RNA–Protein interactions for RNA: ENST00000513266.5

PTPN20-228, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 818 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-228ENST00000513266 NME8Q8N427 588 aa11.02□□□□□ -0.65
PTPN20-228ENST00000513266 ZNF707Q96C28 371 aaPredicted RBP11.02□□□□□ -0.65
PTPN20-228ENST00000513266 KIF12Q96FN5 646 aa11.02□□□□□ -0.65
PTPN20-228ENST00000513266 BBC3Q96PG8 261 aaPredicted RBP11.02□□□□□ -0.65
PTPN20-228ENST00000513266 AMNQ9BXJ7 453 aa11.02□□□□□ -0.65
PTPN20-228ENST00000513266 SMARCAD1Q9H4L7 1026 aa11.02□□□□□ -0.65
PTPN20-228ENST00000513266 VAT1LQ9HCJ6 419 aa11.02□□□□□ -0.65
PTPN20-228ENST00000513266 FAM217BQ9NTX9 383 aaPredicted RBP11.02□□□□□ -0.65
PTPN20-228ENST00000513266 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.02□□□□□ -0.65
PTPN20-228ENST00000513266 NOTCH4Q99466 2003 aa11.02□□□□□ -0.65
PTPN20-228ENST00000513266 FRMPD4Q14CM0 1322 aa11.02□□□□□ -0.65
PTPN20-228ENST00000513266 SHISA7A6NL88 538 aa11.01□□□□□ -0.65
PTPN20-228ENST00000513266 GPR182O15218 404 aa11.01□□□□□ -0.65
PTPN20-228ENST00000513266 INPPL1O15357 1258 aa11.01□□□□□ -0.65
PTPN20-228ENST00000513266 RAB11FIP3O75154 756 aa11.01□□□□□ -0.65
PTPN20-228ENST00000513266 STAM2O75886 525 aa11.01□□□□□ -0.65
PTPN20-228ENST00000513266 SRSF5Q13243 272 aaKnown RBP11.01□□□□□ -0.65
PTPN20-228ENST00000513266 PLCB4Q15147 1175 aa11.01□□□□□ -0.65
PTPN20-228ENST00000513266 PARM1Q6UWI2 310 aa11.01□□□□□ -0.65
PTPN20-228ENST00000513266 CYP26C1Q6V0L0 522 aa11.01□□□□□ -0.65
PTPN20-228ENST00000513266 GET4Q7L5D6 327 aaPredicted RBP11.01□□□□□ -0.65
PTPN20-228ENST00000513266 PDZD3Q86UT5 571 aa11.01□□□□□ -0.65
PTPN20-228ENST00000513266 ECHDC2Q86YB7 292 aa11.01□□□□□ -0.65
PTPN20-228ENST00000513266 LURAP1LQ8IV03 231 aa11.01□□□□□ -0.65
PTPN20-228ENST00000513266 SIRT2Q8IXJ6 389 aa11.01□□□□□ -0.65
PTPN20-228ENST00000513266 SAMD3Q8N6K7 520 aa11.01□□□□□ -0.65
PTPN20-228ENST00000513266 ADAM32Q8TC27 787 aa11.01□□□□□ -0.65
PTPN20-228ENST00000513266 HELQQ8TDG4 1101 aa11.01□□□□□ -0.65
PTPN20-228ENST00000513266 SEPT1Q8WYJ6 367 aa11.01□□□□□ -0.65
PTPN20-228ENST00000513266 SMG7Q92540 1137 aaKnown RBP11.01□□□□□ -0.65
PTPN20-228ENST00000513266 IGSF21Q96ID5 467 aa11.01□□□□□ -0.65
PTPN20-228ENST00000513266 PCYT2Q99447 389 aa11.01□□□□□ -0.65
PTPN20-228ENST00000513266 IGSF5Q9NSI5 407 aa11.01□□□□□ -0.65
PTPN20-228ENST00000513266 ANKFY1Q9P2R3 1169 aa11.01□□□□□ -0.65
PTPN20-228ENST00000513266 WDR81Q562E7 1941 aa11.01□□□□□ -0.65
PTPN20-228ENST00000513266 EML5Q05BV3 1969 aa11.01□□□□□ -0.65
PTPN20-228ENST00000513266 PCNX2A6NKB5 2137 aa11□□□□□ -0.65
PTPN20-228ENST00000513266 MYH9P35579 1960 aaKnown RBP11□□□□□ -0.65
PTPN20-228ENST00000513266 SHROOM3Q8TF72 1996 aa11□□□□□ -0.65
PTPN20-228ENST00000513266 DHX16O60231 1041 aaKnown RBP11□□□□□ -0.65
PTPN20-228ENST00000513266 LILRB3O75022 631 aa11□□□□□ -0.65
PTPN20-228ENST00000513266 ATP9AO75110 1047 aa11□□□□□ -0.65
PTPN20-228ENST00000513266 ZC3H11AO75152 810 aaKnown RBP eCLIP11□□□□□ -0.65
PTPN20-228ENST00000513266 PAPLNO95428 1278 aa11□□□□□ -0.65
PTPN20-228ENST00000513266 MYBP10242 640 aa11□□□□□ -0.65
PTPN20-228ENST00000513266 ODR4Q5SWX8 454 aa11□□□□□ -0.65
PTPN20-228ENST00000513266 TPRG1Q6ZUI0 275 aa11□□□□□ -0.65
PTPN20-228ENST00000513266 FAM160A2Q8N612 972 aaPredicted RBP11□□□□□ -0.65
PTPN20-228ENST00000513266 NELL2Q99435 816 aa11□□□□□ -0.65
PTPN20-228ENST00000513266 SCNM1Q9BWG6 230 aa11□□□□□ -0.65
PTPN20-228ENST00000513266 EMILIN2Q9BXX0 1053 aa11□□□□□ -0.65
PTPN20-228ENST00000513266 ECHDC1Q9NTX5 307 aa11□□□□□ -0.65
PTPN20-228ENST00000513266 COL4A2P08572 1712 aa11□□□□□ -0.65
PTPN20-228ENST00000513266 MYO18BQ8IUG5 2567 aa10.99□□□□□ -0.65
PTPN20-228ENST00000513266 GCOM1H8Y6P7 765 aaPredicted RBP10.99□□□□□ -0.65
PTPN20-228ENST00000513266 NCAM2O15394 837 aa10.99□□□□□ -0.65
PTPN20-228ENST00000513266 SSBP05455 408 aaKnown RBP eCLIP10.99□□□□□ -0.65
PTPN20-228ENST00000513266 POLR2MP0CAP2 368 aa10.99□□□□□ -0.65
PTPN20-228ENST00000513266 KCNA2P16389 499 aa10.99□□□□□ -0.65
PTPN20-228ENST00000513266 NOVA1P51513 510 aaKnown RBP10.99□□□□□ -0.65
PTPN20-228ENST00000513266 ZNF252P-AS1Q0IIN9 211 aa10.99□□□□□ -0.65
PTPN20-228ENST00000513266 ASPRV1Q53RT3 343 aa10.99□□□□□ -0.65
PTPN20-228ENST00000513266 ZMYM1Q5SVZ6 1142 aa10.99□□□□□ -0.65
PTPN20-228ENST00000513266 VPS53Q5VIR6 699 aa10.99□□□□□ -0.65
PTPN20-228ENST00000513266 TSHZ3Q63HK5 1081 aa10.99□□□□□ -0.65
PTPN20-228ENST00000513266 C19orf48Q6RUI8 117 aa10.99□□□□□ -0.65
PTPN20-228ENST00000513266 MTHFD1LQ6UB35 978 aa10.99□□□□□ -0.65
PTPN20-228ENST00000513266 MAMSTRQ6ZN01 415 aa10.99□□□□□ -0.65
PTPN20-228ENST00000513266 ZNF598Q86UK7 904 aaKnown RBP10.99□□□□□ -0.65
PTPN20-228ENST00000513266 KIAA0319LQ8IZA0 1049 aa10.99□□□□□ -0.65
PTPN20-228ENST00000513266 ZNF687Q8N1G0 1237 aa10.99□□□□□ -0.65
PTPN20-228ENST00000513266 C12orf50Q8NA57 414 aaPredicted RBP10.99□□□□□ -0.65
PTPN20-228ENST00000513266 RNF169Q8NCN4 708 aa10.99□□□□□ -0.65
PTPN20-228ENST00000513266 GIMAP8Q8ND71 665 aaPredicted RBP10.99□□□□□ -0.65
PTPN20-228ENST00000513266 MTMR8Q96EF0 704 aa10.99□□□□□ -0.65
PTPN20-228ENST00000513266 PPP1R16BQ96T49 567 aa10.99□□□□□ -0.65
PTPN20-228ENST00000513266 OSMRQ99650 979 aa10.99□□□□□ -0.65
PTPN20-228ENST00000513266 CHRDQ9H2X0 955 aa10.99□□□□□ -0.65
PTPN20-228ENST00000513266 DACH1Q9UI36 760 aa10.99□□□□□ -0.65
PTPN20-228ENST00000513266 GPSM3Q9Y4H4 160 aa10.99□□□□□ -0.65
PTPN20-228ENST00000513266 ACACAQ13085 2346 aa10.99□□□□□ -0.65
PTPN20-228ENST00000513266 PDCD11Q14690 1871 aaKnown RBP10.99□□□□□ -0.65
PTPN20-228ENST00000513266 ASCC3Q8N3C0 2202 aaKnown RBP10.99□□□□□ -0.65
PTPN20-228ENST00000513266 ZNF316A6NFI3 1004 aaPredicted RBP10.98□□□□□ -0.65
PTPN20-228ENST00000513266 ANP32CO43423 234 aa10.98□□□□□ -0.65
PTPN20-228ENST00000513266 ZNF806P0C7X5 589 aa10.98□□□□□ -0.65
PTPN20-228ENST00000513266 ADCY1Q08828 1119 aa10.98□□□□□ -0.65
PTPN20-228ENST00000513266 FTSJ3Q8IY81 847 aaKnown RBP10.98□□□□□ -0.65
PTPN20-228ENST00000513266 PNMA1Q8ND90 353 aa10.98□□□□□ -0.65
PTPN20-228ENST00000513266 ZKSCAN3Q9BRR0 538 aa10.98□□□□□ -0.65
PTPN20-228ENST00000513266 MRPL9Q9BYD2 267 aaKnown RBP10.98□□□□□ -0.65
PTPN20-228ENST00000513266 CACNA2D2Q9NY47 1150 aa10.98□□□□□ -0.65
PTPN20-228ENST00000513266 NUP205Q92621 2012 aa10.97□□□□□ -0.65
PTPN20-228ENST00000513266 CHURC1-FNTBB4DL54 471 aa10.97□□□□□ -0.65
PTPN20-228ENST00000513266 SMARCA5O60264 1052 aaPredicted RBP10.97□□□□□ -0.65
PTPN20-228ENST00000513266 GALTP07902 379 aa10.97□□□□□ -0.65
PTPN20-228ENST00000513266 KLRC1P26715 233 aa10.97□□□□□ -0.65
PTPN20-228ENST00000513266 FNTBP49356 437 aa10.97□□□□□ -0.65
PTPN20-228ENST00000513266 PFKPQ01813 784 aa10.97□□□□□ -0.65
PTPN20-228ENST00000513266 KIZQ2M2Z5 673 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms