661 aa	Predicted RBP	9.07	□□□□□ -0.96
PUM1-223	ENST00000532678	DDX25	Q9UHL0	483 aa	Known RBP	9.07	□□□□□ -0.96
PUM1-223	ENST00000532678	DOLK	Q9UPQ8	538 aa		9.07	□□□□□ -0.96
PUM1-223	ENST00000532678	MYO7A	Q13402	2215 aa		9.07	□□□□□ -0.96
PUM1-223	ENST00000532678	NFASC	O94856	1347 aa		9.06	□□□□□ -0.96
PUM1-223	ENST00000532678	EMSY	Q7Z589	1322 aa		9.06	□□□□□ -0.96
PUM1-223	ENST00000532678	CYP3A7-CYP3A51P	A0A087WV96	503 aa		9.06	□□□□□ -0.96
PUM1-223	ENST00000532678	VPS37C	A5D8V6	355 aa	Predicted RBP	9.06	□□□□□ -0.96
PUM1-223	ENST00000532678	FAM86C2P	A6NEL3	165 aa		9.06	□□□□□ -0.96
PUM1-223	ENST00000532678	IPO5	O00410	1097 aa	Known RBP	9.06	□□□□□ -0.96
PUM1-223	ENST00000532678	MSH4	O15457	936 aa		9.06	□□□□□ -0.96
PUM1-223	ENST00000532678	PARN	O95453	639 aa	Known RBP	9.06	□□□□□ -0.96
PUM1-223	ENST00000532678	GHR	P10912	638 aa		9.06	□□□□□ -0.96
PUM1-223	ENST00000532678	ATP2B1	P20020	1258 aa		9.06	□□□□□ -0.96
PUM1-223	ENST00000532678	PDC	P20941	246 aa		9.06	□□□□□ -0.96
PUM1-223	ENST00000532678	CYP3A7	P24462	503 aa		9.06	□□□□□ -0.96
PUM1-223	ENST00000532678	U2AF2	P26368	475 aa	Known RBP eCLIP	9.06	□□□□□ -0.96	3e-8	■■■□□ 16.9
PUM1-223	ENST00000532678	IGBP1	P78318	339 aa		9.06	□□□□□ -0.96
PUM1-223	ENST00000532678	USP4	Q13107	963 aa		9.06	□□□□□ -0.96
PUM1-223	ENST00000532678	CBLB	Q13191	982 aa		9.06	□□□□□ -0.96
PUM1-223	ENST00000532678	PPP4R3A	Q6IN85	833 aa		9.06	□□□□□ -0.96
PUM1-223	ENST00000532678	KDF1	Q8NAX2	398 aa	Predicted RBP	9.06	□□□□□ -0.96
PUM1-223	ENST00000532678	PLPP7	Q8NBV4	271 aa		9.06	□□□□□ -0.96
PUM1-223	ENST00000532678	SEPT8	Q92599	483 aa		9.06	□□□□□ -0.96

Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms