RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, human

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDCBP-208	ENST00000520228	PROSER1	Q86XN7	944 aa		9.11	□□□□□ -0.95
SDCBP-208	ENST00000520228	NGRN	Q9NPE2	291 aa	Known RBP	9.11	□□□□□ -0.95
SDCBP-208	ENST00000520228	KCNH7	Q9NS40	1196 aa		9.11	□□□□□ -0.95
SDCBP-208	ENST00000520228	WASF3	Q9UPY6	502 aa		9.11	□□□□□ -0.95
SDCBP-208	ENST00000520228	BLM	P54132	1417 aa	Predicted RBP	9.11	□□□□□ -0.95
SDCBP-208	ENST00000520228	LMO7	Q8WWI1	1683 aa		9.1	□□□□□ -0.95
SDCBP-208	ENST00000520228	EYA4	O95677	639 aa		9.1	□□□□□ -0.95
SDCBP-208	ENST00000520228	SCNN1B	P51168	640 aa		9.1	□□□□□ -0.95
SDCBP-208	ENST00000520228	DDB1	Q16531	1140 aa		9.1	□□□□□ -0.95
SDCBP-208	ENST00000520228	HSP90AB2P	Q58FF8	381 aa		9.1	□□□□□ -0.95
SDCBP-208	ENST00000520228	EP400NL	Q6ZTU2	488 aa		9.1	□□□□□ -0.95
SDCBP-208	ENST00000520228	OR2W6P	Q8NHA6	318 aa		9.1	□□□□□ -0.95
SDCBP-208	ENST00000520228	RIC8B	Q9NVN3	520 aa		9.1	□□□□□ -0.95
SDCBP-208	ENST00000520228	POLK	Q9UBT6	870 aa		9.1	□□□□□ -0.95
SDCBP-208	ENST00000520228	ZKSCAN5	Q9Y2L8	839 aa		9.1	□□□□□ -0.95
SDCBP-208	ENST00000520228	NRAP	Q86VF7	1730 aa		9.1	□□□□□ -0.95
SDCBP-208	ENST00000520228	RTL1	A6NKG5	1358 aa		9.1	□□□□□ -0.95
SDCBP-208	ENST00000520228	NSD2	O96028	1365 aa		9.1	□□□□□ -0.95
SDCBP-208	ENST00000520228	ABCC6	O95255	1503 aa		9.1	□□□□□ -0.95
SDCBP-208	ENST00000520228	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	9.09	□□□□□ -0.95
SDCBP-208	ENST00000520228	EXOC5	O00471	708 aa		9.09	□□□□□ -0.95
SDCBP-208	ENST00000520228	GAS7	O60861	476 aa		9.09	□□□□□ -0.95
SDCBP-208	ENST00000520228	SDHA	P31040	664 aa		9.09	□□□□□ -0.95
SDCBP-208	ENST00000520228	AMPD3	Q01432	767 aa		9.09	□□□□□ -0.95
SDCBP-208	ENST00000520228	TMEFF1	Q8IYR6	380 aa		9.09	□□□□□ -0.95
SDCBP-208	ENST00000520228	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	9.09	□□□□□ -0.95
SDCBP-208	ENST00000520228	SMARCC2	Q8TAQ2	1214 aa		9.09	□□□□□ -0.95
SDCBP-208	ENST00000520228	GPATCH3	Q96I76	525 aa		9.09	□□□□□ -0.95
SDCBP-208	ENST00000520228	YIPF4	Q9BSR8	244 aa		9.09	□□□□□ -0.95
SDCBP-208	ENST00000520228	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	9.09	□□□□□ -0.95
SDCBP-208	ENST00000520228	OXSM	Q9NWU1	459 aa		9.09	□□□□□ -0.95
SDCBP-208	ENST00000520228	FLT4	P35916	1363 aa		9.09	□□□□□ -0.95
SDCBP-208	ENST00000520228	KIF24	Q5T7B8	1368 aa		9.09	□□□□□ -0.95
SDCBP-208	ENST00000520228	MYOM1	P52179	1685 aa		9.08	□□□□□ -0.96
SDCBP-208	ENST00000520228	IL2RB	P14784	551 aa		9.08	□□□□□ -0.96
SDCBP-208	ENST00000520228	ADCYAP1R1	P41586	468 aa		9.08	□□□□□ -0.96
SDCBP-208	ENST00000520228	NKX3-2	P78367	333 aa		9.08	□□□□□ -0.96
SDCBP-208	ENST00000520228	CC2D1A	Q6P1N0	951 aa	Predicted RBP	9.08	□□□□□ -0.96
SDCBP-208	ENST00000520228	CD300LD	Q6UXZ3	194 aa		9.08	□□□□□ -0.96
SDCBP-208	ENST00000520228	ZC3H18	Q86VM9	953 aa	Known RBP	9.08	□□□□□ -0.96
SDCBP-208	ENST00000520228	CHTF18	Q8WVB6	975 aa		9.08	□□□□□ -0.96
SDCBP-208	ENST00000520228	BRINP2	Q9C0B6	783 aa		9.08	□□□□□ -0.96
SDCBP-208	ENST00000520228	INSR	P06213	1382 aa		9.08	□□□□□ -0.96
SDCBP-208	ENST00000520228	USP54	Q70EL1	1684 aa		9.07	□□□□□ -0.96
SDCBP-208	ENST00000520228	SMG6	Q86US8	1419 aa	Known RBP	9.07	□□□□□ -0.96
SDCBP-208	ENST00000520228	KRT37	O76014	449 aa		9.07	□□□□□ -0.96
SDCBP-208	ENST00000520228	TMEM253	P0C7T8	217 aa		9.07	□□□□□ -0.96
SDCBP-208	ENST00000520228	CNGA1	P29973	690 aa		9.07	□□□□□ -0.96
SDCBP-208	ENST00000520228	THBS2	P35442	1172 aa		9.07	□□□□□ -0.96
SDCBP-208	ENST00000520228	HERVK_113	P62684	666 aa		9.07	□□□□□ -0.96
SDCBP-208	ENST00000520228	FOXO4	P98177	505 aa		9.07	□□□□□ -0.96
SDCBP-208	ENST00000520228	DBP	Q10586	325 aa	Predicted RBP	9.07	□□□□□ -0.96
SDCBP-208	ENST00000520228	CNGB1	Q14028	1251 aa	Predicted RBP	9.07	□□□□□ -0.96
SDCBP-208	ENST00000520228	CC2D1B	Q5T0F9	858 aa	Known RBP	9.07	□□□□□ -0.96
SDCBP-208	ENST00000520228	ZNF648	Q5T619	568 aa	Predicted RBP	9.07	□□□□□ -0.96
SDCBP-208	ENST00000520228	SIGLEC10	Q96LC7	697 aa		9.07	□□□□□ -0.96
SDCBP-208	ENST00000520228	SYT3	Q9BQG1	590 aa		9.07	□□□□□ -0.96
SDCBP-208	ENST00000520228	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	9.07	□□□□□ -0.96
SDCBP-208	ENST00000520228	THG1L	Q9NWX6	298 aa	Known RBP	9.07	□□□□□ -0.96
SDCBP-208	ENST00000520228	H2AFY2	Q9P0M6	372 aa	Predicted RBP	9.07	□□□□□ -0.96
SDCBP-208	ENST00000520228	COL18A1	P39060	1754 aa		9.07	□□□□□ -0.96
SDCBP-208	ENST00000520228	RASSF10	A6NK89	507 aa		9.06	□□□□□ -0.96
SDCBP-208	ENST00000520228		H7C1D1	291 aa		9.06	□□□□□ -0.96
SDCBP-208	ENST00000520228	HIP1R	O75146	1068 aa		9.06	□□□□□ -0.96
SDCBP-208	ENST00000520228	CYP2C8	P10632	490 aa		9.06	□□□□□ -0.96
SDCBP-208	ENST00000520228	LSS	P48449	732 aa		9.06	□□□□□ -0.96
SDCBP-208	ENST00000520228	NFKB2	Q00653	900 aa		9.06	□□□□□ -0.96
SDCBP-208	ENST00000520228	STRN3	Q13033	797 aa		9.06	□□□□□ -0.96
SDCBP-208	ENST00000520228	PTPRO	Q16827	1216 aa		9.06	□□□□□ -0.96
SDCBP-208	ENST00000520228	CT47A1	Q5JQC4	288 aa	Predicted RBP	9.06	□□□□□ -0.96
SDCBP-208	ENST00000520228	CATSPERE	Q5SY80	951 aa		9.06	□□□□□ -0.96
SDCBP-208	ENST00000520228	CD276	Q5ZPR3	534 aa		9.06	□□□□□ -0.96
SDCBP-208	ENST00000520228	EFHB	Q8N7U6	833 aa		9.06	□□□□□ -0.96
SDCBP-208	ENST00000520228	KIAA1958	Q8N8K9	716 aa		9.06	□□□□□ -0.96
SDCBP-208	ENST00000520228	MARCH10	Q8NA82	808 aa	Predicted RBP	9.06	□□□□□ -0.96
SDCBP-208	ENST00000520228	DDX11	Q96FC9	970 aa		9.06	□□□□□ -0.96
SDCBP-208	ENST00000520228	PPP1R16B	Q96T49	567 aa		9.06	□□□□□ -0.96
SDCBP-208	ENST00000520228	PCDH18	Q9HCL0	1135 aa		9.06	□□□□□ -0.96
SDCBP-208	ENST00000520228	CD320	Q9NPF0	282 aa		9.06	□□□□□ -0.96
SDCBP-208	ENST00000520228	PCDH12	Q9NPG4	1184 aa		9.06	□□□□□ -0.96
SDCBP-208	ENST00000520228	RBPJL	Q9UBG7	517 aa		9.06	□□□□□ -0.96
SDCBP-208	ENST00000520228	SPO11	Q9Y5K1	396 aa		9.06	□□□□□ -0.96
SDCBP-208	ENST00000520228	COL4A3BP	Q9Y5P4	624 aa		9.06	□□□□□ -0.96
SDCBP-208	ENST00000520228	DISP2	A7MBM2	1401 aa		9.05	□□□□□ -0.96
SDCBP-208	ENST00000520228	NEMP1	O14524	444 aa		9.05	□□□□□ -0.96
SDCBP-208	ENST00000520228	TGM5	O43548	720 aa		9.05	□□□□□ -0.96
SDCBP-208	ENST00000520228	ZEB2	O60315	1214 aa		9.05	□□□□□ -0.96
SDCBP-208	ENST00000520228	FKBP9	O95302	570 aa		9.05	□□□□□ -0.96
SDCBP-208	ENST00000520228	TSPAN15	O95858	294 aa		9.05	□□□□□ -0.96
SDCBP-208	ENST00000520228	C1QTNF9	P0C862	333 aa		9.05	□□□□□ -0.96
SDCBP-208	ENST00000520228	KIF11	P52732	1056 aa		9.05	□□□□□ -0.96
SDCBP-208	ENST00000520228	HTRA3	P83110	453 aa		9.05	□□□□□ -0.96
SDCBP-208	ENST00000520228	LIPI	Q6XZB0	460 aa		9.05	□□□□□ -0.96
SDCBP-208	ENST00000520228	ATG14	Q6ZNE5	492 aa		9.05	□□□□□ -0.96
SDCBP-208	ENST00000520228	FKBP9P1	Q75LS8	142 aa		9.05	□□□□□ -0.96
SDCBP-208	ENST00000520228	LINC00482	Q8N8I6	264 aa		9.05	□□□□□ -0.96
SDCBP-208	ENST00000520228	RAPGEF4	Q8WZA2	1011 aa		9.05	□□□□□ -0.96
SDCBP-208	ENST00000520228	NOX5	Q96PH1	765 aa		9.05	□□□□□ -0.96
SDCBP-208	ENST00000520228	ELF4	Q99607	663 aa	Predicted RBP	9.05	□□□□□ -0.96
SDCBP-208	ENST00000520228	GORASP1	Q9BQQ3	440 aa		9.05	□□□□□ -0.96

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