RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 FOXD4L5Q5VV16 416 aaPredicted RBP19.88■□□□□ 0.77
CLK4-211ENST00000522556 HAUS3Q68CZ6 603 aa19.88■□□□□ 0.77
CLK4-211ENST00000522556 RNF149Q8NC42 400 aa19.88■□□□□ 0.77
CLK4-211ENST00000522556 MAFAQ8NHW3 353 aaPredicted RBP19.88■□□□□ 0.77
CLK4-211ENST00000522556 FOXD4L4Q8WXT5 416 aaPredicted RBP19.88■□□□□ 0.77
CLK4-211ENST00000522556 BSNDQ8WZ55 320 aa19.88■□□□□ 0.77
CLK4-211ENST00000522556 CCDC43Q96MW1 224 aaKnown RBP19.88■□□□□ 0.77
CLK4-211ENST00000522556 POLR3FQ9H1D9 316 aaPredicted RBP19.88■□□□□ 0.77
CLK4-211ENST00000522556 RNF19AQ9NV58 838 aa19.88■□□□□ 0.77
CLK4-211ENST00000522556 DBR1Q9UK59 544 aaKnown RBP19.88■□□□□ 0.77
CLK4-211ENST00000522556 KIAA1024Q9UPX6 916 aa19.88■□□□□ 0.77
CLK4-211ENST00000522556 REV3LO60673 3130 aa19.87■□□□□ 0.77
CLK4-211ENST00000522556 STX6O43752 255 aa19.87■□□□□ 0.77
CLK4-211ENST00000522556 FGFR1P11362 822 aa19.87■□□□□ 0.77
CLK4-211ENST00000522556 ATF7P17544 494 aaPredicted RBP19.87■□□□□ 0.77
CLK4-211ENST00000522556 IGFBP4P22692 258 aa19.87■□□□□ 0.77
CLK4-211ENST00000522556 GLRA2P23416 452 aa19.87■□□□□ 0.77
CLK4-211ENST00000522556 GRB10Q13322 594 aa19.87■□□□□ 0.77
CLK4-211ENST00000522556 PKP1Q13835 747 aa19.87■□□□□ 0.77
CLK4-211ENST00000522556 PDIA5Q14554 519 aa19.87■□□□□ 0.77
CLK4-211ENST00000522556 FAM102BQ5T8I3 360 aa19.87■□□□□ 0.77
CLK4-211ENST00000522556 PADI6Q6TGC4 694 aa19.87■□□□□ 0.77
CLK4-211ENST00000522556 LRRC15Q8TF66 581 aa19.87■□□□□ 0.77
CLK4-211ENST00000522556 PNMA5Q96PV4 448 aa19.87■□□□□ 0.77
CLK4-211ENST00000522556 NACC1Q96RE7 527 aa19.87■□□□□ 0.77
CLK4-211ENST00000522556 TGS1Q96RS0 853 aaKnown RBP19.87■□□□□ 0.77
CLK4-211ENST00000522556 PLIN2Q99541 437 aa19.87■□□□□ 0.77
CLK4-211ENST00000522556 BHMT2Q9H2M3 363 aa19.87■□□□□ 0.77
CLK4-211ENST00000522556 GAS2O43903 313 aaKnown RBP19.86■□□□□ 0.77
CLK4-211ENST00000522556 PTPAQ15257 358 aa19.86■□□□□ 0.77
CLK4-211ENST00000522556 ZRSR1Q15695 479 aaKnown RBP19.86■□□□□ 0.77
CLK4-211ENST00000522556 SLC24A5Q71RS6 500 aa19.86■□□□□ 0.77
CLK4-211ENST00000522556 TCP11Q8WWU5 503 aa19.86■□□□□ 0.77
CLK4-211ENST00000522556 GAS2L1Q99501 681 aaPredicted RBP19.86■□□□□ 0.77
CLK4-211ENST00000522556 MRPL42Q9Y6G3 142 aaKnown RBP19.86■□□□□ 0.77
CLK4-211ENST00000522556 TRANK1O15050 2925 aa19.86■□□□□ 0.77
CLK4-211ENST00000522556 PRRC2BQ5JSZ5 2229 aaKnown RBP19.86■□□□□ 0.77
CLK4-211ENST00000522556 ARHGEF35A5YM69 484 aa19.85■□□□□ 0.77
CLK4-211ENST00000522556 XRCC6P12956 609 aaKnown RBP eCLIP19.85■□□□□ 0.77
CLK4-211ENST00000522556 FAM189BP81408 668 aa19.85■□□□□ 0.77
CLK4-211ENST00000522556 CEBPZQ03701 1054 aaKnown RBP19.85■□□□□ 0.77
CLK4-211ENST00000522556 ZNF710Q8N1W2 664 aa19.85■□□□□ 0.77
CLK4-211ENST00000522556 PPM1EQ8WY54 764 aa19.85■□□□□ 0.77
CLK4-211ENST00000522556 USP28Q96RU2 1077 aa19.85■□□□□ 0.77
CLK4-211ENST00000522556 PRDM6Q9NQX0 595 aa19.85■□□□□ 0.77
CLK4-211ENST00000522556 C1orf112Q9NSG2 853 aa19.85■□□□□ 0.77
CLK4-211ENST00000522556 PIN4Q9Y237 131 aaKnown RBP19.85■□□□□ 0.77
CLK4-211ENST00000522556 PRUNE2Q8WUY3 3088 aa19.84■□□□□ 0.77
CLK4-211ENST00000522556 MEIS3P2A8K0S8 358 aa19.84■□□□□ 0.77
CLK4-211ENST00000522556 SFPQP23246 707 aaKnown RBP eCLIP19.84■□□□□ 0.77
CLK4-211ENST00000522556 PTENP60484 403 aa19.84■□□□□ 0.77
CLK4-211ENST00000522556 BTG3Q14201 252 aaPredicted RBP19.84■□□□□ 0.77
CLK4-211ENST00000522556 CCDC85BQ15834 202 aaPredicted RBP19.84■□□□□ 0.77
CLK4-211ENST00000522556 LONRF3Q496Y0 759 aa19.84■□□□□ 0.77
CLK4-211ENST00000522556 EPC2Q52LR7 807 aa19.84■□□□□ 0.77
CLK4-211ENST00000522556 ODR4Q5SWX8 454 aa19.84■□□□□ 0.77
CLK4-211ENST00000522556 KRT79Q5XKE5 535 aa19.84■□□□□ 0.77
CLK4-211ENST00000522556 ARL6IP4Q66PJ3 421 aaKnown RBP19.84■□□□□ 0.77
CLK4-211ENST00000522556 CATSPER4Q7RTX7 472 aa19.84■□□□□ 0.77
CLK4-211ENST00000522556 ECHDC2Q86YB7 292 aa19.84■□□□□ 0.77
CLK4-211ENST00000522556 EXOC8Q8IYI6 725 aa19.84■□□□□ 0.77
CLK4-211ENST00000522556 MICALL1Q8N3F8 863 aa19.84■□□□□ 0.77
CLK4-211ENST00000522556 FIBCD1Q8N539 461 aa19.84■□□□□ 0.77
CLK4-211ENST00000522556 RUSC1Q9BVN2 902 aa19.84■□□□□ 0.77
CLK4-211ENST00000522556 RAB34Q9BZG1 259 aa19.84■□□□□ 0.77
CLK4-211ENST00000522556 LRFN2Q9ULH4 789 aa19.84■□□□□ 0.77
CLK4-211ENST00000522556 PCDHB7Q9Y5E2 793 aa19.84■□□□□ 0.77
CLK4-211ENST00000522556 PLXNA4Q9HCM2 1894 aa19.84■□□□□ 0.77
CLK4-211ENST00000522556 STAG3L1P0CL83 205 aa19.83■□□□□ 0.77
CLK4-211ENST00000522556 CYP11B2P19099 503 aa19.83■□□□□ 0.77
CLK4-211ENST00000522556 MUTP22033 750 aa19.83■□□□□ 0.77
CLK4-211ENST00000522556 MARCKSP29966 332 aaPredicted RBP19.83■□□□□ 0.77
CLK4-211ENST00000522556 MBTD1Q05BQ5 628 aa19.83■□□□□ 0.77
CLK4-211ENST00000522556 CLLU1OSQ5K130 101 aa19.83■□□□□ 0.77
CLK4-211ENST00000522556 SPECC1Q5M775 1068 aa19.83■□□□□ 0.77
CLK4-211ENST00000522556 USP49Q70CQ1 688 aa19.83■□□□□ 0.77
CLK4-211ENST00000522556 ZNF598Q86UK7 904 aaKnown RBP19.83■□□□□ 0.77
CLK4-211ENST00000522556 TMEM192Q8IY95 271 aa19.83■□□□□ 0.77
CLK4-211ENST00000522556 RNF169Q8NCN4 708 aa19.83■□□□□ 0.77
CLK4-211ENST00000522556 FBXO22Q8NEZ5 403 aa19.83■□□□□ 0.77
CLK4-211ENST00000522556 LPPQ93052 612 aa19.83■□□□□ 0.77
CLK4-211ENST00000522556 KIFC3Q9BVG8 833 aa19.83■□□□□ 0.77
CLK4-211ENST00000522556 AGPAT5Q9NUQ2 364 aa19.83■□□□□ 0.77
CLK4-211ENST00000522556 TMEM161AQ9NX61 479 aa19.83■□□□□ 0.77
CLK4-211ENST00000522556 MTCH2Q9Y6C9 303 aa19.83■□□□□ 0.77
CLK4-211ENST00000522556 TBKBP1A7MCY6 615 aa19.82■□□□□ 0.76
CLK4-211ENST00000522556 B4GALT5O43286 388 aa19.82■□□□□ 0.76
CLK4-211ENST00000522556 TSPAN1O60635 241 aa19.82■□□□□ 0.76
CLK4-211ENST00000522556 EDN1P05305 212 aa19.82■□□□□ 0.76
CLK4-211ENST00000522556 ZSCAN20P17040 1043 aaPredicted RBP19.82■□□□□ 0.76
CLK4-211ENST00000522556 HOXA11P31270 313 aaPredicted RBP19.82■□□□□ 0.76
CLK4-211ENST00000522556 CTNNB1P35222 781 aa19.82■□□□□ 0.76
CLK4-211ENST00000522556 PHKA2P46019 1235 aa19.82■□□□□ 0.76
CLK4-211ENST00000522556 CDC42EP1Q00587 391 aa19.82■□□□□ 0.76
CLK4-211ENST00000522556 AMHR2Q16671 573 aa19.82■□□□□ 0.76
CLK4-211ENST00000522556 TMEM119Q4V9L6 283 aa19.82■□□□□ 0.76
CLK4-211ENST00000522556 HYIQ5T013 277 aa19.82■□□□□ 0.76
CLK4-211ENST00000522556 TWF2Q6IBS0 349 aaKnown RBP19.82■□□□□ 0.76
CLK4-211ENST00000522556 SRGAP1Q7Z6B7 1085 aa19.82■□□□□ 0.76
CLK4-211ENST00000522556 CMTR2Q8IYT2 770 aaKnown RBP19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms