RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 PNMA5Q96PV4 448 aa12.39□□□□□ -0.43
SCARNA20-201ENST00000516768 USP28Q96RU2 1077 aa12.39□□□□□ -0.43
SCARNA20-201ENST00000516768 CDX2Q99626 313 aaPredicted RBP12.39□□□□□ -0.43
SCARNA20-201ENST00000516768 RNF216Q9NWF9 866 aaPredicted RBP12.39□□□□□ -0.43
SCARNA20-201ENST00000516768 TFIP11Q9UBB9 837 aaKnown RBP12.39□□□□□ -0.43
SCARNA20-201ENST00000516768 TTC3P53804 2025 aa12.38□□□□□ -0.43
SCARNA20-201ENST00000516768 ARHGEF15O94989 841 aa12.38□□□□□ -0.43
SCARNA20-201ENST00000516768 STAG3L1P0CL83 205 aa12.38□□□□□ -0.43
SCARNA20-201ENST00000516768 SFPQP23246 707 aaKnown RBP eCLIP12.38□□□□□ -0.43
SCARNA20-201ENST00000516768 GLRA2P23416 452 aa12.38□□□□□ -0.43
SCARNA20-201ENST00000516768 MARCKSP29966 332 aaPredicted RBP12.38□□□□□ -0.43
SCARNA20-201ENST00000516768 UBA7P41226 1012 aa12.38□□□□□ -0.43
SCARNA20-201ENST00000516768 NASPP49321 788 aaPredicted RBP12.38□□□□□ -0.43
SCARNA20-201ENST00000516768 PTENP60484 403 aa12.38□□□□□ -0.43
SCARNA20-201ENST00000516768 GRB10Q13322 594 aa12.38□□□□□ -0.43
SCARNA20-201ENST00000516768 PKP1Q13835 747 aa12.38□□□□□ -0.43
SCARNA20-201ENST00000516768 TFDP1Q14186 410 aa12.38□□□□□ -0.43
SCARNA20-201ENST00000516768 PCBP1Q15365 356 aaKnown RBP eCLIP12.38□□□□□ -0.43
SCARNA20-201ENST00000516768 C1orf186Q6ZWK4 172 aa12.38□□□□□ -0.43
SCARNA20-201ENST00000516768 MAEAQ7L5Y9 396 aa12.38□□□□□ -0.43
SCARNA20-201ENST00000516768 KCNK18Q7Z418 384 aa12.38□□□□□ -0.43
SCARNA20-201ENST00000516768 CABP7Q86V35 215 aa12.38□□□□□ -0.43
SCARNA20-201ENST00000516768 NPAS4Q8IUM7 802 aa12.38□□□□□ -0.43
SCARNA20-201ENST00000516768 LINC00301Q8NCQ3 95 aa12.38□□□□□ -0.43
SCARNA20-201ENST00000516768 ASAP3Q8TDY4 903 aa12.38□□□□□ -0.43
SCARNA20-201ENST00000516768 ZNF396Q96N95 335 aaPredicted RBP12.38□□□□□ -0.43
SCARNA20-201ENST00000516768 YME1L1Q96TA2 773 aa12.38□□□□□ -0.43
SCARNA20-201ENST00000516768 TRAIPQ9BWF2 469 aa12.38□□□□□ -0.43
SCARNA20-201ENST00000516768 NFKBIZQ9BYH8 718 aa12.38□□□□□ -0.43
SCARNA20-201ENST00000516768 CCSER1Q9C0I3 900 aa12.38□□□□□ -0.43
SCARNA20-201ENST00000516768 ELAC1Q9H777 363 aaKnown RBP12.38□□□□□ -0.43
SCARNA20-201ENST00000516768 MINDY3Q9H8M7 445 aa12.38□□□□□ -0.43
SCARNA20-201ENST00000516768 GPRC5CQ9NQ84 441 aa12.38□□□□□ -0.43
SCARNA20-201ENST00000516768 FBXO2Q9UK22 296 aaPredicted RBP12.38□□□□□ -0.43
SCARNA20-201ENST00000516768 PCDHB7Q9Y5E2 793 aa12.38□□□□□ -0.43
SCARNA20-201ENST00000516768 SIP14410 1827 aa12.38□□□□□ -0.43
SCARNA20-201ENST00000516768 LOXHD1Q8IVV2 1947 aa12.37□□□□□ -0.43
SCARNA20-201ENST00000516768 MICAL3Q7RTP6 2002 aa12.37□□□□□ -0.43
SCARNA20-201ENST00000516768 A0A0U1RQF3 1178 aa12.37□□□□□ -0.43
SCARNA20-201ENST00000516768 LINC01553A4QN01 128 aa12.37□□□□□ -0.43
SCARNA20-201ENST00000516768 F13A1P00488 732 aa12.37□□□□□ -0.43
SCARNA20-201ENST00000516768 HOXA11P31270 313 aaPredicted RBP12.37□□□□□ -0.43
SCARNA20-201ENST00000516768 PHKA2P46019 1235 aa12.37□□□□□ -0.43
SCARNA20-201ENST00000516768 ERVK-21P61565 698 aa12.37□□□□□ -0.43
SCARNA20-201ENST00000516768 CAPSQ13938 189 aa12.37□□□□□ -0.43
SCARNA20-201ENST00000516768 BECN1Q14457 450 aa12.37□□□□□ -0.43
SCARNA20-201ENST00000516768 ZRSR1Q15695 479 aaKnown RBP12.37□□□□□ -0.43
SCARNA20-201ENST00000516768 FAM102BQ5T8I3 360 aa12.37□□□□□ -0.43
SCARNA20-201ENST00000516768 FOXD4L5Q5VV16 416 aaPredicted RBP12.37□□□□□ -0.43
SCARNA20-201ENST00000516768 ATL3Q6DD88 541 aa12.37□□□□□ -0.43
SCARNA20-201ENST00000516768 RINT1Q6NUQ1 792 aa12.37□□□□□ -0.43
SCARNA20-201ENST00000516768 CATSPER4Q7RTX7 472 aa12.37□□□□□ -0.43
SCARNA20-201ENST00000516768 SYT2Q8N9I0 419 aaPredicted RBP12.37□□□□□ -0.43
SCARNA20-201ENST00000516768 FOXD4L4Q8WXT5 416 aaPredicted RBP12.37□□□□□ -0.43
SCARNA20-201ENST00000516768 PLIN2Q99541 437 aa12.37□□□□□ -0.43
SCARNA20-201ENST00000516768 CSRNP2Q9H175 543 aa12.37□□□□□ -0.43
SCARNA20-201ENST00000516768 POLR3FQ9H1D9 316 aaPredicted RBP12.37□□□□□ -0.43
SCARNA20-201ENST00000516768 PRDM12Q9H4Q4 367 aa12.37□□□□□ -0.43
SCARNA20-201ENST00000516768 RC3H2Q9HBD1 1191 aaKnown RBP12.37□□□□□ -0.43
SCARNA20-201ENST00000516768 TMEM161AQ9NX61 479 aa12.37□□□□□ -0.43
SCARNA20-201ENST00000516768 DACT1Q9NYF0 836 aa12.37□□□□□ -0.43
SCARNA20-201ENST00000516768 MYO9BQ13459 2157 aa12.36□□□□□ -0.43
SCARNA20-201ENST00000516768 EOMESO95936 686 aa12.36□□□□□ -0.43
SCARNA20-201ENST00000516768 TMEM119Q4V9L6 283 aa12.36□□□□□ -0.43
SCARNA20-201ENST00000516768 SPECC1Q5M775 1068 aa12.36□□□□□ -0.43
SCARNA20-201ENST00000516768 USP49Q70CQ1 688 aa12.36□□□□□ -0.43
SCARNA20-201ENST00000516768 ECHDC2Q86YB7 292 aa12.36□□□□□ -0.43
SCARNA20-201ENST00000516768 KIFAP3Q92845 792 aa12.36□□□□□ -0.43
SCARNA20-201ENST00000516768 CALML4Q96GE6 196 aa12.36□□□□□ -0.43
SCARNA20-201ENST00000516768 EPSTI1Q96J88 318 aa12.36□□□□□ -0.43
SCARNA20-201ENST00000516768 CDK5RAP3Q96JB5 506 aa12.36□□□□□ -0.43
SCARNA20-201ENST00000516768 CLIC6Q96NY7 704 aa12.36□□□□□ -0.43
SCARNA20-201ENST00000516768 TGS1Q96RS0 853 aaKnown RBP12.36□□□□□ -0.43
SCARNA20-201ENST00000516768 POLD4Q9HCU8 107 aa12.36□□□□□ -0.43
SCARNA20-201ENST00000516768 LRFN2Q9ULH4 789 aa12.36□□□□□ -0.43
SCARNA20-201ENST00000516768 STXBP5LQ9Y2K9 1186 aa12.36□□□□□ -0.43
SCARNA20-201ENST00000516768 ZDHHC9Q9Y397 364 aa12.36□□□□□ -0.43
SCARNA20-201ENST00000516768 SPTLC2O15270 562 aa12.35□□□□□ -0.43
SCARNA20-201ENST00000516768 ZNF623O75123 536 aa12.35□□□□□ -0.43
SCARNA20-201ENST00000516768 PPP6R2O75170 966 aa12.35□□□□□ -0.43
SCARNA20-201ENST00000516768 YEATS4O95619 227 aa12.35□□□□□ -0.43
SCARNA20-201ENST00000516768 BRD1O95696 1058 aa12.35□□□□□ -0.43
SCARNA20-201ENST00000516768 AXLP30530 894 aa12.35□□□□□ -0.43
SCARNA20-201ENST00000516768 DDIT3P35638 169 aa12.35□□□□□ -0.43
SCARNA20-201ENST00000516768 SLC12A3P55017 1021 aa12.35□□□□□ -0.43
SCARNA20-201ENST00000516768 NCBP1Q09161 790 aaKnown RBP12.35□□□□□ -0.43
SCARNA20-201ENST00000516768 KARSQ15046 597 aaKnown RBP12.35□□□□□ -0.43
SCARNA20-201ENST00000516768 SPRED2Q7Z698 418 aa12.35□□□□□ -0.43
SCARNA20-201ENST00000516768 ZNF598Q86UK7 904 aaKnown RBP12.35□□□□□ -0.43
SCARNA20-201ENST00000516768 FIBCD1Q8N539 461 aa12.35□□□□□ -0.43
SCARNA20-201ENST00000516768 KRI1Q8N9T8 703 aaKnown RBP12.35□□□□□ -0.43
SCARNA20-201ENST00000516768 MYLIPQ8WY64 445 aa12.35□□□□□ -0.43
SCARNA20-201ENST00000516768 CLP1Q92989 425 aaKnown RBP12.35□□□□□ -0.43
SCARNA20-201ENST00000516768 NTPCRQ9BSD7 190 aaKnown RBP12.35□□□□□ -0.43
SCARNA20-201ENST00000516768 TIPINQ9BVW5 301 aa12.35□□□□□ -0.43
SCARNA20-201ENST00000516768 FZD8Q9H461 694 aa12.35□□□□□ -0.43
SCARNA20-201ENST00000516768 CERS4Q9HA82 394 aa12.35□□□□□ -0.43
SCARNA20-201ENST00000516768 BLOC1S4Q9NUP1 217 aa12.35□□□□□ -0.43
SCARNA20-201ENST00000516768 AGPAT5Q9NUQ2 364 aa12.35□□□□□ -0.43
SCARNA20-201ENST00000516768 KCND2Q9NZV8 630 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms