RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 EVLQ9UI08 416 aaPredicted RBP6.4□□□□□ -1.38
CTR9-204ENST00000529355 SASH1O94885 1247 aa6.39□□□□□ -1.39
CTR9-204ENST00000529355 SRSF2Q01130 221 aaKnown RBP6.39□□□□□ -1.39
CTR9-204ENST00000529355 USP10Q14694 798 aaKnown RBP6.39□□□□□ -1.39
CTR9-204ENST00000529355 FSCN1Q16658 493 aaKnown RBP6.39□□□□□ -1.39
CTR9-204ENST00000529355 UGT8Q16880 541 aa6.39□□□□□ -1.39
CTR9-204ENST00000529355 TOR2AQ5JU69 321 aa6.39□□□□□ -1.39
CTR9-204ENST00000529355 RPGRQ92834 1020 aaKnown RBP6.39□□□□□ -1.39
CTR9-204ENST00000529355 SMAD5Q99717 465 aaKnown RBP6.39□□□□□ -1.39
CTR9-204ENST00000529355 ASPSCR1Q9BZE9 553 aa6.39□□□□□ -1.39
CTR9-204ENST00000529355 HOMER2Q9NSB8 354 aa6.39□□□□□ -1.39
CTR9-204ENST00000529355 SAE1Q9UBE0 346 aaPredicted RBP6.39□□□□□ -1.39
CTR9-204ENST00000529355 PRSS50Q9UI38 385 aa6.39□□□□□ -1.39
CTR9-204ENST00000529355 FAM184BQ9ULE4 1060 aa6.39□□□□□ -1.39
CTR9-204ENST00000529355 MATN2O00339 956 aa6.38□□□□□ -1.39
CTR9-204ENST00000529355 CUTAO60888 179 aa6.38□□□□□ -1.39
CTR9-204ENST00000529355 MAFO75444 373 aaPredicted RBP6.38□□□□□ -1.39
CTR9-204ENST00000529355 CNOT4O95628 575 aaKnown RBP6.38□□□□□ -1.39
CTR9-204ENST00000529355 IBSPP21815 317 aaPredicted RBP6.38□□□□□ -1.39
CTR9-204ENST00000529355 ENPP1P22413 925 aa6.38□□□□□ -1.39
CTR9-204ENST00000529355 IGBP1P78318 339 aa6.38□□□□□ -1.39
CTR9-204ENST00000529355 CDK17Q00537 523 aa6.38□□□□□ -1.39
CTR9-204ENST00000529355 CD69Q07108 199 aa6.38□□□□□ -1.39
CTR9-204ENST00000529355 PPARAQ07869 468 aa6.38□□□□□ -1.39
CTR9-204ENST00000529355 KIAA2012Q0VF49 1180 aa6.38□□□□□ -1.39
CTR9-204ENST00000529355 PCBP2Q15366 365 aaKnown RBP eCLIP6.38□□□□□ -1.39
CTR9-204ENST00000529355 ZNF827Q17R98 1081 aa6.38□□□□□ -1.39
CTR9-204ENST00000529355 BMP8AQ7Z5Y6 402 aa6.38□□□□□ -1.39
CTR9-204ENST00000529355 NECAB2Q7Z6G3 386 aa6.38□□□□□ -1.39
CTR9-204ENST00000529355 RALYLQ86SE5 291 aaKnown RBP6.38□□□□□ -1.39
CTR9-204ENST00000529355 RTKN2Q8IZC4 609 aa6.38□□□□□ -1.39
CTR9-204ENST00000529355 OR14K1Q8NGZ2 314 aa6.38□□□□□ -1.39
CTR9-204ENST00000529355 GAB3Q8WWW8 586 aa6.38□□□□□ -1.39
CTR9-204ENST00000529355 PUS7LQ9H0K6 701 aaKnown RBP6.38□□□□□ -1.39
CTR9-204ENST00000529355 CCM2LQ9NUG4 571 aaPredicted RBP6.38□□□□□ -1.39
CTR9-204ENST00000529355 DPP7Q9UHL4 492 aa6.38□□□□□ -1.39
CTR9-204ENST00000529355 FBXO10Q9UK96 956 aa6.38□□□□□ -1.39
CTR9-204ENST00000529355 NUMBLQ9Y6R0 609 aa6.38□□□□□ -1.39
CTR9-204ENST00000529355 TNKSO95271 1327 aa6.38□□□□□ -1.39
CTR9-204ENST00000529355 K7ESF4 209 aa6.37□□□□□ -1.39
CTR9-204ENST00000529355 FZD9O00144 591 aa6.37□□□□□ -1.39
CTR9-204ENST00000529355 PCDHGA12O60330 932 aa6.37□□□□□ -1.39
CTR9-204ENST00000529355 OSMP13725 252 aa6.37□□□□□ -1.39
CTR9-204ENST00000529355 ANAPC15P60006 121 aa6.37□□□□□ -1.39
CTR9-204ENST00000529355 ATP2C1P98194 919 aaPredicted RBP6.37□□□□□ -1.39
CTR9-204ENST00000529355 KLF1Q13351 362 aaPredicted RBP6.37□□□□□ -1.39
CTR9-204ENST00000529355 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.37□□□□□ -1.39
CTR9-204ENST00000529355 SYDE2Q5VT97 1194 aa6.37□□□□□ -1.39
CTR9-204ENST00000529355 AGBL4Q5VU57 503 aa6.37□□□□□ -1.39
CTR9-204ENST00000529355 KCNK18Q7Z418 384 aa6.37□□□□□ -1.39
CTR9-204ENST00000529355 REXO1L1PQ8IX06 675 aa6.37□□□□□ -1.39
CTR9-204ENST00000529355 IFNL2Q8IZJ0 200 aa6.37□□□□□ -1.39
CTR9-204ENST00000529355 PIK3C3Q8NEB9 887 aa6.37□□□□□ -1.39
CTR9-204ENST00000529355 TSPEARQ8WU66 669 aa6.37□□□□□ -1.39
CTR9-204ENST00000529355 CFHR4Q92496 578 aa6.37□□□□□ -1.39
CTR9-204ENST00000529355 ORAI2Q96SN7 254 aa6.37□□□□□ -1.39
CTR9-204ENST00000529355 POLR3BQ9NW08 1133 aaPredicted RBP6.37□□□□□ -1.39
CTR9-204ENST00000529355 DDX56Q9NY93 547 aaKnown RBP6.37□□□□□ -1.39
CTR9-204ENST00000529355 PCDHB6Q9Y5E3 794 aa6.37□□□□□ -1.39
CTR9-204ENST00000529355 PCDHGA9Q9Y5G4 932 aaKnown RBP6.37□□□□□ -1.39
CTR9-204ENST00000529355 PCDHGA8Q9Y5G5 932 aa6.37□□□□□ -1.39
CTR9-204ENST00000529355 PCDHGA7Q9Y5G6 932 aa6.37□□□□□ -1.39
CTR9-204ENST00000529355 PCDHGA6Q9Y5G7 932 aa6.37□□□□□ -1.39
CTR9-204ENST00000529355 PCDHGA3Q9Y5H0 932 aa6.37□□□□□ -1.39
CTR9-204ENST00000529355 PCDHGA2Q9Y5H1 932 aa6.37□□□□□ -1.39
CTR9-204ENST00000529355 ST20-MTHFSA0A0A6YYL1 179 aa6.36□□□□□ -1.39
CTR9-204ENST00000529355 MYBL2P10244 700 aa6.36□□□□□ -1.39
CTR9-204ENST00000529355 MAP3K12Q12852 859 aa6.36□□□□□ -1.39
CTR9-204ENST00000529355 PGM2L1Q6PCE3 622 aa6.36□□□□□ -1.39
CTR9-204ENST00000529355 TTLL10Q6ZVT0 673 aa6.36□□□□□ -1.39
CTR9-204ENST00000529355 LIMS2Q7Z4I7 341 aa6.36□□□□□ -1.39
CTR9-204ENST00000529355 WDR92Q96MX6 357 aa6.36□□□□□ -1.39
CTR9-204ENST00000529355 KCNG1Q9UIX4 513 aa6.36□□□□□ -1.39
CTR9-204ENST00000529355 CTDP1Q9Y5B0 961 aaPredicted RBP6.36□□□□□ -1.39
CTR9-204ENST00000529355 RBM8AQ9Y5S9 174 aaKnown RBP6.36□□□□□ -1.39
CTR9-204ENST00000529355 ALG1L2C9J202 215 aa6.35□□□□□ -1.39
CTR9-204ENST00000529355 HGFACQ04756 655 aa6.35□□□□□ -1.39
CTR9-204ENST00000529355 SAFB2Q14151 953 aaKnown RBP eCLIP6.35□□□□□ -1.39
CTR9-204ENST00000529355 ODF1Q14990 250 aa6.35□□□□□ -1.39
CTR9-204ENST00000529355 TBC1D10BQ4KMP7 808 aaPredicted RBP6.35□□□□□ -1.39
CTR9-204ENST00000529355 USP30Q70CQ3 517 aa6.35□□□□□ -1.39
CTR9-204ENST00000529355 LGI4Q8N135 537 aa6.35□□□□□ -1.39
CTR9-204ENST00000529355 CDYL2Q8N8U2 506 aa6.35□□□□□ -1.39
CTR9-204ENST00000529355 C1orf162Q8NEQ5 155 aaPredicted RBP6.35□□□□□ -1.39
CTR9-204ENST00000529355 ACAP3Q96P50 834 aa6.35□□□□□ -1.39
CTR9-204ENST00000529355 GNRHR2Q96P88 292 aa6.35□□□□□ -1.39
CTR9-204ENST00000529355 DPYSL5Q9BPU6 564 aa6.35□□□□□ -1.39
CTR9-204ENST00000529355 DNAJC28Q9NX36 388 aa6.35□□□□□ -1.39
CTR9-204ENST00000529355 PPP4R1LQ9P1A2 415 aa6.35□□□□□ -1.39
CTR9-204ENST00000529355 SLC4A7Q9Y6M7 1214 aa6.35□□□□□ -1.39
CTR9-204ENST00000529355 SEC24DO94855 1032 aaPredicted RBP6.34□□□□□ -1.39
CTR9-204ENST00000529355 LY86O95711 162 aa6.34□□□□□ -1.39
CTR9-204ENST00000529355 GAAP10253 952 aa6.34□□□□□ -1.39
CTR9-204ENST00000529355 NCLP19338 710 aaKnown RBP6.34□□□□□ -1.39
CTR9-204ENST00000529355 MEOX1P50221 254 aa6.34□□□□□ -1.39
CTR9-204ENST00000529355 PPP2CBP62714 309 aa6.34□□□□□ -1.39
CTR9-204ENST00000529355 PPP2CAP67775 309 aa6.34□□□□□ -1.39
CTR9-204ENST00000529355 MGAT5Q09328 741 aa6.34□□□□□ -1.39
CTR9-204ENST00000529355 KLHDC10Q6PID8 442 aa6.34□□□□□ -1.39
CTR9-204ENST00000529355 FRMD5Q7Z6J6 570 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms