RNA–Protein interactions for RNA: ENST00000521283.1

TRIM35-204, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-204ENST00000521283 Q6ZNB5 142 aa11.41□□□□□ -0.58
TRIM35-204ENST00000521283 ZNF410Q86VK4 478 aa11.41□□□□□ -0.58
TRIM35-204ENST00000521283 NOSTRINQ8IVI9 506 aa11.41□□□□□ -0.58
TRIM35-204ENST00000521283 LINC01465Q8N7H1 131 aa11.41□□□□□ -0.58
TRIM35-204ENST00000521283 TCP11Q8WWU5 503 aa11.41□□□□□ -0.58
TRIM35-204ENST00000521283 RAB34Q9BZG1 259 aa11.41□□□□□ -0.58
TRIM35-204ENST00000521283 TTC12Q9H892 705 aaPredicted RBP11.41□□□□□ -0.58
TRIM35-204ENST00000521283 CHST12Q9NRB3 414 aa11.41□□□□□ -0.58
TRIM35-204ENST00000521283 GJB4Q9NTQ9 266 aa11.41□□□□□ -0.58
TRIM35-204ENST00000521283 CHD9Q3L8U1 2897 aa11.41□□□□□ -0.58
TRIM35-204ENST00000521283 DENND3A2RUS2 1198 aa11.4□□□□□ -0.58
TRIM35-204ENST00000521283 LINC01553A4QN01 128 aa11.4□□□□□ -0.58
TRIM35-204ENST00000521283 HOXA2O43364 376 aa11.4□□□□□ -0.58
TRIM35-204ENST00000521283 GPR32O75388 356 aa11.4□□□□□ -0.58
TRIM35-204ENST00000521283 SKIP12755 728 aa11.4□□□□□ -0.58
TRIM35-204ENST00000521283 IGFBP4P22692 258 aa11.4□□□□□ -0.58
TRIM35-204ENST00000521283 U2AF2P26368 475 aaKnown RBP eCLIP11.4□□□□□ -0.58
TRIM35-204ENST00000521283 ANP32AP39687 249 aaKnown RBP11.4□□□□□ -0.58
TRIM35-204ENST00000521283 NLRP11P59045 1033 aaKnown RBP11.4□□□□□ -0.58
TRIM35-204ENST00000521283 TMEM62Q0P6H9 643 aa11.4□□□□□ -0.58
TRIM35-204ENST00000521283 ST3GAL1Q11201 340 aa11.4□□□□□ -0.58
TRIM35-204ENST00000521283 NFX1Q12986 1120 aaKnown RBP11.4□□□□□ -0.58
TRIM35-204ENST00000521283 PTPROQ16827 1216 aa11.4□□□□□ -0.58
TRIM35-204ENST00000521283 TMEM266Q2M3C6 531 aa11.4□□□□□ -0.58
TRIM35-204ENST00000521283 TCTN1Q2MV58 587 aa11.4□□□□□ -0.58
TRIM35-204ENST00000521283 PUS10Q3MIT2 529 aaKnown RBP11.4□□□□□ -0.58
TRIM35-204ENST00000521283 SLC24A5Q71RS6 500 aa11.4□□□□□ -0.58
TRIM35-204ENST00000521283 FIBCD1Q8N539 461 aa11.4□□□□□ -0.58
TRIM35-204ENST00000521283 ERMNQ8TAM6 284 aa11.4□□□□□ -0.58
TRIM35-204ENST00000521283 ARNTL2Q8WYA1 636 aa11.4□□□□□ -0.58
TRIM35-204ENST00000521283 MTMR9Q96QG7 549 aa11.4□□□□□ -0.58
TRIM35-204ENST00000521283 UIMC1Q96RL1 719 aa11.4□□□□□ -0.58
TRIM35-204ENST00000521283 PLVAPQ9BX97 442 aa11.4□□□□□ -0.58
TRIM35-204ENST00000521283 GCOM2Q9BZD3 368 aaPredicted RBP11.4□□□□□ -0.58
TRIM35-204ENST00000521283 ELAC1Q9H777 363 aaKnown RBP11.4□□□□□ -0.58
TRIM35-204ENST00000521283 AGO3Q9H9G7 860 aaKnown RBP11.4□□□□□ -0.58
TRIM35-204ENST00000521283 SUGCTQ9HAC7 445 aa11.4□□□□□ -0.58
TRIM35-204ENST00000521283 CYP26B1Q9NR63 512 aa11.4□□□□□ -0.58
TRIM35-204ENST00000521283 RGS18Q9NS28 235 aa11.4□□□□□ -0.58
TRIM35-204ENST00000521283 ANKEF1Q9NU02 776 aa11.4□□□□□ -0.58
TRIM35-204ENST00000521283 DACT1Q9NYF0 836 aa11.4□□□□□ -0.58
TRIM35-204ENST00000521283 LRFN2Q9ULH4 789 aa11.4□□□□□ -0.58
TRIM35-204ENST00000521283 GINS2Q9Y248 185 aa11.4□□□□□ -0.58
TRIM35-204ENST00000521283 PCDHB7Q9Y5E2 793 aa11.4□□□□□ -0.58
TRIM35-204ENST00000521283 TRANK1O15050 2925 aa11.4□□□□□ -0.58
TRIM35-204ENST00000521283 LCE2BO14633 110 aa11.39□□□□□ -0.59
TRIM35-204ENST00000521283 NR1I2O75469 434 aa11.39□□□□□ -0.59
TRIM35-204ENST00000521283 DGKIO75912 1065 aa11.39□□□□□ -0.59
TRIM35-204ENST00000521283 UPP2O95045 317 aa11.39□□□□□ -0.59
TRIM35-204ENST00000521283 S1PR4O95977 384 aa11.39□□□□□ -0.59
TRIM35-204ENST00000521283 SFPQP23246 707 aaKnown RBP eCLIP11.39□□□□□ -0.59
TRIM35-204ENST00000521283 YWHABP31946 246 aaKnown RBP11.39□□□□□ -0.59
TRIM35-204ENST00000521283 SARSP49591 514 aaKnown RBP11.39□□□□□ -0.59
TRIM35-204ENST00000521283 GPC3P51654 580 aa11.39□□□□□ -0.59
TRIM35-204ENST00000521283 SPIRE1Q08AE8 756 aa11.39□□□□□ -0.59
TRIM35-204ENST00000521283 MXD4Q14582 209 aaPredicted RBP11.39□□□□□ -0.59
TRIM35-204ENST00000521283 UGCGQ16739 394 aa11.39□□□□□ -0.59
TRIM35-204ENST00000521283 AAK1Q2M2I8 961 aa11.39□□□□□ -0.59
TRIM35-204ENST00000521283 KIZQ2M2Z5 673 aa11.39□□□□□ -0.59
TRIM35-204ENST00000521283 MTERF2Q49AM1 385 aa11.39□□□□□ -0.59
TRIM35-204ENST00000521283 EARS2Q5JPH6 523 aaKnown RBP11.39□□□□□ -0.59
TRIM35-204ENST00000521283 NCAPH2Q6IBW4 605 aa11.39□□□□□ -0.59
TRIM35-204ENST00000521283 ANO5Q75V66 913 aa11.39□□□□□ -0.59
TRIM35-204ENST00000521283 TRMT1LQ7Z2T5 733 aaKnown RBP11.39□□□□□ -0.59
TRIM35-204ENST00000521283 NLRC5Q86WI3 1866 aa11.39□□□□□ -0.59
TRIM35-204ENST00000521283 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.39□□□□□ -0.59
TRIM35-204ENST00000521283 SCUBE3Q8IX30 993 aa11.39□□□□□ -0.59
TRIM35-204ENST00000521283 CMTR2Q8IYT2 770 aaKnown RBP11.39□□□□□ -0.59
TRIM35-204ENST00000521283 KCTD17Q8N5Z5 321 aa11.39□□□□□ -0.59
TRIM35-204ENST00000521283 BANK1Q8NDB2 785 aa11.39□□□□□ -0.59
TRIM35-204ENST00000521283 ATXN2LQ8WWM7 1075 aaKnown RBP11.39□□□□□ -0.59
TRIM35-204ENST00000521283 SYMPKQ92797 1274 aaKnown RBP11.39□□□□□ -0.59
TRIM35-204ENST00000521283 ZNF689Q96CS4 500 aaPredicted RBP11.39□□□□□ -0.59
TRIM35-204ENST00000521283 TMX3Q96JJ7 454 aa11.39□□□□□ -0.59
TRIM35-204ENST00000521283 CEP170P1Q96L14 293 aa11.39□□□□□ -0.59
TRIM35-204ENST00000521283 SCLT1Q96NL6 688 aa11.39□□□□□ -0.59
TRIM35-204ENST00000521283 HSD17B14Q9BPX1 270 aa11.39□□□□□ -0.59
TRIM35-204ENST00000521283 LXNQ9BS40 222 aa11.39□□□□□ -0.59
TRIM35-204ENST00000521283 ANP32EQ9BTT0 268 aa11.39□□□□□ -0.59
TRIM35-204ENST00000521283 LMAN2LQ9H0V9 348 aa11.39□□□□□ -0.59
TRIM35-204ENST00000521283 ERVK-5Q9HDB9 667 aa11.39□□□□□ -0.59
TRIM35-204ENST00000521283 TUFT1Q9NNX1 390 aa11.39□□□□□ -0.59
TRIM35-204ENST00000521283 ST3GAL5Q9UNP4 418 aa11.39□□□□□ -0.59
TRIM35-204ENST00000521283 COG5Q9UP83 839 aa11.39□□□□□ -0.59
TRIM35-204ENST00000521283 NOC2LQ9Y3T9 749 aaKnown RBP11.39□□□□□ -0.59
TRIM35-204ENST00000521283 ADGRA3Q8IWK6 1321 aa11.38□□□□□ -0.59
TRIM35-204ENST00000521283 C5orf67F2Z3F1 127 aa11.38□□□□□ -0.59
TRIM35-204ENST00000521283 EML1O00423 815 aa11.38□□□□□ -0.59
TRIM35-204ENST00000521283 DGAT1O75907 488 aa11.38□□□□□ -0.59
TRIM35-204ENST00000521283 SLITRK3O94933 977 aa11.38□□□□□ -0.59
TRIM35-204ENST00000521283 STBD1O95210 358 aa11.38□□□□□ -0.59
TRIM35-204ENST00000521283 EOMESO95936 686 aa11.38□□□□□ -0.59
TRIM35-204ENST00000521283 VTNP04004 478 aa11.38□□□□□ -0.59
TRIM35-204ENST00000521283 DARSP14868 501 aaKnown RBP11.38□□□□□ -0.59
TRIM35-204ENST00000521283 PDCP20941 246 aa11.38□□□□□ -0.59
TRIM35-204ENST00000521283 TXKP42681 527 aa11.38□□□□□ -0.59
TRIM35-204ENST00000521283 CLCN3P51790 818 aa11.38□□□□□ -0.59
TRIM35-204ENST00000521283 POLGP54098 1239 aaPredicted RBP11.38□□□□□ -0.59
TRIM35-204ENST00000521283 POU5F1BQ06416 359 aa11.38□□□□□ -0.59
TRIM35-204ENST00000521283 NCBP1Q09161 790 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms