RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 GOLGA6L19H0YKK7 550 aa16.58■□□□□ 0.25
SREK1-209ENST00000520953 ASGR1P07306 291 aa16.58■□□□□ 0.25
SREK1-209ENST00000520953 HSPA1AP0DMV8 641 aaKnown RBP16.58■□□□□ 0.25
SREK1-209ENST00000520953 HSPA1BP0DMV9 641 aaKnown RBP16.58■□□□□ 0.25
SREK1-209ENST00000520953 NCKAP1LP55160 1127 aa16.58■□□□□ 0.25
SREK1-209ENST00000520953 DMP1Q13316 513 aaPredicted RBP16.58■□□□□ 0.25
SREK1-209ENST00000520953 STIM1Q13586 685 aa16.58■□□□□ 0.25
SREK1-209ENST00000520953 CAPSQ13938 189 aa16.58■□□□□ 0.25
SREK1-209ENST00000520953 BRDTQ58F21 947 aaPredicted RBP16.58■□□□□ 0.25
SREK1-209ENST00000520953 MTHFD1LQ6UB35 978 aa16.58■□□□□ 0.25
SREK1-209ENST00000520953 TMEM161BQ8NDZ6 487 aa16.58■□□□□ 0.25
SREK1-209ENST00000520953 HDAC6Q9UBN7 1215 aa16.58■□□□□ 0.25
SREK1-209ENST00000520953 SEL1LQ9UBV2 794 aa16.58■□□□□ 0.25
SREK1-209ENST00000520953 FRMPD3Q5JV73 1810 aa16.58■□□□□ 0.25
SREK1-209ENST00000520953 SCN10AQ9Y5Y9 1956 aa16.58■□□□□ 0.24
SREK1-209ENST00000520953 ZCWPW2Q504Y3 356 aa16.58■□□□□ 0.24
SREK1-209ENST00000520953 SPATA1Q5VX52 437 aa16.58■□□□□ 0.24
SREK1-209ENST00000520953 TAS1R3Q7RTX0 852 aa16.58■□□□□ 0.24
SREK1-209ENST00000520953 HAUS6Q7Z4H7 955 aa16.58■□□□□ 0.24
SREK1-209ENST00000520953 LINC01465Q8N7H1 131 aa16.58■□□□□ 0.24
SREK1-209ENST00000520953 ZNF507Q8TCN5 953 aa16.58■□□□□ 0.24
SREK1-209ENST00000520953 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.58■□□□□ 0.241e-5■■■□□ 18
SREK1-209ENST00000520953 SPC25Q9HBM1 224 aa16.58■□□□□ 0.24
SREK1-209ENST00000520953 KMT5AQ9NQR1 393 aa16.58■□□□□ 0.24
SREK1-209ENST00000520953 TGFB1I1O43294 461 aa16.57■□□□□ 0.24
SREK1-209ENST00000520953 EDN1P05305 212 aa16.57■□□□□ 0.24
SREK1-209ENST00000520953 NKX3-2P78367 333 aa16.57■□□□□ 0.24
SREK1-209ENST00000520953 BMT2Q1RMZ1 405 aa16.57■□□□□ 0.24
SREK1-209ENST00000520953 SLC9C1Q4G0N8 1177 aa16.57■□□□□ 0.24
SREK1-209ENST00000520953 RUFY4Q6ZNE9 571 aa16.57■□□□□ 0.24
SREK1-209ENST00000520953 IRF2BP1Q8IU81 584 aa16.57■□□□□ 0.24
SREK1-209ENST00000520953 RHPN2Q8IUC4 686 aa16.57■□□□□ 0.24
SREK1-209ENST00000520953 SPC24Q8NBT2 197 aa16.57■□□□□ 0.24
SREK1-209ENST00000520953 SUCLA2Q9P2R7 463 aaPredicted RBP16.57■□□□□ 0.24
SREK1-209ENST00000520953 GRIN2DO15399 1336 aa16.57■□□□□ 0.24
SREK1-209ENST00000520953 LRRIQ4A6NIV6 560 aa16.57■□□□□ 0.24
SREK1-209ENST00000520953 TREHO43280 583 aa16.57■□□□□ 0.24
SREK1-209ENST00000520953 VTNP04004 478 aa16.57■□□□□ 0.24
SREK1-209ENST00000520953 SRGAP2CP0DJJ0 459 aa16.57■□□□□ 0.24
SREK1-209ENST00000520953 ZNF18P17022 549 aa16.57■□□□□ 0.24
SREK1-209ENST00000520953 ZNF75DP51815 510 aa16.57■□□□□ 0.24
SREK1-209ENST00000520953 LAMTOR4Q0VGL1 99 aa16.57■□□□□ 0.24
SREK1-209ENST00000520953 PTPN21Q16825 1174 aa16.57■□□□□ 0.24
SREK1-209ENST00000520953 KNOP1Q1ED39 458 aaKnown RBP16.57■□□□□ 0.24
SREK1-209ENST00000520953 NBPF20Q3BBV1 942 aa16.57■□□□□ 0.24
SREK1-209ENST00000520953 MTG1Q9BT17 334 aaPredicted RBP16.57■□□□□ 0.24
SREK1-209ENST00000520953 DENND3A2RUS2 1198 aa16.56■□□□□ 0.24
SREK1-209ENST00000520953 SMTNL1A8MU46 457 aa16.56■□□□□ 0.24
SREK1-209ENST00000520953 CLIC2O15247 247 aa16.56■□□□□ 0.24
SREK1-209ENST00000520953 MAPTP10636 758 aaKnown RBP16.56■□□□□ 0.24
SREK1-209ENST00000520953 TMEM62Q0P6H9 643 aa16.56■□□□□ 0.24
SREK1-209ENST00000520953 SRRTQ9BXP5 876 aaKnown RBP16.56■□□□□ 0.24
SREK1-209ENST00000520953 COL1A2P08123 1366 aa16.56■□□□□ 0.24
SREK1-209ENST00000520953 CSDE1O75534 798 aaKnown RBP16.55■□□□□ 0.24
SREK1-209ENST00000520953 OFD1O75665 1012 aa16.55■□□□□ 0.24
SREK1-209ENST00000520953 RTP1P59025 263 aa16.55■□□□□ 0.24
SREK1-209ENST00000520953 GTF2BQ00403 316 aa16.55■□□□□ 0.24
SREK1-209ENST00000520953 CT47A1Q5JQC4 288 aaPredicted RBP16.55■□□□□ 0.24
SREK1-209ENST00000520953 IER5Q5VY09 327 aa16.55■□□□□ 0.24
SREK1-209ENST00000520953 NFRKBQ6P4R8 1299 aa16.55■□□□□ 0.24
SREK1-209ENST00000520953 CSGALNACT2Q8N6G5 542 aa16.55■□□□□ 0.24
SREK1-209ENST00000520953 SPIRE2Q8WWL2 714 aa16.55■□□□□ 0.24
SREK1-209ENST00000520953 IFT74Q96LB3 600 aa16.55■□□□□ 0.24
SREK1-209ENST00000520953 NLRP4Q96MN2 994 aa16.55■□□□□ 0.24
SREK1-209ENST00000520953 NTPCRQ9BSD7 190 aaKnown RBP16.55■□□□□ 0.24
SREK1-209ENST00000520953 TRIM5Q9C035 493 aa16.55■□□□□ 0.24
SREK1-209ENST00000520953 FAM49AQ9H0Q0 323 aaPredicted RBP16.55■□□□□ 0.24
SREK1-209ENST00000520953 TTLL13PA6NNM8 815 aa16.55■□□□□ 0.24
SREK1-209ENST00000520953 EIF3DO15371 548 aaKnown RBP eCLIP16.55■□□□□ 0.24
SREK1-209ENST00000520953 ADAM17P78536 824 aa16.55■□□□□ 0.24
SREK1-209ENST00000520953 CDKAL1Q5VV42 579 aa16.55■□□□□ 0.24
SREK1-209ENST00000520953 LRRC55Q6ZSA7 311 aa16.55■□□□□ 0.24
SREK1-209ENST00000520953 KIAA0319LQ8IZA0 1049 aa16.55■□□□□ 0.24
SREK1-209ENST00000520953 RNF149Q8NC42 400 aa16.55■□□□□ 0.24
SREK1-209ENST00000520953 PSPC1Q8WXF1 523 aaKnown RBP16.55■□□□□ 0.24
SREK1-209ENST00000520953 DEFB118Q96PH6 123 aa16.55■□□□□ 0.24
SREK1-209ENST00000520953 ARHGAP28Q9P2N2 729 aa16.55■□□□□ 0.24
SREK1-209ENST00000520953 PPME1Q9Y570 386 aa16.55■□□□□ 0.24
SREK1-209ENST00000520953 NRCAMQ92823 1304 aa16.54■□□□□ 0.24
SREK1-209ENST00000520953 CCL5P13501 91 aa16.54■□□□□ 0.24
SREK1-209ENST00000520953 CST5P28325 142 aaPredicted RBP16.54■□□□□ 0.24
SREK1-209ENST00000520953 TPD52L1Q16890 204 aaPredicted RBP16.54■□□□□ 0.24
SREK1-209ENST00000520953 CREBRFQ8IUR6 639 aa16.54■□□□□ 0.24
SREK1-209ENST00000520953 C7orf31Q8N865 590 aa16.54■□□□□ 0.24
SREK1-209ENST00000520953 ZSWIM2Q8NEG5 633 aa16.54■□□□□ 0.24
SREK1-209ENST00000520953 KCNF1Q9H3M0 494 aa16.54■□□□□ 0.24
SREK1-209ENST00000520953 TBX20Q9UMR3 447 aa16.54■□□□□ 0.24
SREK1-209ENST00000520953 AKT3Q9Y243 479 aa16.54■□□□□ 0.24
SREK1-209ENST00000520953 PCDHB13Q9Y5F0 798 aa16.54■□□□□ 0.24
SREK1-209ENST00000520953 ANKRD63C9JTQ0 380 aa16.54■□□□□ 0.24
SREK1-209ENST00000520953 NAMPTP43490 491 aa16.54■□□□□ 0.24
SREK1-209ENST00000520953 ACLYP53396 1101 aa16.54■□□□□ 0.24
SREK1-209ENST00000520953 SMTNP53814 917 aa16.54■□□□□ 0.24
SREK1-209ENST00000520953 FAM47CQ5HY64 1035 aa16.54■□□□□ 0.24
SREK1-209ENST00000520953 GDF6Q6KF10 455 aaPredicted RBP16.54■□□□□ 0.24
SREK1-209ENST00000520953 SARM1Q6SZW1 724 aa16.54■□□□□ 0.24
SREK1-209ENST00000520953 CTU1Q7Z7A3 348 aaKnown RBP16.54■□□□□ 0.24
SREK1-209ENST00000520953 RNF180Q86T96 592 aa16.54■□□□□ 0.24
SREK1-209ENST00000520953 WNT8BQ93098 351 aa16.54■□□□□ 0.24
SREK1-209ENST00000520953 GTPBP4Q9BZE4 634 aaKnown RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms