RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 FAM86C2PA6NEL3 165 aa20.21■□□□□ 0.83
VEGFA-222ENST00000520948 CUTAO60888 179 aa20.21■□□□□ 0.83
VEGFA-222ENST00000520948 CAND2O75155 1236 aa20.21■□□□□ 0.83
VEGFA-222ENST00000520948 RARRES1P49788 294 aa20.21■□□□□ 0.83
VEGFA-222ENST00000520948 EPC2Q52LR7 807 aa20.21■□□□□ 0.83
VEGFA-222ENST00000520948 XKR9Q5GH70 373 aa20.21■□□□□ 0.83
VEGFA-222ENST00000520948 FAM26DQ5JW98 314 aa20.21■□□□□ 0.83
VEGFA-222ENST00000520948 SPECC1Q5M775 1068 aa20.21■□□□□ 0.83
VEGFA-222ENST00000520948 CABP7Q86V35 215 aa20.21■□□□□ 0.83
VEGFA-222ENST00000520948 KIAA0319LQ8IZA0 1049 aa20.21■□□□□ 0.83
VEGFA-222ENST00000520948 LEO1Q8WVC0 666 aaPredicted RBP20.21■□□□□ 0.83
VEGFA-222ENST00000520948 EPSTI1Q96J88 318 aa20.21■□□□□ 0.83
VEGFA-222ENST00000520948 CEP170P1Q96L14 293 aa20.21■□□□□ 0.83
VEGFA-222ENST00000520948 DDX19AQ9NUU7 478 aaKnown RBP20.21■□□□□ 0.83
VEGFA-222ENST00000520948 PCDHA7Q9UN72 937 aa20.21■□□□□ 0.83
VEGFA-222ENST00000520948 RALGAPA2Q2PPJ7 1873 aa20.2■□□□□ 0.82
VEGFA-222ENST00000520948 UBA7P41226 1012 aa20.2■□□□□ 0.82
VEGFA-222ENST00000520948 TBC1D8BQ0IIM8 1120 aa20.2■□□□□ 0.82
VEGFA-222ENST00000520948 TMEM119Q4V9L6 283 aa20.2■□□□□ 0.82
VEGFA-222ENST00000520948 TMEM31Q5JXX7 168 aa20.2■□□□□ 0.82
VEGFA-222ENST00000520948 EFCAB12Q6NXP0 572 aa20.2■□□□□ 0.82
VEGFA-222ENST00000520948 KCNK18Q7Z418 384 aa20.2■□□□□ 0.82
VEGFA-222ENST00000520948 NME8Q8N427 588 aa20.2■□□□□ 0.82
VEGFA-222ENST00000520948 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.2■□□□□ 0.82
VEGFA-222ENST00000520948 DNAJB3Q8WWF6 145 aa20.2■□□□□ 0.82
VEGFA-222ENST00000520948 TOP1MTQ969P6 601 aa20.2■□□□□ 0.82
VEGFA-222ENST00000520948 MRPL38Q96DV4 380 aaKnown RBP20.2■□□□□ 0.82
VEGFA-222ENST00000520948 IFIH1Q9BYX4 1025 aaKnown RBP20.2■□□□□ 0.82
VEGFA-222ENST00000520948 NT5C3AQ9H0P0 336 aa20.2■□□□□ 0.82
VEGFA-222ENST00000520948 KDM3AQ9Y4C1 1321 aa20.2■□□□□ 0.82
VEGFA-222ENST00000520948 ATG2AQ2TAZ0 1938 aa20.19■□□□□ 0.82
VEGFA-222ENST00000520948 E9PMD0 336 aa20.19■□□□□ 0.82
VEGFA-222ENST00000520948 RPLP2P05387 115 aaKnown RBP20.19■□□□□ 0.82
VEGFA-222ENST00000520948 IL9P15248 144 aa20.19■□□□□ 0.82
VEGFA-222ENST00000520948 GPM6BQ13491 265 aa20.19■□□□□ 0.82
VEGFA-222ENST00000520948 LEXMQ3ZCV2 418 aa20.19■□□□□ 0.82
VEGFA-222ENST00000520948 EXOC8Q8IYI6 725 aa20.19■□□□□ 0.82
VEGFA-222ENST00000520948 LRRC15Q8TF66 581 aa20.19■□□□□ 0.82
VEGFA-222ENST00000520948 SCAND2PQ9GZW5 306 aaPredicted RBP20.19■□□□□ 0.82
VEGFA-222ENST00000520948 COL4A6Q14031 1691 aa20.19■□□□□ 0.82
VEGFA-222ENST00000520948 EYA4O95677 639 aa20.18■□□□□ 0.82
VEGFA-222ENST00000520948 RFC5P40937 340 aa20.18■□□□□ 0.82
VEGFA-222ENST00000520948 MGAT3Q09327 533 aa20.18■□□□□ 0.82
VEGFA-222ENST00000520948 PTPROQ16827 1216 aa20.18■□□□□ 0.82
VEGFA-222ENST00000520948 SHC4Q6S5L8 630 aa20.18■□□□□ 0.82
VEGFA-222ENST00000520948 SPATA32Q96LK8 384 aa20.18■□□□□ 0.82
VEGFA-222ENST00000520948 SAMD11Q96NU1 681 aa20.18■□□□□ 0.82
VEGFA-222ENST00000520948 C11orf16Q9NQ32 467 aa20.18■□□□□ 0.82
VEGFA-222ENST00000520948 XPNPEP1Q9NQW7 623 aa20.18■□□□□ 0.82
VEGFA-222ENST00000520948 DNM3Q9UQ16 869 aa20.18■□□□□ 0.82
VEGFA-222ENST00000520948 LOXHD1Q8IVV2 1947 aa20.17■□□□□ 0.82
VEGFA-222ENST00000520948 H3BQ06 376 aaPredicted RBP20.17■□□□□ 0.82
VEGFA-222ENST00000520948 DGAT1O75907 488 aa20.17■□□□□ 0.82
VEGFA-222ENST00000520948 CHRNA1P02708 482 aa20.17■□□□□ 0.82
VEGFA-222ENST00000520948 DRP2Q13474 957 aa20.17■□□□□ 0.82
VEGFA-222ENST00000520948 KARSQ15046 597 aaKnown RBP20.17■□□□□ 0.82
VEGFA-222ENST00000520948 PTCRAQ6ISU1 281 aaPredicted RBP20.17■□□□□ 0.82
VEGFA-222ENST00000520948 EP400NLQ6ZTU2 488 aa20.17■□□□□ 0.82
VEGFA-222ENST00000520948 RSPH3Q86UC2 560 aa20.17■□□□□ 0.82
VEGFA-222ENST00000520948 TMEM192Q8IY95 271 aa20.17■□□□□ 0.82
VEGFA-222ENST00000520948 LRRC71Q8N4P6 559 aa20.17■□□□□ 0.82
VEGFA-222ENST00000520948 METTL13Q8N6R0 699 aa20.17■□□□□ 0.82
VEGFA-222ENST00000520948 CALML4Q96GE6 196 aa20.17■□□□□ 0.82
VEGFA-222ENST00000520948 JPH2Q9BR39 696 aaPredicted RBP20.17■□□□□ 0.82
VEGFA-222ENST00000520948 FAM49AQ9H0Q0 323 aaPredicted RBP20.17■□□□□ 0.82
VEGFA-222ENST00000520948 BLOC1S4Q9NUP1 217 aa20.17■□□□□ 0.82
VEGFA-222ENST00000520948 HCN4Q9Y3Q4 1203 aa20.17■□□□□ 0.82
VEGFA-222ENST00000520948 H3BNC9 293 aa20.16■□□□□ 0.82
VEGFA-222ENST00000520948 GHRP10912 638 aa20.16■□□□□ 0.82
VEGFA-222ENST00000520948 NCLP19338 710 aaKnown RBP20.16■□□□□ 0.82
VEGFA-222ENST00000520948 TMOD1P28289 359 aa20.16■□□□□ 0.82
VEGFA-222ENST00000520948 ME1P48163 572 aa20.16■□□□□ 0.82
VEGFA-222ENST00000520948 CLCN3P51790 818 aa20.16■□□□□ 0.82
VEGFA-222ENST00000520948 TIGD5Q53EQ6 642 aa20.16■□□□□ 0.82
VEGFA-222ENST00000520948 TCEAL5Q5H9L2 206 aa20.16■□□□□ 0.82
VEGFA-222ENST00000520948 ADALQ6DHV7 355 aa20.16■□□□□ 0.82
VEGFA-222ENST00000520948 FAM178BQ8IXR5 827 aa20.16■□□□□ 0.82
VEGFA-222ENST00000520948 APBB2Q92870 758 aa20.16■□□□□ 0.82
VEGFA-222ENST00000520948 PLIN2Q99541 437 aa20.16■□□□□ 0.82
VEGFA-222ENST00000520948 BHMT2Q9H2M3 363 aa20.16■□□□□ 0.82
VEGFA-222ENST00000520948 A0A087X0B3 334 aa20.15■□□□□ 0.82
VEGFA-222ENST00000520948 GAS2O43903 313 aaKnown RBP20.15■□□□□ 0.82
VEGFA-222ENST00000520948 GPR32O75388 356 aa20.15■□□□□ 0.82
VEGFA-222ENST00000520948 PLCG1P19174 1290 aa20.15■□□□□ 0.82
VEGFA-222ENST00000520948 SSTR3P32745 418 aaPredicted RBP20.15■□□□□ 0.82
VEGFA-222ENST00000520948 POLGP54098 1239 aaPredicted RBP20.15■□□□□ 0.82
VEGFA-222ENST00000520948 MRPS6P82932 125 aaKnown RBP20.15■□□□□ 0.82
VEGFA-222ENST00000520948 EMC2Q15006 297 aa20.15■□□□□ 0.82
VEGFA-222ENST00000520948 PADI6Q6TGC4 694 aa20.15■□□□□ 0.82
VEGFA-222ENST00000520948 GJD3Q8N144 294 aa20.15■□□□□ 0.82
VEGFA-222ENST00000520948 SYT2Q8N9I0 419 aaPredicted RBP20.15■□□□□ 0.82
VEGFA-222ENST00000520948 SLC7A3Q8WY07 619 aa20.15■□□□□ 0.82
VEGFA-222ENST00000520948 ARHGEF35A5YM69 484 aa20.14■□□□□ 0.81
VEGFA-222ENST00000520948 PI4K2BG5E9Z4 385 aa20.14■□□□□ 0.81
VEGFA-222ENST00000520948 CYP11B2P19099 503 aa20.14■□□□□ 0.81
VEGFA-222ENST00000520948 CTNNB1P35222 781 aa20.14■□□□□ 0.81
VEGFA-222ENST00000520948 DNM2P50570 870 aa20.14■□□□□ 0.81
VEGFA-222ENST00000520948 SLC12A3P55017 1021 aa20.14■□□□□ 0.81
VEGFA-222ENST00000520948 ZRSR1Q15695 479 aaKnown RBP20.14■□□□□ 0.81
VEGFA-222ENST00000520948 NAALADL2Q58DX5 795 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms