RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 BMP2KQ9NSY1 1161 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC4-204ENST00000524797 ANKEF1Q9NU02 776 aa12.47□□□□□ -0.41
TRAPPC4-204ENST00000524797 COL4A3BPQ9Y5P4 624 aa12.47□□□□□ -0.41
TRAPPC4-204ENST00000524797 POTEMA6NI47 508 aa12.47□□□□□ -0.41
TRAPPC4-204ENST00000524797 HOXA2O43364 376 aa12.47□□□□□ -0.41
TRAPPC4-204ENST00000524797 GAS2O43903 313 aaKnown RBP12.47□□□□□ -0.41
TRAPPC4-204ENST00000524797 ITGB1P05556 798 aa12.47□□□□□ -0.41
TRAPPC4-204ENST00000524797 SFPQP23246 707 aaKnown RBP eCLIP12.47□□□□□ -0.41
TRAPPC4-204ENST00000524797 MAPK8IP2Q13387 824 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC4-204ENST00000524797 GNL2Q13823 731 aaKnown RBP12.47□□□□□ -0.41
TRAPPC4-204ENST00000524797 SPOUT1Q5T280 376 aaKnown RBP12.47□□□□□ -0.41
TRAPPC4-204ENST00000524797 ZNF598Q86UK7 904 aaKnown RBP12.47□□□□□ -0.41
TRAPPC4-204ENST00000524797 NOSTRINQ8IVI9 506 aa12.47□□□□□ -0.41
TRAPPC4-204ENST00000524797 KLHL23Q8NBE8 558 aa12.47□□□□□ -0.41
TRAPPC4-204ENST00000524797 SPPL3Q8TCT6 385 aa12.47□□□□□ -0.41
TRAPPC4-204ENST00000524797 UBE2Q2Q8WVN8 375 aa12.47□□□□□ -0.41
TRAPPC4-204ENST00000524797 TCP11Q8WWU5 503 aa12.47□□□□□ -0.41
TRAPPC4-204ENST00000524797 PRPF31Q8WWY3 499 aaKnown RBP12.47□□□□□ -0.41
TRAPPC4-204ENST00000524797 PSPC1Q8WXF1 523 aaKnown RBP12.47□□□□□ -0.41
TRAPPC4-204ENST00000524797 CASD1Q96PB1 797 aa12.47□□□□□ -0.41
TRAPPC4-204ENST00000524797 MTRQ99707 1265 aa12.47□□□□□ -0.41
TRAPPC4-204ENST00000524797 TMEM117Q9H0C3 514 aa12.47□□□□□ -0.41
TRAPPC4-204ENST00000524797 CWH43Q9H720 699 aa12.47□□□□□ -0.41
TRAPPC4-204ENST00000524797 ALG13Q9NP73 1137 aaKnown RBP12.47□□□□□ -0.41
TRAPPC4-204ENST00000524797 CHST12Q9NRB3 414 aa12.47□□□□□ -0.41
TRAPPC4-204ENST00000524797 HCSTQ9UBK5 93 aa12.47□□□□□ -0.41
TRAPPC4-204ENST00000524797 CD2BP2O95400 341 aaKnown RBP12.46□□□□□ -0.42
TRAPPC4-204ENST00000524797 OR52Z1P0C646 297 aa12.46□□□□□ -0.42
TRAPPC4-204ENST00000524797 ATF7P17544 494 aaPredicted RBP12.46□□□□□ -0.42
TRAPPC4-204ENST00000524797 KCNA4P22459 653 aa12.46□□□□□ -0.42
TRAPPC4-204ENST00000524797 DNAJB1P25685 340 aa12.46□□□□□ -0.42
TRAPPC4-204ENST00000524797 LAMTOR4Q0VGL1 99 aa12.46□□□□□ -0.42
TRAPPC4-204ENST00000524797 CATSPER4Q7RTX7 472 aa12.46□□□□□ -0.42
TRAPPC4-204ENST00000524797 COLGALT1Q8NBJ5 622 aa12.46□□□□□ -0.42
TRAPPC4-204ENST00000524797 TBC1D32Q96NH3 1257 aa12.46□□□□□ -0.42
TRAPPC4-204ENST00000524797 IFT122Q9HBG6 1241 aa12.46□□□□□ -0.42
TRAPPC4-204ENST00000524797 XPNPEP1Q9NQW7 623 aa12.46□□□□□ -0.42
TRAPPC4-204ENST00000524797 AAASQ9NRG9 546 aa12.46□□□□□ -0.42
TRAPPC4-204ENST00000524797 TYW1Q9NV66 732 aaKnown RBP12.46□□□□□ -0.42
TRAPPC4-204ENST00000524797 DACT1Q9NYF0 836 aa12.46□□□□□ -0.42
TRAPPC4-204ENST00000524797 NOL7Q9UMY1 257 aaKnown RBP12.46□□□□□ -0.42
TRAPPC4-204ENST00000524797 A0A0U1RQF3 1178 aa12.45□□□□□ -0.42
TRAPPC4-204ENST00000524797 ASAP2O43150 1006 aa12.45□□□□□ -0.42
TRAPPC4-204ENST00000524797 SRGAP2CP0DJJ0 459 aa12.45□□□□□ -0.42
TRAPPC4-204ENST00000524797 TRAPPC10P48553 1259 aa12.45□□□□□ -0.42
TRAPPC4-204ENST00000524797 CAMK1Q14012 370 aa12.45□□□□□ -0.42
TRAPPC4-204ENST00000524797 COL19A1Q14993 1142 aa12.45□□□□□ -0.42
TRAPPC4-204ENST00000524797 CLLU1OSQ5K130 101 aa12.45□□□□□ -0.42
TRAPPC4-204ENST00000524797 SRGAP1Q7Z6B7 1085 aa12.45□□□□□ -0.42
TRAPPC4-204ENST00000524797 FERMT3Q86UX7 667 aa12.45□□□□□ -0.42
TRAPPC4-204ENST00000524797 RNF169Q8NCN4 708 aa12.45□□□□□ -0.42
TRAPPC4-204ENST00000524797 TMX3Q96JJ7 454 aa12.45□□□□□ -0.42
TRAPPC4-204ENST00000524797 UHRF1Q96T88 793 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC4-204ENST00000524797 TUFT1Q9NNX1 390 aa12.45□□□□□ -0.42
TRAPPC4-204ENST00000524797 PCDHB12Q9Y5F1 795 aa12.45□□□□□ -0.42
TRAPPC4-204ENST00000524797 REV3LO60673 3130 aa12.45□□□□□ -0.42
TRAPPC4-204ENST00000524797 EYSQ5T1H1 3165 aa12.45□□□□□ -0.42
TRAPPC4-204ENST00000524797 MED24O75448 989 aa12.45□□□□□ -0.42
TRAPPC4-204ENST00000524797 EOMESO95936 686 aa12.45□□□□□ -0.42
TRAPPC4-204ENST00000524797 SPATA31C1P0DKV0 1188 aa12.45□□□□□ -0.42
TRAPPC4-204ENST00000524797 LAG3P18627 525 aa12.45□□□□□ -0.42
TRAPPC4-204ENST00000524797 U2AF2P26368 475 aaKnown RBP eCLIP12.45□□□□□ -0.42
TRAPPC4-204ENST00000524797 TECP42680 631 aa12.45□□□□□ -0.42
TRAPPC4-204ENST00000524797 LEXMQ3ZCV2 418 aa12.45□□□□□ -0.42
TRAPPC4-204ENST00000524797 LRRC55Q6ZSA7 311 aa12.45□□□□□ -0.42
TRAPPC4-204ENST00000524797 C4orf32Q8N8J7 132 aa12.45□□□□□ -0.42
TRAPPC4-204ENST00000524797 NECAB3Q96P71 396 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC4-204ENST00000524797 POLR3CQ9BUI4 534 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC4-204ENST00000524797 TRAIPQ9BWF2 469 aa12.45□□□□□ -0.42
TRAPPC4-204ENST00000524797 MINDY3Q9H8M7 445 aa12.45□□□□□ -0.42
TRAPPC4-204ENST00000524797 PIN4Q9Y237 131 aaKnown RBP12.45□□□□□ -0.42
TRAPPC4-204ENST00000524797 A0A087WWV3 80 aa12.44□□□□□ -0.42
TRAPPC4-204ENST00000524797 TNFRSF10AO00220 468 aa12.44□□□□□ -0.42
TRAPPC4-204ENST00000524797 CSPG5O95196 566 aa12.44□□□□□ -0.42
TRAPPC4-204ENST00000524797 XRCC6P12956 609 aaKnown RBP eCLIP12.44□□□□□ -0.42
TRAPPC4-204ENST00000524797 PHKA2P46019 1235 aa12.44□□□□□ -0.42
TRAPPC4-204ENST00000524797 RARRES1P49788 294 aa12.44□□□□□ -0.42
TRAPPC4-204ENST00000524797 TOB1P50616 345 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC4-204ENST00000524797 HYAL1Q12794 435 aa12.44□□□□□ -0.42
TRAPPC4-204ENST00000524797 NBR1Q14596 966 aa12.44□□□□□ -0.42
TRAPPC4-204ENST00000524797 TWF2Q6IBS0 349 aaKnown RBP12.44□□□□□ -0.42
TRAPPC4-204ENST00000524797 ABI1Q8IZP0 508 aa12.44□□□□□ -0.42
TRAPPC4-204ENST00000524797 LRRC43Q8N309 656 aa12.44□□□□□ -0.42
TRAPPC4-204ENST00000524797 HELQQ8TDG4 1101 aa12.44□□□□□ -0.42
TRAPPC4-204ENST00000524797 ASAP3Q8TDY4 903 aa12.44□□□□□ -0.42
TRAPPC4-204ENST00000524797 PIGOQ8TEQ8 1089 aa12.44□□□□□ -0.42
TRAPPC4-204ENST00000524797 POF1BQ8WVV4 589 aa12.44□□□□□ -0.42
TRAPPC4-204ENST00000524797 PABPC5Q96DU9 382 aaKnown RBP12.44□□□□□ -0.42
TRAPPC4-204ENST00000524797 CCDC43Q96MW1 224 aaKnown RBP12.44□□□□□ -0.42
TRAPPC4-204ENST00000524797 AGPAT5Q9NUQ2 364 aa12.44□□□□□ -0.42
TRAPPC4-204ENST00000524797 KIF3AQ9Y496 699 aa12.44□□□□□ -0.42
TRAPPC4-204ENST00000524797 PRUNE2Q8WUY3 3088 aa12.44□□□□□ -0.42
TRAPPC4-204ENST00000524797 DGAT1O75907 488 aa12.43□□□□□ -0.42
TRAPPC4-204ENST00000524797 SKIP12755 728 aa12.43□□□□□ -0.42
TRAPPC4-204ENST00000524797 KCNA5P22460 613 aa12.43□□□□□ -0.42
TRAPPC4-204ENST00000524797 IRS1P35568 1242 aa12.43□□□□□ -0.42
TRAPPC4-204ENST00000524797 ARL2P36404 184 aa12.43□□□□□ -0.42
TRAPPC4-204ENST00000524797 MCM2P49736 904 aa12.43□□□□□ -0.42
TRAPPC4-204ENST00000524797 CSPP1Q1MSJ5 1256 aa12.43□□□□□ -0.42
TRAPPC4-204ENST00000524797 CATSPER3Q86XQ3 398 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms