RNA–Protein interactions for RNA: ENST00000530820.5

CAPRIN1-209, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,454 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-209ENST00000530820 EPB41P11171 864 aaKnown RBP9.47□□□□□ -0.89
CAPRIN1-209ENST00000530820 ZNF18P17022 549 aa9.47□□□□□ -0.89
CAPRIN1-209ENST00000530820 TCF7P36402 384 aaPredicted RBP9.47□□□□□ -0.89
CAPRIN1-209ENST00000530820 MAGEA4P43358 317 aa9.47□□□□□ -0.89
CAPRIN1-209ENST00000530820 PLCB3Q01970 1234 aa9.47□□□□□ -0.89
CAPRIN1-209ENST00000530820 DNAJC3Q13217 504 aa9.47□□□□□ -0.89
CAPRIN1-209ENST00000530820 SF3B3Q15393 1217 aaKnown RBP9.47□□□□□ -0.89
CAPRIN1-209ENST00000530820 LONRF1Q17RB8 773 aa9.47□□□□□ -0.89
CAPRIN1-209ENST00000530820 MYLK3Q32MK0 819 aa9.47□□□□□ -0.89
CAPRIN1-209ENST00000530820 WDR72Q3MJ13 1102 aa9.47□□□□□ -0.89
CAPRIN1-209ENST00000530820 PLA2G4EQ3MJ16 856 aa9.47□□□□□ -0.89
CAPRIN1-209ENST00000530820 CSGALNACT2Q8N6G5 542 aa9.47□□□□□ -0.89
CAPRIN1-209ENST00000530820 CSRNP1Q96S65 589 aa9.47□□□□□ -0.89
CAPRIN1-209ENST00000530820 MRPL1Q9BYD6 325 aaKnown RBP9.47□□□□□ -0.89
CAPRIN1-209ENST00000530820 NAPBQ9H115 298 aa9.47□□□□□ -0.89
CAPRIN1-209ENST00000530820 CEP126Q9P2H0 1117 aa9.47□□□□□ -0.89
CAPRIN1-209ENST00000530820 PDP2Q9P2J9 529 aa9.47□□□□□ -0.89
CAPRIN1-209ENST00000530820 SPEF1Q9Y4P9 236 aa9.47□□□□□ -0.89
CAPRIN1-209ENST00000530820 PASKQ96RG2 1323 aa9.47□□□□□ -0.89
CAPRIN1-209ENST00000530820 COL17A1Q9UMD9 1497 aaPredicted RBP9.47□□□□□ -0.89
CAPRIN1-209ENST00000530820 TAF4O00268 1085 aa9.47□□□□□ -0.89
CAPRIN1-209ENST00000530820 TTI1O43156 1089 aa9.47□□□□□ -0.89
CAPRIN1-209ENST00000530820 SNX3O60493 162 aa9.47□□□□□ -0.89
CAPRIN1-209ENST00000530820 AFPP02771 609 aaKnown RBP9.47□□□□□ -0.89
CAPRIN1-209ENST00000530820 GSTA2P09210 222 aa9.47□□□□□ -0.89
CAPRIN1-209ENST00000530820 STX2P32856 288 aa9.47□□□□□ -0.89
CAPRIN1-209ENST00000530820 CIITAP33076 1130 aa9.47□□□□□ -0.89
CAPRIN1-209ENST00000530820 XKR5Q6UX68 686 aa9.47□□□□□ -0.89
CAPRIN1-209ENST00000530820 NUDCD3Q8IVD9 361 aa9.47□□□□□ -0.89
CAPRIN1-209ENST00000530820 ZNF280CQ8ND82 737 aa9.47□□□□□ -0.89
CAPRIN1-209ENST00000530820 HELBQ8NG08 1087 aaPredicted RBP9.47□□□□□ -0.89
CAPRIN1-209ENST00000530820 KCNG4Q8TDN1 519 aa9.47□□□□□ -0.89
CAPRIN1-209ENST00000530820 MMRN2Q9H8L6 949 aa9.47□□□□□ -0.89
CAPRIN1-209ENST00000530820 NHEJ1Q9H9Q4 299 aaPredicted RBP9.47□□□□□ -0.89
CAPRIN1-209ENST00000530820 C6orf203Q9P0P8 240 aaPredicted RBP9.47□□□□□ -0.89
CAPRIN1-209ENST00000530820 TEKT2Q9UIF3 430 aa9.47□□□□□ -0.89
CAPRIN1-209ENST00000530820 PIAS1O75925 651 aa9.47□□□□□ -0.89
CAPRIN1-209ENST00000530820 ZBED1O96006 694 aa9.47□□□□□ -0.89
CAPRIN1-209ENST00000530820 ACADSP16219 412 aa9.47□□□□□ -0.89
CAPRIN1-209ENST00000530820 YWHAGP61981 247 aaKnown RBP eCLIP9.47□□□□□ -0.89
CAPRIN1-209ENST00000530820 GPSM2P81274 684 aa9.47□□□□□ -0.89
CAPRIN1-209ENST00000530820 E2F2Q14209 437 aa9.47□□□□□ -0.89
CAPRIN1-209ENST00000530820 PSMD6Q15008 389 aa9.47□□□□□ -0.89
CAPRIN1-209ENST00000530820 TXNRD1Q16881 649 aa9.47□□□□□ -0.89
CAPRIN1-209ENST00000530820 CYP4V2Q6ZWL3 525 aaPredicted RBP9.47□□□□□ -0.89
CAPRIN1-209ENST00000530820 ANKK1Q8NFD2 765 aa9.47□□□□□ -0.89
CAPRIN1-209ENST00000530820 PRPF18Q99633 342 aaKnown RBP9.47□□□□□ -0.89
CAPRIN1-209ENST00000530820 IER2Q9BTL4 223 aa9.47□□□□□ -0.89
CAPRIN1-209ENST00000530820 KANSL2Q9H9L4 492 aa9.47□□□□□ -0.89
CAPRIN1-209ENST00000530820 TUFT1Q9NNX1 390 aa9.47□□□□□ -0.89
CAPRIN1-209ENST00000530820 CCDC177Q9NQR7 707 aaPredicted RBP9.47□□□□□ -0.89
CAPRIN1-209ENST00000530820 TUBA8Q9NY65 449 aaPredicted RBP9.47□□□□□ -0.89
CAPRIN1-209ENST00000530820 POLA1P09884 1462 aaPredicted RBP9.46□□□□□ -0.89
CAPRIN1-209ENST00000530820 URB2Q14146 1524 aaKnown RBP9.46□□□□□ -0.89
CAPRIN1-209ENST00000530820 TOPBP1Q92547 1522 aa9.46□□□□□ -0.89
CAPRIN1-209ENST00000530820 MCF2LO15068 1137 aa9.46□□□□□ -0.89
CAPRIN1-209ENST00000530820 ITGA4P13612 1032 aa9.46□□□□□ -0.89
CAPRIN1-209ENST00000530820 AMPD1P23109 780 aa9.46□□□□□ -0.89
CAPRIN1-209ENST00000530820 NR4A2P43354 598 aa9.46□□□□□ -0.89
CAPRIN1-209ENST00000530820 SLC5A3P53794 718 aa9.46□□□□□ -0.89
CAPRIN1-209ENST00000530820 IST1P53990 364 aa9.46□□□□□ -0.89
CAPRIN1-209ENST00000530820 TUBB4BP68371 445 aa9.46□□□□□ -0.89
CAPRIN1-209ENST00000530820 CENPCQ03188 943 aa9.46□□□□□ -0.89
CAPRIN1-209ENST00000530820 EN1Q05925 392 aaPredicted RBP9.46□□□□□ -0.89
CAPRIN1-209ENST00000530820 NECTIN1Q15223 517 aa9.46□□□□□ -0.89
CAPRIN1-209ENST00000530820 PPP1R3AQ16821 1122 aa9.46□□□□□ -0.89
CAPRIN1-209ENST00000530820 ERMARDQ5T6L9 678 aa9.46□□□□□ -0.89
CAPRIN1-209ENST00000530820 TNS4Q8IZW8 715 aa9.46□□□□□ -0.89
CAPRIN1-209ENST00000530820 TNIP2Q8NFZ5 429 aa9.46□□□□□ -0.89
CAPRIN1-209ENST00000530820 ASCC2Q9H1I8 757 aaPredicted RBP9.46□□□□□ -0.89
CAPRIN1-209ENST00000530820 HBS1LQ9Y450 684 aaKnown RBP9.46□□□□□ -0.89
CAPRIN1-209ENST00000530820 AFF2P51816 1311 aa9.46□□□□□ -0.89
CAPRIN1-209ENST00000530820 ANKRD34BA5PLL1 514 aa9.46□□□□□ -0.9
CAPRIN1-209ENST00000530820 K7EPI3 171 aa9.46□□□□□ -0.9
CAPRIN1-209ENST00000530820 CYP2C9P11712 490 aa9.46□□□□□ -0.9
CAPRIN1-209ENST00000530820 TUBB2AQ13885 445 aa9.46□□□□□ -0.9
CAPRIN1-209ENST00000530820 PLS1Q14651 629 aa9.46□□□□□ -0.9
CAPRIN1-209ENST00000530820 MAPK11Q15759 364 aa9.46□□□□□ -0.9
CAPRIN1-209ENST00000530820 CCDC152Q4G0S7 254 aa9.46□□□□□ -0.9
CAPRIN1-209ENST00000530820 ACSBG2Q5FVE4 666 aa9.46□□□□□ -0.9
CAPRIN1-209ENST00000530820 C6orf132Q5T0Z8 1188 aa9.46□□□□□ -0.9
CAPRIN1-209ENST00000530820 KLHDC10Q6PID8 442 aa9.46□□□□□ -0.9
CAPRIN1-209ENST00000530820 CNBD2Q96M20 576 aa9.46□□□□□ -0.9
CAPRIN1-209ENST00000530820 GCNAQ96QF7 691 aa9.46□□□□□ -0.9
CAPRIN1-209ENST00000530820 TUBB2BQ9BVA1 445 aa9.46□□□□□ -0.9
CAPRIN1-209ENST00000530820 SALL4Q9UJQ4 1053 aa9.46□□□□□ -0.9
CAPRIN1-209ENST00000530820 PCDHGB4Q9UN71 923 aa9.46□□□□□ -0.9
CAPRIN1-209ENST00000530820 SNX24Q9Y343 169 aa9.46□□□□□ -0.9
CAPRIN1-209ENST00000530820 RTCBQ9Y3I0 505 aaKnown RBP9.46□□□□□ -0.9
CAPRIN1-209ENST00000530820 PCDHGB5Q9Y5G0 923 aa9.46□□□□□ -0.9
CAPRIN1-209ENST00000530820 CD109Q6YHK3 1445 aa9.46□□□□□ -0.9
CAPRIN1-209ENST00000530820 GNPATO15228 680 aa9.46□□□□□ -0.9
CAPRIN1-209ENST00000530820 PRPF3O43395 683 aaKnown RBP9.46□□□□□ -0.9
CAPRIN1-209ENST00000530820 ZNF862O60290 1169 aa9.46□□□□□ -0.9
CAPRIN1-209ENST00000530820 KLHL41O60662 606 aa9.46□□□□□ -0.9
CAPRIN1-209ENST00000530820 SCO1O75880 301 aa9.46□□□□□ -0.9
CAPRIN1-209ENST00000530820 ITGADQ13349 1161 aa9.46□□□□□ -0.9
CAPRIN1-209ENST00000530820 NCOA4Q13772 614 aa9.46□□□□□ -0.9
CAPRIN1-209ENST00000530820 CYP2A13Q16696 494 aa9.46□□□□□ -0.9
CAPRIN1-209ENST00000530820 CFAP221Q4G0U5 840 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms