RNA–Protein interactions for RNA: ENST00000513243.5

DDR1-272, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 549 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-272ENST00000513243 SFPQP23246 707 aaKnown RBP eCLIP19.75■□□□□ 0.75
DDR1-272ENST00000513243 ARL2P36404 184 aa19.75■□□□□ 0.75
DDR1-272ENST00000513243 CCDC85BQ15834 202 aaPredicted RBP19.75■□□□□ 0.75
DDR1-272ENST00000513243 BRAPQ7Z569 592 aa19.75■□□□□ 0.75
DDR1-272ENST00000513243 CMTR2Q8IYT2 770 aaKnown RBP19.75■□□□□ 0.75
DDR1-272ENST00000513243 RNF149Q8NC42 400 aa19.75■□□□□ 0.75
DDR1-272ENST00000513243 FBXO22Q8NEZ5 403 aa19.75■□□□□ 0.75
DDR1-272ENST00000513243 PPM1EQ8WY54 764 aa19.75■□□□□ 0.75
DDR1-272ENST00000513243 SAMD11Q96NU1 681 aa19.75■□□□□ 0.75
DDR1-272ENST00000513243 RAB34Q9BZG1 259 aa19.75■□□□□ 0.75
DDR1-272ENST00000513243 TMEM161AQ9NX61 479 aa19.75■□□□□ 0.75
DDR1-272ENST00000513243 GTPBP6O43824 516 aaPredicted RBP19.74■□□□□ 0.75
DDR1-272ENST00000513243 USO1O60763 962 aaKnown RBP19.74■□□□□ 0.75
DDR1-272ENST00000513243 CDC25AP30304 524 aa19.74■□□□□ 0.75
DDR1-272ENST00000513243 MXD4Q14582 209 aaPredicted RBP19.74■□□□□ 0.75
DDR1-272ENST00000513243 PAN2Q504Q3 1202 aaKnown RBP19.74■□□□□ 0.75
DDR1-272ENST00000513243 FAM102BQ5T8I3 360 aa19.74■□□□□ 0.75
DDR1-272ENST00000513243 SRGAP1Q7Z6B7 1085 aa19.74■□□□□ 0.75
DDR1-272ENST00000513243 SLC17A8Q8NDX2 589 aa19.74■□□□□ 0.75
DDR1-272ENST00000513243 ASAP3Q8TDY4 903 aa19.74■□□□□ 0.75
DDR1-272ENST00000513243 SNX29Q8TEQ0 813 aa19.74■□□□□ 0.75
DDR1-272ENST00000513243 CLP1Q92989 425 aaKnown RBP19.74■□□□□ 0.75
DDR1-272ENST00000513243 ELAC1Q9H777 363 aaKnown RBP19.74■□□□□ 0.75
DDR1-272ENST00000513243 MINDY3Q9H8M7 445 aa19.74■□□□□ 0.75
DDR1-272ENST00000513243 CHST12Q9NRB3 414 aa19.74■□□□□ 0.75
DDR1-272ENST00000513243 RNF216Q9NWF9 866 aaPredicted RBP19.74■□□□□ 0.75
DDR1-272ENST00000513243 MRPL42Q9Y6G3 142 aaKnown RBP19.74■□□□□ 0.75
DDR1-272ENST00000513243 MAEAQ7L5Y9 396 aa19.73■□□□□ 0.75
DDR1-272ENST00000513243 CATSPER4Q7RTX7 472 aa19.73■□□□□ 0.75
DDR1-272ENST00000513243 ECHDC2Q86YB7 292 aa19.73■□□□□ 0.75
DDR1-272ENST00000513243 MICALL1Q8N3F8 863 aa19.73■□□□□ 0.75
DDR1-272ENST00000513243 MMTAG2Q9BU76 263 aaKnown RBP19.73■□□□□ 0.75
DDR1-272ENST00000513243 KIAA1024Q9UPX6 916 aa19.73■□□□□ 0.75
DDR1-272ENST00000513243 STK24Q9Y6E0 443 aa19.73■□□□□ 0.75
DDR1-272ENST00000513243 EYSQ5T1H1 3165 aa19.73■□□□□ 0.75
DDR1-272ENST00000513243 A0A0U1RQF3 1178 aa19.72■□□□□ 0.75
DDR1-272ENST00000513243 ARHGEF35A5YM69 484 aa19.72■□□□□ 0.75
DDR1-272ENST00000513243 H3BNC9 293 aa19.72■□□□□ 0.75
DDR1-272ENST00000513243 FGFR1P11362 822 aa19.72■□□□□ 0.75
DDR1-272ENST00000513243 GLRA2P23416 452 aa19.72■□□□□ 0.75
DDR1-272ENST00000513243 BMPR1AP36894 532 aa19.72■□□□□ 0.75
DDR1-272ENST00000513243 PTENP60484 403 aa19.72■□□□□ 0.75
DDR1-272ENST00000513243 KRT79Q5XKE5 535 aa19.72■□□□□ 0.75
DDR1-272ENST00000513243 ARL6IP4Q66PJ3 421 aaKnown RBP19.72■□□□□ 0.75
DDR1-272ENST00000513243 PADI6Q6TGC4 694 aa19.72■□□□□ 0.75
DDR1-272ENST00000513243 POLR3FQ9H1D9 316 aaPredicted RBP19.72■□□□□ 0.75
DDR1-272ENST00000513243 GPRC5CQ9NQ84 441 aa19.72■□□□□ 0.75
DDR1-272ENST00000513243 DDX19AQ9NUU7 478 aaKnown RBP19.72■□□□□ 0.75
DDR1-272ENST00000513243 RNF19AQ9NV58 838 aa19.72■□□□□ 0.75
DDR1-272ENST00000513243 DACT1Q9NYF0 836 aa19.72■□□□□ 0.75
DDR1-272ENST00000513243 PIN4Q9Y237 131 aaKnown RBP19.72■□□□□ 0.75
DDR1-272ENST00000513243 TRANK1O15050 2925 aa19.72■□□□□ 0.75
DDR1-272ENST00000513243 COL4A4P53420 1690 aaPredicted RBP19.71■□□□□ 0.75
DDR1-272ENST00000513243 VWA3AA6NCI4 1184 aa19.71■□□□□ 0.75
DDR1-272ENST00000513243 TBKBP1A7MCY6 615 aa19.71■□□□□ 0.75
DDR1-272ENST00000513243 C5orf67F2Z3F1 127 aa19.71■□□□□ 0.75
DDR1-272ENST00000513243 CYP11B2P19099 503 aa19.71■□□□□ 0.75
DDR1-272ENST00000513243 CTNNB1P35222 781 aa19.71■□□□□ 0.75
DDR1-272ENST00000513243 PHKA2P46019 1235 aa19.71■□□□□ 0.75
DDR1-272ENST00000513243 POU5F1BQ06416 359 aa19.71■□□□□ 0.75
DDR1-272ENST00000513243 RESTQ13127 1097 aa19.71■□□□□ 0.75
DDR1-272ENST00000513243 GPM6BQ13491 265 aa19.71■□□□□ 0.75
DDR1-272ENST00000513243 CAPSQ13938 189 aa19.71■□□□□ 0.75
DDR1-272ENST00000513243 TFDP1Q14186 410 aa19.71■□□□□ 0.75
DDR1-272ENST00000513243 ZNF598Q86UK7 904 aaKnown RBP19.71■□□□□ 0.75
DDR1-272ENST00000513243 MCPH1Q8NEM0 835 aa19.71■□□□□ 0.75
DDR1-272ENST00000513243 TRAIPQ9BWF2 469 aa19.71■□□□□ 0.75
DDR1-272ENST00000513243 BHMT2Q9H2M3 363 aa19.71■□□□□ 0.75
DDR1-272ENST00000513243 AGPAT5Q9NUQ2 364 aa19.71■□□□□ 0.75
DDR1-272ENST00000513243 LMCD1Q9NZU5 365 aa19.71■□□□□ 0.75
DDR1-272ENST00000513243 MTMR6Q9Y217 621 aa19.71■□□□□ 0.75
DDR1-272ENST00000513243 PRRC2BQ5JSZ5 2229 aaKnown RBP19.71■□□□□ 0.75
DDR1-272ENST00000513243 RB1P06400 928 aa19.7■□□□□ 0.74
DDR1-272ENST00000513243 ATF7P17544 494 aaPredicted RBP19.7■□□□□ 0.74
DDR1-272ENST00000513243 HOXA11P31270 313 aaPredicted RBP19.7■□□□□ 0.74
DDR1-272ENST00000513243 TWF2Q6IBS0 349 aaKnown RBP19.7■□□□□ 0.74
DDR1-272ENST00000513243 IFNLR1Q8IU57 520 aaPredicted RBP19.7■□□□□ 0.74
DDR1-272ENST00000513243 HSCBQ8IWL3 235 aa19.7■□□□□ 0.74
DDR1-272ENST00000513243 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.7■□□□□ 0.74
DDR1-272ENST00000513243 RNF169Q8NCN4 708 aa19.7■□□□□ 0.74
DDR1-272ENST00000513243 PRDM6Q9NQX0 595 aa19.7■□□□□ 0.74
DDR1-272ENST00000513243 RWDD3Q9Y3V2 267 aa19.7■□□□□ 0.74
DDR1-272ENST00000513243 E9PMD0 336 aa19.69■□□□□ 0.74
DDR1-272ENST00000513243 EOMESO95936 686 aa19.69■□□□□ 0.74
DDR1-272ENST00000513243 SF3A1Q15459 793 aaKnown RBP19.69■□□□□ 0.74
DDR1-272ENST00000513243 CASD1Q96PB1 797 aa19.69■□□□□ 0.74
DDR1-272ENST00000513243 TMEM117Q9H0C3 514 aa19.69■□□□□ 0.74
DDR1-272ENST00000513243 DNM3Q9UQ16 869 aa19.69■□□□□ 0.74
DDR1-272ENST00000513243 NLRC5Q86WI3 1866 aa19.69■□□□□ 0.74
DDR1-272ENST00000513243 PRUNE2Q8WUY3 3088 aa19.68■□□□□ 0.74
DDR1-272ENST00000513243 INO80B-WBP1J3KQ70 363 aa19.68■□□□□ 0.74
DDR1-272ENST00000513243 HOXA2O43364 376 aa19.68■□□□□ 0.74
DDR1-272ENST00000513243 STX6O43752 255 aa19.68■□□□□ 0.74
DDR1-272ENST00000513243 EYA4O95677 639 aa19.68■□□□□ 0.74
DDR1-272ENST00000513243 BMP15O95972 392 aa19.68■□□□□ 0.74
DDR1-272ENST00000513243 MBTD1Q05BQ5 628 aa19.68■□□□□ 0.74
DDR1-272ENST00000513243 CLLU1OSQ5K130 101 aa19.68■□□□□ 0.74
DDR1-272ENST00000513243 FAM173BQ6P4H8 233 aa19.68■□□□□ 0.74
DDR1-272ENST00000513243 KCNK18Q7Z418 384 aa19.68■□□□□ 0.74
DDR1-272ENST00000513243 MRPL38Q96DV4 380 aaKnown RBP19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms