RNA–Protein interactions for RNA: ENST00000513965.5

COPG1-208, Transcript of coatomer protein complex subunit gamma 1, human

TSL 2

Gene COPG1, Length 730 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPG1-208	ENST00000513965	SLC26A6	Q9BXS9	759 aa		12.82	□□□□□ -0.36
COPG1-208	ENST00000513965	GBP3	Q9H0R5	595 aa		12.82	□□□□□ -0.36
COPG1-208	ENST00000513965	UNC45A	Q9H3U1	944 aa		12.82	□□□□□ -0.36
COPG1-208	ENST00000513965	DACT1	Q9NYF0	836 aa		12.82	□□□□□ -0.36
COPG1-208	ENST00000513965	VPS54	Q9P1Q0	977 aa		12.82	□□□□□ -0.36
COPG1-208	ENST00000513965	SEPT9	Q9UHD8	586 aa	Predicted RBP	12.82	□□□□□ -0.36
COPG1-208	ENST00000513965	INPP5F	Q9Y2H2	1132 aa		12.82	□□□□□ -0.36
COPG1-208	ENST00000513965	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	12.81	□□□□□ -0.36
COPG1-208	ENST00000513965	ESYT2	A0FGR8	921 aa		12.81	□□□□□ -0.36
COPG1-208	ENST00000513965	EDIL3	O43854	480 aa		12.81	□□□□□ -0.36
COPG1-208	ENST00000513965	HMGB1	P09429	215 aa	Known RBP	12.81	□□□□□ -0.36
COPG1-208	ENST00000513965	EPCAM	P16422	314 aa		12.81	□□□□□ -0.36
COPG1-208	ENST00000513965	CIITA	P33076	1130 aa		12.81	□□□□□ -0.36
COPG1-208	ENST00000513965	CCT2	P78371	535 aa	Known RBP	12.81	□□□□□ -0.36
COPG1-208	ENST00000513965	ITIH3	Q06033	890 aa		12.81	□□□□□ -0.36
COPG1-208	ENST00000513965	MTMR3	Q13615	1198 aa		12.81	□□□□□ -0.36
COPG1-208	ENST00000513965	ATAT1	Q5SQI0	421 aa		12.81	□□□□□ -0.36
COPG1-208	ENST00000513965	LRCH2	Q5VUJ6	765 aa		12.81	□□□□□ -0.36
COPG1-208	ENST00000513965	TWF2	Q6IBS0	349 aa	Known RBP	12.81	□□□□□ -0.36
COPG1-208	ENST00000513965	ZNF598	Q86UK7	904 aa	Known RBP	12.81	□□□□□ -0.36
COPG1-208	ENST00000513965	TMEM173	Q86WV6	379 aa	Predicted RBP	12.81	□□□□□ -0.36
COPG1-208	ENST00000513965	FEZF2	Q8TBJ5	459 aa		12.81	□□□□□ -0.36
COPG1-208	ENST00000513965	BICD2	Q8TD16	824 aa		12.81	□□□□□ -0.36
COPG1-208	ENST00000513965	JAKMIP1	Q96N16	626 aa	Known RBP	12.81	□□□□□ -0.36
COPG1-208	ENST00000513965	TEKT3	Q9BXF9	490 aa		12.81	□□□□□ -0.36
COPG1-208	ENST00000513965	GCOM2	Q9BZD3	368 aa	Predicted RBP	12.81	□□□□□ -0.36
COPG1-208	ENST00000513965	DBR1	Q9UK59	544 aa	Known RBP	12.81	□□□□□ -0.36
COPG1-208	ENST00000513965	SORCS3	Q9UPU3	1222 aa		12.81	□□□□□ -0.36
COPG1-208	ENST00000513965	ZDBF2	Q9HCK1	2354 aa		12.8	□□□□□ -0.36
COPG1-208	ENST00000513965		A0A087WZ62	844 aa		12.8	□□□□□ -0.36
COPG1-208	ENST00000513965	SPDYE4	A6NLX3	237 aa		12.8	□□□□□ -0.36
COPG1-208	ENST00000513965	DDX11L8	A8MPP1	907 aa		12.8	□□□□□ -0.36
COPG1-208	ENST00000513965	SSB	P05455	408 aa	Known RBP eCLIP	12.8	□□□□□ -0.36
COPG1-208	ENST00000513965	MTHFR	P42898	656 aa		12.8	□□□□□ -0.36
COPG1-208	ENST00000513965	NLRP5	P59047	1200 aa		12.8	□□□□□ -0.36
COPG1-208	ENST00000513965	RNASEL	Q05823	741 aa	Known RBP	12.8	□□□□□ -0.36
COPG1-208	ENST00000513965	BMP2KL	Q5H9B9	411 aa		12.8	□□□□□ -0.36
COPG1-208	ENST00000513965	TMC5	Q6UXY8	1006 aa		12.8	□□□□□ -0.36
COPG1-208	ENST00000513965	MIER3	Q7Z3K6	550 aa		12.8	□□□□□ -0.36
COPG1-208	ENST00000513965	RHPN2	Q8IUC4	686 aa		12.8	□□□□□ -0.36
COPG1-208	ENST00000513965	KSR1	Q8IVT5	923 aa		12.8	□□□□□ -0.36
COPG1-208	ENST00000513965	UBALD2	Q8IYN6	164 aa		12.8	□□□□□ -0.36
COPG1-208	ENST00000513965	ZNF710	Q8N1W2	664 aa		12.8	□□□□□ -0.36
COPG1-208	ENST00000513965	SLC5A5	Q92911	643 aa		12.8	□□□□□ -0.36
COPG1-208	ENST00000513965	NECTIN4	Q96NY8	510 aa		12.8	□□□□□ -0.36
COPG1-208	ENST00000513965	FDXACB1	Q9BRP7	624 aa	Predicted RBP	12.8	□□□□□ -0.36
COPG1-208	ENST00000513965	MRPL9	Q9BYD2	267 aa	Known RBP	12.8	□□□□□ -0.36
COPG1-208	ENST00000513965	IRF2BPL	Q9H1B7	796 aa		12.8	□□□□□ -0.36
COPG1-208	ENST00000513965	MFSD1	Q9H3U5	465 aa		12.8	□□□□□ -0.36
COPG1-208	ENST00000513965	SUCLA2	Q9P2R7	463 aa	Predicted RBP	12.8	□□□□□ -0.36
COPG1-208	ENST00000513965	MEIS3P2	A8K0S8	358 aa		12.79	□□□□□ -0.36
COPG1-208	ENST00000513965	SFN	P31947	248 aa		12.79	□□□□□ -0.36
COPG1-208	ENST00000513965	PHKA2	P46019	1235 aa		12.79	□□□□□ -0.36
COPG1-208	ENST00000513965	DNM2	P50570	870 aa		12.79	□□□□□ -0.36
COPG1-208	ENST00000513965	USP11	P51784	963 aa		12.79	□□□□□ -0.36
COPG1-208	ENST00000513965	JAK3	P52333	1124 aa		12.79	□□□□□ -0.36
COPG1-208	ENST00000513965	RCAN1	P53805	252 aa		12.79	□□□□□ -0.36
COPG1-208	ENST00000513965	BLOC1S2	Q6QNY1	142 aa		12.79	□□□□□ -0.36
COPG1-208	ENST00000513965	GLB1L	Q6UWU2	654 aa		12.79	□□□□□ -0.36
COPG1-208	ENST00000513965	CABP7	Q86V35	215 aa		12.79	□□□□□ -0.36
COPG1-208	ENST00000513965	TMEM105	Q8N8V8	129 aa		12.79	□□□□□ -0.36
COPG1-208	ENST00000513965	TDRD5	Q8NAT2	981 aa	Known RBP	12.79	□□□□□ -0.36
COPG1-208	ENST00000513965	SNX27	Q96L92	541 aa		12.79	□□□□□ -0.36
COPG1-208	ENST00000513965	NLRP4	Q96MN2	994 aa		12.79	□□□□□ -0.36
COPG1-208	ENST00000513965	RIT2	Q99578	217 aa		12.79	□□□□□ -0.36
COPG1-208	ENST00000513965	NRDE2	Q9H7Z3	1164 aa		12.79	□□□□□ -0.36
COPG1-208	ENST00000513965	NCOA5	Q9HCD5	579 aa	Known RBP	12.79	□□□□□ -0.36
COPG1-208	ENST00000513965	CHST12	Q9NRB3	414 aa		12.79	□□□□□ -0.36
COPG1-208	ENST00000513965	TBC1D13	Q9NVG8	400 aa		12.79	□□□□□ -0.36
COPG1-208	ENST00000513965	PIN4	Q9Y237	131 aa	Known RBP	12.79	□□□□□ -0.36
COPG1-208	ENST00000513965	MYH9	P35579	1960 aa	Known RBP	12.78	□□□□□ -0.36
COPG1-208	ENST00000513965	GALR2	O43603	387 aa	Predicted RBP	12.78	□□□□□ -0.36
COPG1-208	ENST00000513965	CDC45	O75419	566 aa		12.78	□□□□□ -0.36
COPG1-208	ENST00000513965	OFD1	O75665	1012 aa		12.78	□□□□□ -0.36
COPG1-208	ENST00000513965	GALT	P07902	379 aa		12.78	□□□□□ -0.36
COPG1-208	ENST00000513965	MYB	P10242	640 aa		12.78	□□□□□ -0.36
COPG1-208	ENST00000513965	TARBP2	Q15633	366 aa	Known RBP	12.78	□□□□□ -0.36
COPG1-208	ENST00000513965	XKR3	Q5GH77	459 aa		12.78	□□□□□ -0.36
COPG1-208	ENST00000513965	NOMO2	Q5JPE7	1267 aa		12.78	□□□□□ -0.36
COPG1-208	ENST00000513965	CATSPER4	Q7RTX7	472 aa		12.78	□□□□□ -0.36
COPG1-208	ENST00000513965	DDX53	Q86TM3	631 aa	Known RBP	12.78	□□□□□ -0.36
COPG1-208	ENST00000513965	ZNF280B	Q86YH2	543 aa		12.78	□□□□□ -0.36
COPG1-208	ENST00000513965	FLCN	Q8NFG4	579 aa		12.78	□□□□□ -0.36
COPG1-208	ENST00000513965	CCDC148	Q8NFR7	591 aa		12.78	□□□□□ -0.36
COPG1-208	ENST00000513965	TBCK	Q8TEA7	893 aa		12.78	□□□□□ -0.36
COPG1-208	ENST00000513965	BCL7C	Q8WUZ0	217 aa	Predicted RBP	12.78	□□□□□ -0.36
COPG1-208	ENST00000513965	IGSF21	Q96ID5	467 aa		12.78	□□□□□ -0.36
COPG1-208	ENST00000513965	NIFK	Q9BYG3	293 aa	Known RBP	12.78	□□□□□ -0.36
COPG1-208	ENST00000513965	ZBP1	Q9H171	429 aa		12.78	□□□□□ -0.36
COPG1-208	ENST00000513965	FAM105A	Q9NUU6	356 aa		12.78	□□□□□ -0.36
COPG1-208	ENST00000513965	DNAJB4	Q9UDY4	337 aa		12.78	□□□□□ -0.36
COPG1-208	ENST00000513965	USP34	Q70CQ2	3546 aa		12.78	□□□□□ -0.36
COPG1-208	ENST00000513965	PSMD10	O75832	226 aa		12.77	□□□□□ -0.37
COPG1-208	ENST00000513965	STBD1	O95210	358 aa		12.77	□□□□□ -0.37
COPG1-208	ENST00000513965	TDP2	O95551	362 aa		12.77	□□□□□ -0.37
COPG1-208	ENST00000513965	CTSA	P10619	480 aa		12.77	□□□□□ -0.37
COPG1-208	ENST00000513965	SFPQ	P23246	707 aa	Known RBP eCLIP	12.77	□□□□□ -0.37
COPG1-208	ENST00000513965	KLRC2	P26717	231 aa		12.77	□□□□□ -0.37
COPG1-208	ENST00000513965	SLC11A1	P49279	550 aa		12.77	□□□□□ -0.37
COPG1-208	ENST00000513965	CDC42EP1	Q00587	391 aa		12.77	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms