RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 SEPT1Q8WYJ6 367 aa8.91□□□□□ -0.98
HTT-209ENST00000512068 HPS3Q969F9 1004 aa8.91□□□□□ -0.98
HTT-209ENST00000512068 FAM167AQ96KS9 214 aa8.91□□□□□ -0.98
HTT-209ENST00000512068 CEP170P1Q96L14 293 aa8.91□□□□□ -0.98
HTT-209ENST00000512068 SRRTQ9BXP5 876 aaKnown RBP8.91□□□□□ -0.98
HTT-209ENST00000512068 PRKD2Q9BZL6 878 aa8.91□□□□□ -0.98
HTT-209ENST00000512068 NRBP2Q9NSY0 501 aa8.91□□□□□ -0.98
HTT-209ENST00000512068 CPA4Q9UI42 421 aa8.91□□□□□ -0.98
HTT-209ENST00000512068 KCNG1Q9UIX4 513 aa8.91□□□□□ -0.98
HTT-209ENST00000512068 DIS3Q9Y2L1 958 aaKnown RBP8.91□□□□□ -0.98
HTT-209ENST00000512068 PCDHB9Q9Y5E1 797 aa8.91□□□□□ -0.98
HTT-209ENST00000512068 ARID2Q68CP9 1835 aa8.91□□□□□ -0.98
HTT-209ENST00000512068 UTRNP46939 3433 aa8.9□□□□□ -0.98
HTT-209ENST00000512068 ZNF236Q9UL36 1845 aa8.9□□□□□ -0.98
HTT-209ENST00000512068 H0YCG3 227 aa8.9□□□□□ -0.98
HTT-209ENST00000512068 EIF3DO15371 548 aaKnown RBP eCLIP8.9□□□□□ -0.98
HTT-209ENST00000512068 COBLO75128 1261 aa8.9□□□□□ -0.98
HTT-209ENST00000512068 DGAT1O75907 488 aa8.9□□□□□ -0.98
HTT-209ENST00000512068 TOMM70O94826 608 aa8.9□□□□□ -0.98
HTT-209ENST00000512068 FARP2O94887 1054 aaPredicted RBP8.9□□□□□ -0.98
HTT-209ENST00000512068 GNA14O95837 355 aa8.9□□□□□ -0.98
HTT-209ENST00000512068 ALDH1A1P00352 501 aa8.9□□□□□ -0.98
HTT-209ENST00000512068 SFPQP23246 707 aaKnown RBP eCLIP8.9□□□□□ -0.98
HTT-209ENST00000512068 RPL13P26373 211 aaKnown RBP8.9□□□□□ -0.98
HTT-209ENST00000512068 ABCD1P33897 745 aa8.9□□□□□ -0.98
HTT-209ENST00000512068 POLGP54098 1239 aaPredicted RBP8.9□□□□□ -0.98
HTT-209ENST00000512068 FKBP3Q00688 224 aaKnown RBP8.9□□□□□ -0.98
HTT-209ENST00000512068 EHHADHQ08426 723 aa8.9□□□□□ -0.98
HTT-209ENST00000512068 DMP1Q13316 513 aaPredicted RBP8.9□□□□□ -0.98
HTT-209ENST00000512068 GRB14Q14449 540 aa8.9□□□□□ -0.98
HTT-209ENST00000512068 LRRC41Q15345 812 aa8.9□□□□□ -0.98
HTT-209ENST00000512068 UGCGQ16739 394 aa8.9□□□□□ -0.98
HTT-209ENST00000512068 ZNF792Q3KQV3 632 aa8.9□□□□□ -0.98
HTT-209ENST00000512068 TCP11X2Q5H9J9 407 aa8.9□□□□□ -0.98
HTT-209ENST00000512068 UTP14CQ5TAP6 766 aaKnown RBP8.9□□□□□ -0.98
HTT-209ENST00000512068 ANKRD40Q6AI12 368 aa8.9□□□□□ -0.98
HTT-209ENST00000512068 CENPPQ6IPU0 288 aa8.9□□□□□ -0.98
HTT-209ENST00000512068 TTI2Q6NXR4 508 aa8.9□□□□□ -0.98
HTT-209ENST00000512068 FOXR2Q6PJQ5 311 aa8.9□□□□□ -0.98
HTT-209ENST00000512068 ABHD15Q6UXT9 468 aa8.9□□□□□ -0.98
HTT-209ENST00000512068 MAEAQ7L5Y9 396 aa8.9□□□□□ -0.98
HTT-209ENST00000512068 HS2ST1Q7LGA3 356 aa8.9□□□□□ -0.98
HTT-209ENST00000512068 CCDC186Q7Z3E2 898 aa8.9□□□□□ -0.98
HTT-209ENST00000512068 ZSCAN30Q86W11 494 aa8.9□□□□□ -0.98
HTT-209ENST00000512068 PPFIBP1Q86W92 1011 aa8.9□□□□□ -0.98
HTT-209ENST00000512068 EXOC8Q8IYI6 725 aa8.9□□□□□ -0.98
HTT-209ENST00000512068 SYCP3Q8IZU3 236 aa8.9□□□□□ -0.98
HTT-209ENST00000512068 EHBP1Q8NDI1 1231 aa8.9□□□□□ -0.98
HTT-209ENST00000512068 MCPH1Q8NEM0 835 aa8.9□□□□□ -0.98
HTT-209ENST00000512068 GOLGA5Q8TBA6 731 aa8.9□□□□□ -0.98
HTT-209ENST00000512068 FAM174AQ8TBP5 190 aa8.9□□□□□ -0.98
HTT-209ENST00000512068 MORC4Q8TE76 937 aa8.9□□□□□ -0.98
HTT-209ENST00000512068 KIFAP3Q92845 792 aa8.9□□□□□ -0.98
HTT-209ENST00000512068 GLG1Q92896 1179 aa8.9□□□□□ -0.98
HTT-209ENST00000512068 HHIPL1Q96JK4 782 aa8.9□□□□□ -0.98
HTT-209ENST00000512068 IFT74Q96LB3 600 aa8.9□□□□□ -0.98
HTT-209ENST00000512068 CNOT6LQ96LI5 555 aaKnown RBP8.9□□□□□ -0.98
HTT-209ENST00000512068 SPATA33Q96N06 139 aa8.9□□□□□ -0.98
HTT-209ENST00000512068 PTPN18Q99952 460 aa8.9□□□□□ -0.98
HTT-209ENST00000512068 ATP6V0A4Q9HBG4 840 aa8.9□□□□□ -0.98
HTT-209ENST00000512068 OLFML3Q9NRN5 406 aa8.9□□□□□ -0.98
HTT-209ENST00000512068 ZHX1Q9UKY1 873 aaPredicted RBP8.9□□□□□ -0.98
HTT-209ENST00000512068 ASTN1O14525 1302 aa8.89□□□□□ -0.99
HTT-209ENST00000512068 IGSF9BQ9UPX0 1349 aa8.89□□□□□ -0.99
HTT-209ENST00000512068 RSPH10B2B2RC85 870 aa8.89□□□□□ -0.99
HTT-209ENST00000512068 IGF2BP3O00425 579 aaKnown RBP eCLIP8.89□□□□□ -0.99
HTT-209ENST00000512068 ZBTB39O15060 712 aa8.89□□□□□ -0.99
HTT-209ENST00000512068 CETN3O15182 167 aa8.89□□□□□ -0.99
HTT-209ENST00000512068 TLR2O60603 784 aa8.89□□□□□ -0.99
HTT-209ENST00000512068 GH1P01241 217 aa8.89□□□□□ -0.99
HTT-209ENST00000512068 RSPH10BP0C881 870 aa8.89□□□□□ -0.99
HTT-209ENST00000512068 PTGS1P23219 599 aa8.89□□□□□ -0.99
HTT-209ENST00000512068 RGS2P41220 211 aa8.89□□□□□ -0.99
HTT-209ENST00000512068 STAT5BP51692 787 aa8.89□□□□□ -0.99
HTT-209ENST00000512068 COPB1P53618 953 aaKnown RBP8.89□□□□□ -0.99
HTT-209ENST00000512068 FSTL1Q12841 308 aa8.89□□□□□ -0.99
HTT-209ENST00000512068 LAMC2Q13753 1193 aa8.89□□□□□ -0.99
HTT-209ENST00000512068 TRIM14Q14142 442 aa8.89□□□□□ -0.99
HTT-209ENST00000512068 KRT31Q15323 416 aa8.89□□□□□ -0.99
HTT-209ENST00000512068 LY6KQ17RY6 165 aa8.89□□□□□ -0.99
HTT-209ENST00000512068 KNOP1Q1ED39 458 aaKnown RBP8.89□□□□□ -0.99
HTT-209ENST00000512068 MTERF2Q49AM1 385 aa8.89□□□□□ -0.99
HTT-209ENST00000512068 CELF3Q5SZQ8 465 aaKnown RBP8.89□□□□□ -0.99
HTT-209ENST00000512068 PLA2G4FQ68DD2 849 aa8.89□□□□□ -0.99
HTT-209ENST00000512068 SPECC1LQ69YQ0 1117 aa8.89□□□□□ -0.99
HTT-209ENST00000512068 VSTM4Q8IW00 320 aa8.89□□□□□ -0.99
HTT-209ENST00000512068 CCDC60Q8IWA6 550 aaPredicted RBP8.89□□□□□ -0.99
HTT-209ENST00000512068 MSL3Q8N5Y2 521 aaKnown RBP8.89□□□□□ -0.99
HTT-209ENST00000512068 SOCS4Q8WXH5 440 aa8.89□□□□□ -0.99
HTT-209ENST00000512068 SLC7A3Q8WY07 619 aa8.89□□□□□ -0.99
HTT-209ENST00000512068 CEP63Q96MT8 703 aa8.89□□□□□ -0.99
HTT-209ENST00000512068 NOC4LQ9BVI4 516 aaKnown RBP8.89□□□□□ -0.99
HTT-209ENST00000512068 TMEM206Q9H813 350 aa8.89□□□□□ -0.99
HTT-209ENST00000512068 TYW1Q9NV66 732 aaKnown RBP8.89□□□□□ -0.99
HTT-209ENST00000512068 TAB2Q9NYJ8 693 aa8.89□□□□□ -0.99
HTT-209ENST00000512068 WRAP73Q9P2S5 460 aaPredicted RBP8.89□□□□□ -0.99
HTT-209ENST00000512068 LIMA1Q9UHB6 759 aaKnown RBP8.89□□□□□ -0.99
HTT-209ENST00000512068 DDX41Q9UJV9 622 aaKnown RBP8.89□□□□□ -0.99
HTT-209ENST00000512068 CDV3Q9UKY7 258 aaKnown RBP8.89□□□□□ -0.99
HTT-209ENST00000512068 EXOC7Q9UPT5 735 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms