RNA–Protein interactions for RNA: ENST00000522371.5

HDAC2-213, Transcript of histone deacetylase 2, humanhuman

TSL 4

Gene HDAC2, Length 502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-213ENST00000522371 MIEF2Q96C03 454 aa4.57□□□□□ -1.68
HDAC2-213ENST00000522371 SLC7A6OSQ96CW6 309 aaPredicted RBP4.57□□□□□ -1.68
HDAC2-213ENST00000522371 CLIP3Q96DZ5 547 aa4.57□□□□□ -1.68
HDAC2-213ENST00000522371 MFSD3Q96ES6 412 aa4.57□□□□□ -1.68
HDAC2-213ENST00000522371 SCLYQ96I15 445 aa4.57□□□□□ -1.68
HDAC2-213ENST00000522371 FOXB1Q99853 325 aa4.57□□□□□ -1.68
HDAC2-213ENST00000522371 TARS2Q9BW92 718 aaKnown RBP4.57□□□□□ -1.68
HDAC2-213ENST00000522371 KRTAP9-8Q9BYQ0 159 aa4.57□□□□□ -1.68
HDAC2-213ENST00000522371 SH3BP1Q9Y3L3 701 aa4.57□□□□□ -1.68
HDAC2-213ENST00000522371 A0A087X0B3 334 aa4.56□□□□□ -1.68
HDAC2-213ENST00000522371 KPNA6O60684 536 aa4.56□□□□□ -1.68
HDAC2-213ENST00000522371 HMGB1P09429 215 aaKnown RBP4.56□□□□□ -1.68
HDAC2-213ENST00000522371 ATP2C1P98194 919 aaPredicted RBP4.56□□□□□ -1.68
HDAC2-213ENST00000522371 IRF9Q00978 393 aa4.56□□□□□ -1.68
HDAC2-213ENST00000522371 PCBP1Q15365 356 aaKnown RBP eCLIP4.56□□□□□ -1.683e-25■■■□□ 15.8
HDAC2-213ENST00000522371 ARHGAP44Q17R89 818 aa4.56□□□□□ -1.68
HDAC2-213ENST00000522371 FNDC3BQ53EP0 1204 aaKnown RBP4.56□□□□□ -1.68
HDAC2-213ENST00000522371 CATSPEREQ5SY80 951 aa4.56□□□□□ -1.68
HDAC2-213ENST00000522371 STRA8Q7Z7C7 330 aa4.56□□□□□ -1.68
HDAC2-213ENST00000522371 LRRTM3Q86VH5 581 aa4.56□□□□□ -1.68
HDAC2-213ENST00000522371 DNAJC10Q8IXB1 793 aa4.56□□□□□ -1.68
HDAC2-213ENST00000522371 ERCC4Q92889 916 aaPredicted RBP4.56□□□□□ -1.68
HDAC2-213ENST00000522371 ZG16BQ96DA0 208 aa4.56□□□□□ -1.68
HDAC2-213ENST00000522371 TRIM39Q9HCM9 518 aa4.56□□□□□ -1.68
HDAC2-213ENST00000522371 NOP58Q9Y2X3 529 aaKnown RBP4.56□□□□□ -1.68
HDAC2-213ENST00000522371 TMEM191CA6NGB0 347 aa4.55□□□□□ -1.68
HDAC2-213ENST00000522371 GOLGA8BA8MQT2 603 aa4.55□□□□□ -1.68
HDAC2-213ENST00000522371 KCNQ2O43526 872 aa4.55□□□□□ -1.68
HDAC2-213ENST00000522371 RAMP2O60895 175 aa4.55□□□□□ -1.68
HDAC2-213ENST00000522371 JMJD7P0C870 316 aa4.55□□□□□ -1.68
HDAC2-213ENST00000522371 FNTBP49356 437 aa4.55□□□□□ -1.68
HDAC2-213ENST00000522371 MAN2A2P49641 1150 aa4.55□□□□□ -1.68
HDAC2-213ENST00000522371 NANOS3P60323 173 aaKnown RBP4.55□□□□□ -1.68
HDAC2-213ENST00000522371 ROM1Q03395 351 aa4.55□□□□□ -1.68
HDAC2-213ENST00000522371 SAFB2Q14151 953 aaKnown RBP eCLIP4.55□□□□□ -1.68
HDAC2-213ENST00000522371 GAGE13Q4V321 117 aa4.55□□□□□ -1.68
HDAC2-213ENST00000522371 THNSL2Q86YJ6 484 aa4.55□□□□□ -1.68
HDAC2-213ENST00000522371 SYNPOQ8N3V7 929 aa4.55□□□□□ -1.68
HDAC2-213ENST00000522371 ZCRB1Q8TBF4 217 aaKnown RBP4.55□□□□□ -1.68
HDAC2-213ENST00000522371 BOCQ9BWV1 1114 aa4.55□□□□□ -1.68
HDAC2-213ENST00000522371 MRPL4Q9BYD3 311 aaKnown RBP4.55□□□□□ -1.68
HDAC2-213ENST00000522371 SLC2A4RGQ9NR83 387 aa4.55□□□□□ -1.68
HDAC2-213ENST00000522371 HECAQ9UBI9 543 aaPredicted RBP4.55□□□□□ -1.68
HDAC2-213ENST00000522371 DENND2AQ9ULE3 1009 aa4.55□□□□□ -1.68
HDAC2-213ENST00000522371 PLAAQ9Y263 795 aa4.55□□□□□ -1.68
HDAC2-213ENST00000522371 PRKAB1Q9Y478 270 aa4.55□□□□□ -1.68
HDAC2-213ENST00000522371 TCRBV16S1A1N1A0A5B0 115 aa4.54□□□□□ -1.68
HDAC2-213ENST00000522371 RAB11FIP3O75154 756 aa4.54□□□□□ -1.68
HDAC2-213ENST00000522371 RFPL3O75679 317 aa4.54□□□□□ -1.68
HDAC2-213ENST00000522371 ZBTB48P10074 688 aaPredicted RBP4.54□□□□□ -1.68
HDAC2-213ENST00000522371 PTGS2P35354 604 aa4.54□□□□□ -1.68
HDAC2-213ENST00000522371 BPIFB4P59827 614 aa4.54□□□□□ -1.68
HDAC2-213ENST00000522371 STRN3Q13033 797 aa4.54□□□□□ -1.68
HDAC2-213ENST00000522371 DGKDQ16760 1214 aa4.54□□□□□ -1.68
HDAC2-213ENST00000522371 TMEM177Q53S58 311 aa4.54□□□□□ -1.68
HDAC2-213ENST00000522371 PIK3R6Q5UE93 754 aa4.54□□□□□ -1.68
HDAC2-213ENST00000522371 FSTL4Q6MZW2 842 aa4.54□□□□□ -1.68
HDAC2-213ENST00000522371 FAM111BQ6SJ93 734 aa4.54□□□□□ -1.68
HDAC2-213ENST00000522371 GAREM2Q75VX8 874 aa4.54□□□□□ -1.68
HDAC2-213ENST00000522371 ZNF627Q7L945 461 aa4.54□□□□□ -1.68
HDAC2-213ENST00000522371 OTOP1Q7RTM1 612 aa4.54□□□□□ -1.68
HDAC2-213ENST00000522371 RTN4RL1Q86UN2 441 aaPredicted RBP4.54□□□□□ -1.68
HDAC2-213ENST00000522371 IGSF22Q8N9C0 903 aa4.54□□□□□ -1.68
HDAC2-213ENST00000522371 CHAC2Q8WUX2 184 aa4.54□□□□□ -1.68
HDAC2-213ENST00000522371 FOXRED1Q96CU9 486 aaPredicted RBP4.54□□□□□ -1.68
HDAC2-213ENST00000522371 RPL10LQ96L21 214 aaKnown RBP4.54□□□□□ -1.68
HDAC2-213ENST00000522371 DMRT1Q9Y5R6 373 aa4.54□□□□□ -1.68
HDAC2-213ENST00000522371 RBM8AQ9Y5S9 174 aaKnown RBP4.54□□□□□ -1.68
HDAC2-213ENST00000522371 C2orf78A6NCI8 922 aa4.53□□□□□ -1.68
HDAC2-213ENST00000522371 GSG1L2A8MUP6 293 aa4.53□□□□□ -1.68
HDAC2-213ENST00000522371 TRAF5O00463 557 aa4.53□□□□□ -1.68
HDAC2-213ENST00000522371 KCNA6P17658 529 aa4.53□□□□□ -1.68
HDAC2-213ENST00000522371 CDK11BP21127 795 aaKnown RBP4.53□□□□□ -1.68
HDAC2-213ENST00000522371 STAT3P40763 770 aa4.53□□□□□ -1.68
HDAC2-213ENST00000522371 CDKN1CP49918 316 aaPredicted RBP4.53□□□□□ -1.68
HDAC2-213ENST00000522371 SCNN1GP51170 649 aa4.53□□□□□ -1.68
HDAC2-213ENST00000522371 SMAD3P84022 425 aaKnown RBP4.53□□□□□ -1.68
HDAC2-213ENST00000522371 KRTAP1-1Q07627 177 aa4.53□□□□□ -1.68
HDAC2-213ENST00000522371 ELAVL1Q15717 326 aaKnown RBP4.53□□□□□ -1.68
HDAC2-213ENST00000522371 KRTAP15-1Q3LI76 137 aa4.53□□□□□ -1.68
HDAC2-213ENST00000522371 CFAP100Q494V2 611 aa4.53□□□□□ -1.68
HDAC2-213ENST00000522371 MFSD5Q6N075 450 aa4.53□□□□□ -1.68
HDAC2-213ENST00000522371 ABHD17CQ6PCB6 329 aa4.53□□□□□ -1.68
HDAC2-213ENST00000522371 DDX42Q86XP3 938 aaKnown RBP eCLIP4.53□□□□□ -1.68
HDAC2-213ENST00000522371 RPUSD2Q8IZ73 545 aaKnown RBP4.53□□□□□ -1.68
HDAC2-213ENST00000522371 NXPE1Q8N323 547 aa4.53□□□□□ -1.68
HDAC2-213ENST00000522371 ANKRD53Q8N9V6 530 aa4.53□□□□□ -1.68
HDAC2-213ENST00000522371 ATL2Q8NHH9 583 aa4.53□□□□□ -1.68
HDAC2-213ENST00000522371 MAML3Q96JK9 1138 aa4.53□□□□□ -1.68
HDAC2-213ENST00000522371 CRAMP1Q96RY5 1269 aa4.53□□□□□ -1.68
HDAC2-213ENST00000522371 GPHA2Q96T91 129 aa4.53□□□□□ -1.68
HDAC2-213ENST00000522371 TCF25Q9BQ70 676 aa4.53□□□□□ -1.68
HDAC2-213ENST00000522371 MTFR1LQ9H019 292 aa4.53□□□□□ -1.68
HDAC2-213ENST00000522371 CAAP1Q9H8G2 361 aa4.53□□□□□ -1.68
HDAC2-213ENST00000522371 ACSS2Q9NR19 701 aa4.53□□□□□ -1.68
HDAC2-213ENST00000522371 KCMF1Q9P0J7 381 aa4.53□□□□□ -1.68
HDAC2-213ENST00000522371 MAGEC2Q9UBF1 373 aaPredicted RBP4.53□□□□□ -1.68
HDAC2-213ENST00000522371 XDHP47989 1333 aa4.52□□□□□ -1.69
HDAC2-213ENST00000522371 FAM83GA6ND36 823 aa4.52□□□□□ -1.69
HDAC2-213ENST00000522371 B4E1Z4 1266 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms