RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 SP7Q8TDD2 431 aaPredicted RBP15.54■□□□□ 0.08
DDX41-212ENST00000511040 TGS1Q96RS0 853 aaKnown RBP15.54■□□□□ 0.08
DDX41-212ENST00000511040 GAS2L1Q99501 681 aaPredicted RBP15.54■□□□□ 0.08
DDX41-212ENST00000511040 C17orf80Q9BSJ5 609 aa15.54■□□□□ 0.08
DDX41-212ENST00000511040 MINDY3Q9H8M7 445 aa15.54■□□□□ 0.08
DDX41-212ENST00000511040 POLD4Q9HCU8 107 aa15.54■□□□□ 0.08
DDX41-212ENST00000511040 C1orf112Q9NSG2 853 aa15.54■□□□□ 0.08
DDX41-212ENST00000511040 PCDHB7Q9Y5E2 793 aa15.54■□□□□ 0.08
DDX41-212ENST00000511040 CHD7Q9P2D1 2997 aa15.53■□□□□ 0.08
DDX41-212ENST00000511040 E9PMD0 336 aa15.53■□□□□ 0.08
DDX41-212ENST00000511040 DGKIO75912 1065 aa15.53■□□□□ 0.08
DDX41-212ENST00000511040 STAG3L1P0CL83 205 aa15.53■□□□□ 0.08
DDX41-212ENST00000511040 ZSCAN20P17040 1043 aaPredicted RBP15.53■□□□□ 0.08
DDX41-212ENST00000511040 SFPQP23246 707 aaKnown RBP eCLIP15.53■□□□□ 0.08
DDX41-212ENST00000511040 GLRA2P23416 452 aa15.53■□□□□ 0.08
DDX41-212ENST00000511040 ERVK-21P61565 698 aa15.53■□□□□ 0.08
DDX41-212ENST00000511040 FAM102BQ5T8I3 360 aa15.53■□□□□ 0.08
DDX41-212ENST00000511040 ARL6IP4Q66PJ3 421 aaKnown RBP15.53■□□□□ 0.08
DDX41-212ENST00000511040 CATSPER4Q7RTX7 472 aa15.53■□□□□ 0.08
DDX41-212ENST00000511040 KCNK18Q7Z418 384 aa15.53■□□□□ 0.08
DDX41-212ENST00000511040 CRIPAKQ8N1N5 446 aa15.53■□□□□ 0.08
DDX41-212ENST00000511040 RNF169Q8NCN4 708 aa15.53■□□□□ 0.08
DDX41-212ENST00000511040 GDPD5Q8WTR4 605 aa15.53■□□□□ 0.08
DDX41-212ENST00000511040 BHMT2Q9H2M3 363 aa15.53■□□□□ 0.08
DDX41-212ENST00000511040 STK24Q9Y6E0 443 aa15.53■□□□□ 0.08
DDX41-212ENST00000511040 ADGRA3Q8IWK6 1321 aa15.52■□□□□ 0.08
DDX41-212ENST00000511040 COL4A6Q14031 1691 aa15.52■□□□□ 0.08
DDX41-212ENST00000511040 ASAP2O43150 1006 aa15.52■□□□□ 0.08
DDX41-212ENST00000511040 BMP15O95972 392 aa15.52■□□□□ 0.08
DDX41-212ENST00000511040 FGFR1P11362 822 aa15.52■□□□□ 0.08
DDX41-212ENST00000511040 MUTP22033 750 aa15.52■□□□□ 0.08
DDX41-212ENST00000511040 MARCKSP29966 332 aaPredicted RBP15.52■□□□□ 0.08
DDX41-212ENST00000511040 PHKA2P46019 1235 aa15.52■□□□□ 0.08
DDX41-212ENST00000511040 CAPSQ13938 189 aa15.52■□□□□ 0.08
DDX41-212ENST00000511040 TFDP1Q14186 410 aa15.52■□□□□ 0.08
DDX41-212ENST00000511040 BTG3Q14201 252 aaPredicted RBP15.52■□□□□ 0.08
DDX41-212ENST00000511040 MXD4Q14582 209 aaPredicted RBP15.52■□□□□ 0.08
DDX41-212ENST00000511040 PTPAQ15257 358 aa15.52■□□□□ 0.08
DDX41-212ENST00000511040 FIBCD1Q8N539 461 aa15.52■□□□□ 0.08
DDX41-212ENST00000511040 MAFAQ8NHW3 353 aaPredicted RBP15.52■□□□□ 0.08
DDX41-212ENST00000511040 PPM1EQ8WY54 764 aa15.52■□□□□ 0.08
DDX41-212ENST00000511040 PNMA5Q96PV4 448 aa15.52■□□□□ 0.08
DDX41-212ENST00000511040 INO80BQ9C086 356 aaPredicted RBP15.52■□□□□ 0.08
DDX41-212ENST00000511040 RC3H2Q9HBD1 1191 aaKnown RBP15.52■□□□□ 0.08
DDX41-212ENST00000511040 DNM3Q9UQ16 869 aa15.52■□□□□ 0.08
DDX41-212ENST00000511040 PIN4Q9Y237 131 aaKnown RBP15.52■□□□□ 0.08
DDX41-212ENST00000511040 CYP11B2P19099 503 aa15.51■□□□□ 0.07
DDX41-212ENST00000511040 FAM189BP81408 668 aa15.51■□□□□ 0.07
DDX41-212ENST00000511040 GRB10Q13322 594 aa15.51■□□□□ 0.07
DDX41-212ENST00000511040 FOXD4L6Q3SYB3 417 aaPredicted RBP15.51■□□□□ 0.07
DDX41-212ENST00000511040 FOXD4L3Q6VB84 417 aaPredicted RBP15.51■□□□□ 0.07
DDX41-212ENST00000511040 SRGAP1Q7Z6B7 1085 aa15.51■□□□□ 0.07
DDX41-212ENST00000511040 CABP7Q86V35 215 aa15.51■□□□□ 0.07
DDX41-212ENST00000511040 ECHDC2Q86YB7 292 aa15.51■□□□□ 0.07
DDX41-212ENST00000511040 MICALL1Q8N3F8 863 aa15.51■□□□□ 0.07
DDX41-212ENST00000511040 MCPH1Q8NEM0 835 aa15.51■□□□□ 0.07
DDX41-212ENST00000511040 BSNDQ8WZ55 320 aa15.51■□□□□ 0.07
DDX41-212ENST00000511040 ZNF689Q96CS4 500 aaPredicted RBP15.51■□□□□ 0.07
DDX41-212ENST00000511040 USP28Q96RU2 1077 aa15.51■□□□□ 0.07
DDX41-212ENST00000511040 ZSCAN16Q9H4T2 348 aaPredicted RBP15.51■□□□□ 0.07
DDX41-212ENST00000511040 MRPL42Q9Y6G3 142 aaKnown RBP15.51■□□□□ 0.07
DDX41-212ENST00000511040 LRRIQ4A6NIV6 560 aa15.5■□□□□ 0.07
DDX41-212ENST00000511040 TBKBP1A7MCY6 615 aa15.5■□□□□ 0.07
DDX41-212ENST00000511040 INO80B-WBP1J3KQ70 363 aa15.5■□□□□ 0.07
DDX41-212ENST00000511040 EYA4O95677 639 aa15.5■□□□□ 0.07
DDX41-212ENST00000511040 SSBP05455 408 aaKnown RBP eCLIP15.5■□□□□ 0.07
DDX41-212ENST00000511040 PTENP60484 403 aa15.5■□□□□ 0.07
DDX41-212ENST00000511040 PKP1Q13835 747 aa15.5■□□□□ 0.07
DDX41-212ENST00000511040 CCDC85BQ15834 202 aaPredicted RBP15.5■□□□□ 0.07
DDX41-212ENST00000511040 LONRF3Q496Y0 759 aa15.5■□□□□ 0.07
DDX41-212ENST00000511040 EPC2Q52LR7 807 aa15.5■□□□□ 0.07
DDX41-212ENST00000511040 SPECC1Q5M775 1068 aa15.5■□□□□ 0.07
DDX41-212ENST00000511040 TWF2Q6IBS0 349 aaKnown RBP15.5■□□□□ 0.07
DDX41-212ENST00000511040 TMEM192Q8IY95 271 aa15.5■□□□□ 0.07
DDX41-212ENST00000511040 CMTR2Q8IYT2 770 aaKnown RBP15.5■□□□□ 0.07
DDX41-212ENST00000511040 FBXO22Q8NEZ5 403 aa15.5■□□□□ 0.07
DDX41-212ENST00000511040 CDK5RAP3Q96JB5 506 aa15.5■□□□□ 0.07
DDX41-212ENST00000511040 RUSC1Q9BVN2 902 aa15.5■□□□□ 0.07
DDX41-212ENST00000511040 AGPAT5Q9NUQ2 364 aa15.5■□□□□ 0.07
DDX41-212ENST00000511040 TMEM161AQ9NX61 479 aa15.5■□□□□ 0.07
DDX41-212ENST00000511040 COL4A4P53420 1690 aaPredicted RBP15.5■□□□□ 0.07
DDX41-212ENST00000511040 LPXNO60711 386 aa15.49■□□□□ 0.07
DDX41-212ENST00000511040 ERLIN2O94905 339 aa15.49■□□□□ 0.07
DDX41-212ENST00000511040 CTNNB1P35222 781 aa15.49■□□□□ 0.07
DDX41-212ENST00000511040 UBA7P41226 1012 aa15.49■□□□□ 0.07
DDX41-212ENST00000511040 MBTD1Q05BQ5 628 aa15.49■□□□□ 0.07
DDX41-212ENST00000511040 TMEM119Q4V9L6 283 aa15.49■□□□□ 0.07
DDX41-212ENST00000511040 CPB2Q96IY4 423 aa15.49■□□□□ 0.07
DDX41-212ENST00000511040 CSRNP2Q9H175 543 aa15.49■□□□□ 0.07
DDX41-212ENST00000511040 CHST12Q9NRB3 414 aa15.49■□□□□ 0.07
DDX41-212ENST00000511040 RNF19AQ9NV58 838 aa15.49■□□□□ 0.07
DDX41-212ENST00000511040 DACT1Q9NYF0 836 aa15.49■□□□□ 0.07
DDX41-212ENST00000511040 TFIP11Q9UBB9 837 aaKnown RBP15.49■□□□□ 0.07
DDX41-212ENST00000511040 HCSTQ9UBK5 93 aa15.49■□□□□ 0.07
DDX41-212ENST00000511040 FBXO2Q9UK22 296 aaPredicted RBP15.49■□□□□ 0.07
DDX41-212ENST00000511040 CDH23Q9H251 3354 aa15.49■□□□□ 0.07
DDX41-212ENST00000511040 A0A0U1RQF3 1178 aa15.48■□□□□ 0.07
DDX41-212ENST00000511040 TSPAN1O60635 241 aa15.48■□□□□ 0.07
DDX41-212ENST00000511040 LINC00271P0C7V0 271 aa15.48■□□□□ 0.07
DDX41-212ENST00000511040 ZSCAN22P10073 491 aaPredicted RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms