RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 BHLHE22Q8NFJ8 381 aaPredicted RBP5.12□□□□□ -1.59
SKP1-212ENST00000523966 GFM2Q969S9 779 aaKnown RBP5.12□□□□□ -1.59
SKP1-212ENST00000523966 HSPBAP1Q96EW2 488 aa5.12□□□□□ -1.59
SKP1-212ENST00000523966 TEKT5Q96M29 485 aa5.12□□□□□ -1.59
SKP1-212ENST00000523966 ADI1Q9BV57 179 aa5.12□□□□□ -1.59
SKP1-212ENST00000523966 PITHD1Q9GZP4 211 aaPredicted RBP5.12□□□□□ -1.59
SKP1-212ENST00000523966 CDH19Q9H159 772 aa5.12□□□□□ -1.59
SKP1-212ENST00000523966 POLR3BQ9NW08 1133 aaPredicted RBP5.12□□□□□ -1.59
SKP1-212ENST00000523966 MAGEL2Q9UJ55 1249 aa5.12□□□□□ -1.59
SKP1-212ENST00000523966 CDY2AQ9Y6F7 541 aa5.12□□□□□ -1.59
SKP1-212ENST00000523966 RFPL1O75677 317 aa5.11□□□□□ -1.59
SKP1-212ENST00000523966 SCGB1D2O95969 90 aa5.11□□□□□ -1.59
SKP1-212ENST00000523966 HMGCRP04035 888 aa5.11□□□□□ -1.59
SKP1-212ENST00000523966 PF4V1P10720 104 aa5.11□□□□□ -1.59
SKP1-212ENST00000523966 CYP2C19P33261 490 aa5.11□□□□□ -1.59
SKP1-212ENST00000523966 MTNR1BP49286 362 aa5.11□□□□□ -1.59
SKP1-212ENST00000523966 AFF3P51826 1226 aaKnown RBP5.11□□□□□ -1.59
SKP1-212ENST00000523966 CCT2P78371 535 aaKnown RBP5.11□□□□□ -1.59
SKP1-212ENST00000523966 HTRA3P83110 453 aa5.11□□□□□ -1.59
SKP1-212ENST00000523966 TRIM25Q14258 630 aaKnown RBP5.11□□□□□ -1.59
SKP1-212ENST00000523966 KCNA10Q16322 511 aa5.11□□□□□ -1.59
SKP1-212ENST00000523966 ANO4Q32M45 955 aa5.11□□□□□ -1.59
SKP1-212ENST00000523966 MUM1L1Q5H9M0 696 aa5.11□□□□□ -1.59
SKP1-212ENST00000523966 TMEM240Q5SV17 173 aa5.11□□□□□ -1.59
SKP1-212ENST00000523966 KCNK18Q7Z418 384 aa5.11□□□□□ -1.59
SKP1-212ENST00000523966 SAPCD2Q86UD0 394 aa5.11□□□□□ -1.59
SKP1-212ENST00000523966 FAM124AQ86V42 546 aa5.11□□□□□ -1.59
SKP1-212ENST00000523966 JADE3Q92613 823 aa5.11□□□□□ -1.59
SKP1-212ENST00000523966 WDR92Q96MX6 357 aa5.11□□□□□ -1.59
SKP1-212ENST00000523966 TCF7L1Q9HCS4 588 aa5.11□□□□□ -1.59
SKP1-212ENST00000523966 SPATA6Q9NWH7 488 aaPredicted RBP5.11□□□□□ -1.59
SKP1-212ENST00000523966 FAM184BQ9ULE4 1060 aa5.11□□□□□ -1.59
SKP1-212ENST00000523966 PNMA8BQ9ULN7 279 aaPredicted RBP5.11□□□□□ -1.59
SKP1-212ENST00000523966 NOB1Q9ULX3 412 aaKnown RBP5.11□□□□□ -1.59
SKP1-212ENST00000523966 ZDHHC9Q9Y397 364 aa5.11□□□□□ -1.59
SKP1-212ENST00000523966 NPIPB6E9PJ23 425 aa5.1□□□□□ -1.59
SKP1-212ENST00000523966 FZD9O00144 591 aa5.1□□□□□ -1.59
SKP1-212ENST00000523966 NUAK1O60285 661 aa5.1□□□□□ -1.59
SKP1-212ENST00000523966 PCDHGA12O60330 932 aa5.1□□□□□ -1.59
SKP1-212ENST00000523966 NDUFS2O75306 463 aa5.1□□□□□ -1.59
SKP1-212ENST00000523966 ABLIM3O94929 683 aa5.1□□□□□ -1.59
SKP1-212ENST00000523966 TSPAN15O95858 294 aa5.1□□□□□ -1.59
SKP1-212ENST00000523966 ZNF28P17035 718 aa5.1□□□□□ -1.59
SKP1-212ENST00000523966 ATF3P18847 181 aa5.1□□□□□ -1.59
SKP1-212ENST00000523966 LINC00310P59036 64 aa5.1□□□□□ -1.59
SKP1-212ENST00000523966 CAP1Q01518 475 aa5.1□□□□□ -1.59
SKP1-212ENST00000523966 KIF23Q02241 960 aaPredicted RBP5.1□□□□□ -1.59
SKP1-212ENST00000523966 MGAT5Q09328 741 aa5.1□□□□□ -1.59
SKP1-212ENST00000523966 RTP5Q14D33 572 aa5.1□□□□□ -1.59
SKP1-212ENST00000523966 EIF4HQ15056 248 aaKnown RBP5.1□□□□□ -1.59
SKP1-212ENST00000523966 ZNF568Q3ZCX4 644 aa5.1□□□□□ -1.59
SKP1-212ENST00000523966 ZNF648Q5T619 568 aaPredicted RBP5.1□□□□□ -1.59
SKP1-212ENST00000523966 TMEM200BQ69YZ2 307 aa5.1□□□□□ -1.59
SKP1-212ENST00000523966 MCTP2Q6DN12 878 aa5.1□□□□□ -1.59
SKP1-212ENST00000523966 CIAPIN1Q6FI81 312 aa5.1□□□□□ -1.59
SKP1-212ENST00000523966 KLHDC10Q6PID8 442 aa5.1□□□□□ -1.59
SKP1-212ENST00000523966 REXO1L1PQ8IX06 675 aa5.1□□□□□ -1.59
SKP1-212ENST00000523966 CMTR2Q8IYT2 770 aaKnown RBP5.1□□□□□ -1.59
SKP1-212ENST00000523966 ZNF526Q8TF50 670 aaPredicted RBP5.1□□□□□ -1.59
SKP1-212ENST00000523966 ZCCHC14Q8WYQ9 949 aaKnown RBP5.1□□□□□ -1.59
SKP1-212ENST00000523966 SLC2A13Q96QE2 648 aa5.1□□□□□ -1.59
SKP1-212ENST00000523966 UIMC1Q96RL1 719 aa5.1□□□□□ -1.59
SKP1-212ENST00000523966 CARD11Q9BXL7 1154 aa5.1□□□□□ -1.59
SKP1-212ENST00000523966 OSBPL6Q9BZF3 934 aa5.1□□□□□ -1.59
SKP1-212ENST00000523966 ZNF277Q9NRM2 450 aaPredicted RBP5.1□□□□□ -1.59
SKP1-212ENST00000523966 GEMIN8Q9NWZ8 242 aaKnown RBP5.1□□□□□ -1.59
SKP1-212ENST00000523966 DNAI1Q9UI46 699 aa5.1□□□□□ -1.59
SKP1-212ENST00000523966 TMPRSS11EQ9UL52 423 aa5.1□□□□□ -1.59
SKP1-212ENST00000523966 DNM3Q9UQ16 869 aa5.1□□□□□ -1.59
SKP1-212ENST00000523966 VWA7Q9Y334 891 aa5.1□□□□□ -1.59
SKP1-212ENST00000523966 PCDHGA9Q9Y5G4 932 aaKnown RBP5.1□□□□□ -1.59
SKP1-212ENST00000523966 PCDHGA8Q9Y5G5 932 aa5.1□□□□□ -1.59
SKP1-212ENST00000523966 PCDHGA7Q9Y5G6 932 aa5.1□□□□□ -1.59
SKP1-212ENST00000523966 PCDHGA6Q9Y5G7 932 aa5.1□□□□□ -1.59
SKP1-212ENST00000523966 PCDHGA3Q9Y5H0 932 aa5.1□□□□□ -1.59
SKP1-212ENST00000523966 PCDHGA2Q9Y5H1 932 aa5.1□□□□□ -1.59
SKP1-212ENST00000523966 STAT5BP51692 787 aa5.09□□□□□ -1.59
SKP1-212ENST00000523966 ADKP55263 362 aaKnown RBP5.09□□□□□ -1.59
SKP1-212ENST00000523966 ANTXR2P58335 489 aa5.09□□□□□ -1.59
SKP1-212ENST00000523966 TOP3AQ13472 1001 aaPredicted RBP5.09□□□□□ -1.59
SKP1-212ENST00000523966 ODF1Q14990 250 aa5.09□□□□□ -1.59
SKP1-212ENST00000523966 MLC1Q15049 377 aa5.09□□□□□ -1.59
SKP1-212ENST00000523966 LRRC41Q15345 812 aa5.09□□□□□ -1.59
SKP1-212ENST00000523966 UAP1L1Q3KQV9 507 aa5.09□□□□□ -1.59
SKP1-212ENST00000523966 PRR31Q5SQ13 230 aa5.09□□□□□ -1.59
SKP1-212ENST00000523966 GJC2Q5T442 439 aaPredicted RBP5.09□□□□□ -1.59
SKP1-212ENST00000523966 TCERG1LQ5VWI1 586 aa5.09□□□□□ -1.59
SKP1-212ENST00000523966 OGFOD2Q6N063 350 aa5.09□□□□□ -1.59
SKP1-212ENST00000523966 CXorf57Q6NSI4 855 aaKnown RBP5.09□□□□□ -1.59
SKP1-212ENST00000523966 BTNL9Q6UXG8 535 aa5.09□□□□□ -1.59
SKP1-212ENST00000523966 Q6ZUG5 572 aa5.09□□□□□ -1.59
SKP1-212ENST00000523966 GAREM2Q75VX8 874 aa5.09□□□□□ -1.59
SKP1-212ENST00000523966 CARFQ8N187 725 aa5.09□□□□□ -1.59
SKP1-212ENST00000523966 NUDT10Q8NFP7 164 aa5.09□□□□□ -1.59
SKP1-212ENST00000523966 GCDHQ92947 438 aaPredicted RBP5.09□□□□□ -1.59
SKP1-212ENST00000523966 TSR2Q969E8 191 aaKnown RBP5.09□□□□□ -1.59
SKP1-212ENST00000523966 NUDT11Q96G61 164 aa5.09□□□□□ -1.59
SKP1-212ENST00000523966 LCORQ96JN0 433 aaPredicted RBP5.09□□□□□ -1.59
SKP1-212ENST00000523966 NUP88Q99567 741 aaPredicted RBP5.09□□□□□ -1.59
SKP1-212ENST00000523966 RTFDC1Q9BY42 306 aaPredicted RBP5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms