RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 PSPC1Q8WXF1 523 aaKnown RBP14.83□□□□□ -0.04
VEGFA-219ENST00000518824 JPH2Q9BR39 696 aaPredicted RBP14.83□□□□□ -0.04
VEGFA-219ENST00000518824 LRWD1Q9UFC0 647 aa14.83□□□□□ -0.04
VEGFA-219ENST00000518824 PRUNE2Q8WUY3 3088 aa14.83□□□□□ -0.04
VEGFA-219ENST00000518824 MEIS3P2A8K0S8 358 aa14.82□□□□□ -0.04
VEGFA-219ENST00000518824 POU3F3P20264 500 aaPredicted RBP14.82□□□□□ -0.04
VEGFA-219ENST00000518824 GLRA2P23416 452 aa14.82□□□□□ -0.04
VEGFA-219ENST00000518824 RESTQ13127 1097 aa14.82□□□□□ -0.04
VEGFA-219ENST00000518824 CAPSQ13938 189 aa14.82□□□□□ -0.04
VEGFA-219ENST00000518824 LONRF3Q496Y0 759 aa14.82□□□□□ -0.04
VEGFA-219ENST00000518824 ECHDC2Q86YB7 292 aa14.82□□□□□ -0.04
VEGFA-219ENST00000518824 RNF149Q8NC42 400 aa14.82□□□□□ -0.04
VEGFA-219ENST00000518824 SNX29Q8TEQ0 813 aa14.82□□□□□ -0.04
VEGFA-219ENST00000518824 BSNDQ8WZ55 320 aa14.82□□□□□ -0.04
VEGFA-219ENST00000518824 SNX21Q969T3 373 aa14.82□□□□□ -0.04
VEGFA-219ENST00000518824 POLR3FQ9H1D9 316 aaPredicted RBP14.82□□□□□ -0.04
VEGFA-219ENST00000518824 ATP6V0A4Q9HBG4 840 aa14.82□□□□□ -0.04
VEGFA-219ENST00000518824 C1orf112Q9NSG2 853 aa14.82□□□□□ -0.04
VEGFA-219ENST00000518824 LRFN2Q9ULH4 789 aa14.82□□□□□ -0.04
VEGFA-219ENST00000518824 KIAA1024Q9UPX6 916 aa14.82□□□□□ -0.04
VEGFA-219ENST00000518824 PPME1Q9Y570 386 aa14.82□□□□□ -0.04
VEGFA-219ENST00000518824 PCDHB7Q9Y5E2 793 aa14.82□□□□□ -0.04
VEGFA-219ENST00000518824 TBKBP1A7MCY6 615 aa14.81□□□□□ -0.04
VEGFA-219ENST00000518824 E9PMD0 336 aa14.81□□□□□ -0.04
VEGFA-219ENST00000518824 DGAT1O75907 488 aa14.81□□□□□ -0.04
VEGFA-219ENST00000518824 CSPG5O95196 566 aa14.81□□□□□ -0.04
VEGFA-219ENST00000518824 STAG3L1P0CL83 205 aa14.81□□□□□ -0.04
VEGFA-219ENST00000518824 XRCC6P12956 609 aaKnown RBP eCLIP14.81□□□□□ -0.043e-10■□□□□ 9
VEGFA-219ENST00000518824 CTNNB1P35222 781 aa14.81□□□□□ -0.04
VEGFA-219ENST00000518824 ODR4Q5SWX8 454 aa14.81□□□□□ -0.04
VEGFA-219ENST00000518824 LRRC55Q6ZSA7 311 aa14.81□□□□□ -0.04
VEGFA-219ENST00000518824 CATSPER4Q7RTX7 472 aa14.81□□□□□ -0.04
VEGFA-219ENST00000518824 ZNF598Q86UK7 904 aaKnown RBP14.81□□□□□ -0.04
VEGFA-219ENST00000518824 CMTR2Q8IYT2 770 aaKnown RBP14.81□□□□□ -0.04
VEGFA-219ENST00000518824 RNF169Q8NCN4 708 aa14.81□□□□□ -0.04
VEGFA-219ENST00000518824 ERMNQ8TAM6 284 aa14.81□□□□□ -0.04
VEGFA-219ENST00000518824 LRRC15Q8TF66 581 aa14.81□□□□□ -0.04
VEGFA-219ENST00000518824 CLP1Q92989 425 aaKnown RBP14.81□□□□□ -0.04
VEGFA-219ENST00000518824 LPPQ93052 612 aa14.81□□□□□ -0.04
VEGFA-219ENST00000518824 INTS4Q96HW7 963 aaKnown RBP14.81□□□□□ -0.04
VEGFA-219ENST00000518824 NACC1Q96RE7 527 aa14.81□□□□□ -0.04
VEGFA-219ENST00000518824 DDX19AQ9NUU7 478 aaKnown RBP14.81□□□□□ -0.04
VEGFA-219ENST00000518824 DBR1Q9UK59 544 aaKnown RBP14.81□□□□□ -0.04
VEGFA-219ENST00000518824 MTMR6Q9Y217 621 aa14.81□□□□□ -0.04
VEGFA-219ENST00000518824 PIN4Q9Y237 131 aaKnown RBP14.81□□□□□ -0.04
VEGFA-219ENST00000518824 PLXNA4Q9HCM2 1894 aa14.8□□□□□ -0.04
VEGFA-219ENST00000518824 MYO7AQ13402 2215 aa14.8□□□□□ -0.04
VEGFA-219ENST00000518824 VWA3AA6NCI4 1184 aa14.8□□□□□ -0.04
VEGFA-219ENST00000518824 GRM6O15303 877 aa14.8□□□□□ -0.04
VEGFA-219ENST00000518824 ZSCAN20P17040 1043 aaPredicted RBP14.8□□□□□ -0.04
VEGFA-219ENST00000518824 HOXA11P31270 313 aaPredicted RBP14.8□□□□□ -0.04
VEGFA-219ENST00000518824 BMPR1AP36894 532 aa14.8□□□□□ -0.04
VEGFA-219ENST00000518824 PRPHP41219 470 aa14.8□□□□□ -0.04
VEGFA-219ENST00000518824 PTENP60484 403 aa14.8□□□□□ -0.04
VEGFA-219ENST00000518824 GPM6BQ13491 265 aa14.8□□□□□ -0.04
VEGFA-219ENST00000518824 PDIA5Q14554 519 aa14.8□□□□□ -0.04
VEGFA-219ENST00000518824 CLLU1OSQ5K130 101 aa14.8□□□□□ -0.04
VEGFA-219ENST00000518824 PADI6Q6TGC4 694 aa14.8□□□□□ -0.04
VEGFA-219ENST00000518824 DTHD1Q6ZMT9 781 aa14.8□□□□□ -0.04
VEGFA-219ENST00000518824 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.8□□□□□ -0.043e-13■■□□□ 13.7
VEGFA-219ENST00000518824 ZNF710Q8N1W2 664 aa14.8□□□□□ -0.04
VEGFA-219ENST00000518824 TCP11Q8WWU5 503 aa14.8□□□□□ -0.04
VEGFA-219ENST00000518824 CASD1Q96PB1 797 aa14.8□□□□□ -0.04
VEGFA-219ENST00000518824 PNMA5Q96PV4 448 aa14.8□□□□□ -0.04
VEGFA-219ENST00000518824 PLIN2Q99541 437 aa14.8□□□□□ -0.04
VEGFA-219ENST00000518824 BHMT2Q9H2M3 363 aa14.8□□□□□ -0.04
VEGFA-219ENST00000518824 TMEM161AQ9NX61 479 aa14.8□□□□□ -0.04
VEGFA-219ENST00000518824 USP20Q9Y2K6 914 aa14.8□□□□□ -0.04
VEGFA-219ENST00000518824 CLIC4Q9Y696 253 aa14.8□□□□□ -0.04
VEGFA-219ENST00000518824 A0A0U1RQF3 1178 aa14.79□□□□□ -0.04
VEGFA-219ENST00000518824 H3BNC9 293 aa14.79□□□□□ -0.04
VEGFA-219ENST00000518824 LAD1O00515 517 aa14.79□□□□□ -0.04
VEGFA-219ENST00000518824 GAS2O43903 313 aaKnown RBP14.79□□□□□ -0.04
VEGFA-219ENST00000518824 SFPQP23246 707 aaKnown RBP eCLIP14.79□□□□□ -0.04
VEGFA-219ENST00000518824 DNAJB1P25685 340 aa14.79□□□□□ -0.04
VEGFA-219ENST00000518824 CDC42EP1Q00587 391 aa14.79□□□□□ -0.04
VEGFA-219ENST00000518824 MBTD1Q05BQ5 628 aa14.79□□□□□ -0.04
VEGFA-219ENST00000518824 SF3A1Q15459 793 aaKnown RBP14.79□□□□□ -0.04
VEGFA-219ENST00000518824 ZRSR1Q15695 479 aaKnown RBP14.79□□□□□ -0.04
VEGFA-219ENST00000518824 AMHR2Q16671 573 aa14.79□□□□□ -0.04
VEGFA-219ENST00000518824 UBXN11Q5T124 520 aa14.79□□□□□ -0.04
VEGFA-219ENST00000518824 SRGAP1Q7Z6B7 1085 aa14.79□□□□□ -0.04
VEGFA-219ENST00000518824 SPRYD3Q8NCJ5 442 aa14.79□□□□□ -0.04
VEGFA-219ENST00000518824 CPB2Q96IY4 423 aa14.79□□□□□ -0.04
VEGFA-219ENST00000518824 CCDC43Q96MW1 224 aaKnown RBP14.79□□□□□ -0.04
VEGFA-219ENST00000518824 CWH43Q9H720 699 aa14.79□□□□□ -0.04
VEGFA-219ENST00000518824 ELAC1Q9H777 363 aaKnown RBP14.79□□□□□ -0.04
VEGFA-219ENST00000518824 ALG13Q9NP73 1137 aaKnown RBP14.79□□□□□ -0.04
VEGFA-219ENST00000518824 AGPAT5Q9NUQ2 364 aa14.79□□□□□ -0.04
VEGFA-219ENST00000518824 ARHGEF35A5YM69 484 aa14.78□□□□□ -0.04
VEGFA-219ENST00000518824 TTLL13PA6NNM8 815 aa14.78□□□□□ -0.04
VEGFA-219ENST00000518824 C5orf67F2Z3F1 127 aa14.78□□□□□ -0.04
VEGFA-219ENST00000518824 ASAP2O43150 1006 aa14.78□□□□□ -0.04
VEGFA-219ENST00000518824 B4GALT5O43286 388 aa14.78□□□□□ -0.04
VEGFA-219ENST00000518824 GTPBP6O43824 516 aaPredicted RBP14.78□□□□□ -0.04
VEGFA-219ENST00000518824 EDN1P05305 212 aa14.78□□□□□ -0.04
VEGFA-219ENST00000518824 CYP11B2P19099 503 aa14.78□□□□□ -0.04
VEGFA-219ENST00000518824 PHKA2P46019 1235 aa14.78□□□□□ -0.04
VEGFA-219ENST00000518824 CAMK1Q14012 370 aa14.78□□□□□ -0.04
VEGFA-219ENST00000518824 HAUS3Q68CZ6 603 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms