RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 RBM8AQ9Y5S9 174 aaKnown RBP11.2□□□□□ -0.62
NEDD9-210ENST00000505589 CACNA1HO95180 2353 aa11.2□□□□□ -0.62
NEDD9-210ENST00000505589 WDR64B1ANS9 1081 aa11.19□□□□□ -0.62
NEDD9-210ENST00000505589 RBAK-RBAKDNI3L0D1 243 aa11.19□□□□□ -0.62
NEDD9-210ENST00000505589 DHX15O43143 795 aaKnown RBP11.19□□□□□ -0.62
NEDD9-210ENST00000505589 C1RP00736 705 aa11.19□□□□□ -0.62
NEDD9-210ENST00000505589 ASGR2P07307 311 aa11.19□□□□□ -0.62
NEDD9-210ENST00000505589 DARSP14868 501 aaKnown RBP11.19□□□□□ -0.62
NEDD9-210ENST00000505589 SFPQP23246 707 aaKnown RBP eCLIP11.19□□□□□ -0.62
NEDD9-210ENST00000505589 KLRC2P26717 231 aa11.19□□□□□ -0.62
NEDD9-210ENST00000505589 SFNP31947 248 aa11.19□□□□□ -0.62
NEDD9-210ENST00000505589 RAB27AP51159 221 aa11.19□□□□□ -0.62
NEDD9-210ENST00000505589 RNASELQ05823 741 aaKnown RBP11.19□□□□□ -0.62
NEDD9-210ENST00000505589 TBC1D8BQ0IIM8 1120 aa11.19□□□□□ -0.62
NEDD9-210ENST00000505589 PUM1Q14671 1186 aaKnown RBP eCLIP11.19□□□□□ -0.62
NEDD9-210ENST00000505589 BICD2Q8TD16 824 aa11.19□□□□□ -0.62
NEDD9-210ENST00000505589 HELQQ8TDG4 1101 aa11.19□□□□□ -0.62
NEDD9-210ENST00000505589 NLRP7Q8WX94 980 aa11.19□□□□□ -0.62
NEDD9-210ENST00000505589 IGSF21Q96ID5 467 aa11.19□□□□□ -0.62
NEDD9-210ENST00000505589 FAM193BQ96PV7 902 aaPredicted RBP11.19□□□□□ -0.62
NEDD9-210ENST00000505589 RHOBTB2Q9BYZ6 727 aa11.19□□□□□ -0.62
NEDD9-210ENST00000505589 ZBP1Q9H171 429 aa11.19□□□□□ -0.62
NEDD9-210ENST00000505589 ADAMTS10Q9H324 1103 aa11.19□□□□□ -0.62
NEDD9-210ENST00000505589 C6orf50Q9HD87 102 aa11.19□□□□□ -0.62
NEDD9-210ENST00000505589 GABBR1Q9UBS5 961 aa11.19□□□□□ -0.62
NEDD9-210ENST00000505589 V9GY48 417 aaPredicted RBP11.19□□□□□ -0.62
NEDD9-210ENST00000505589 LOXHD1Q8IVV2 1947 aa11.19□□□□□ -0.62
NEDD9-210ENST00000505589 KIAA1671Q9BY89 1806 aa11.19□□□□□ -0.62
NEDD9-210ENST00000505589 hCG_1642624A0A1W2PR95 340 aa11.18□□□□□ -0.62
NEDD9-210ENST00000505589 ZBTB42B2RXF5 422 aa11.18□□□□□ -0.62
NEDD9-210ENST00000505589 NR1I2O75469 434 aa11.18□□□□□ -0.62
NEDD9-210ENST00000505589 CCNE2O96020 404 aa11.18□□□□□ -0.62
NEDD9-210ENST00000505589 RXRAP19793 462 aa11.18□□□□□ -0.62
NEDD9-210ENST00000505589 ATP4AP20648 1035 aa11.18□□□□□ -0.62
NEDD9-210ENST00000505589 PHKA2P46019 1235 aa11.18□□□□□ -0.62
NEDD9-210ENST00000505589 CLK2P49760 499 aaKnown RBP11.18□□□□□ -0.62
NEDD9-210ENST00000505589 GPC3P51654 580 aa11.18□□□□□ -0.62
NEDD9-210ENST00000505589 RCAN1P53805 252 aa11.18□□□□□ -0.62
NEDD9-210ENST00000505589 LETM2Q2VYF4 491 aa11.18□□□□□ -0.62
NEDD9-210ENST00000505589 WWC2Q6AWC2 1192 aa11.18□□□□□ -0.62
NEDD9-210ENST00000505589 ZNF598Q86UK7 904 aaKnown RBP11.18□□□□□ -0.62
NEDD9-210ENST00000505589 MICU3Q86XE3 530 aa11.18□□□□□ -0.62
NEDD9-210ENST00000505589 GPR161Q8N6U8 529 aaKnown RBP11.18□□□□□ -0.62
NEDD9-210ENST00000505589 URGCPQ8TCY9 931 aa11.18□□□□□ -0.62
NEDD9-210ENST00000505589 HDAC7Q8WUI4 952 aa11.18□□□□□ -0.62
NEDD9-210ENST00000505589 IL25Q9H293 177 aa11.18□□□□□ -0.62
NEDD9-210ENST00000505589 KCNK12Q9HB15 430 aa11.18□□□□□ -0.62
NEDD9-210ENST00000505589 UBN1Q9NPG3 1134 aa11.18□□□□□ -0.62
NEDD9-210ENST00000505589 MRPL17Q9NRX2 175 aaKnown RBP11.18□□□□□ -0.62
NEDD9-210ENST00000505589 NT5C1B-RDH14C9J2C7 533 aa11.17□□□□□ -0.62
NEDD9-210ENST00000505589 FAM86B1E9PN63 330 aa11.17□□□□□ -0.62
NEDD9-210ENST00000505589 ZBTB43O43298 467 aa11.17□□□□□ -0.62
NEDD9-210ENST00000505589 ZNF623O75123 536 aa11.17□□□□□ -0.62
NEDD9-210ENST00000505589 ZC3H11AO75152 810 aaKnown RBP eCLIP11.17□□□□□ -0.62
NEDD9-210ENST00000505589 GALTP07902 379 aa11.17□□□□□ -0.62
NEDD9-210ENST00000505589 FAM86B2P0C5J1 330 aa11.17□□□□□ -0.62
NEDD9-210ENST00000505589 CLCN3P51790 818 aa11.17□□□□□ -0.62
NEDD9-210ENST00000505589 JAK3P52333 1124 aa11.17□□□□□ -0.62
NEDD9-210ENST00000505589 RTN1Q16799 776 aa11.17□□□□□ -0.62
NEDD9-210ENST00000505589 NOMO2Q5JPE7 1267 aa11.17□□□□□ -0.62
NEDD9-210ENST00000505589 CLLU1OSQ5K130 101 aa11.17□□□□□ -0.62
NEDD9-210ENST00000505589 TWF2Q6IBS0 349 aaKnown RBP11.17□□□□□ -0.62
NEDD9-210ENST00000505589 TMC5Q6UXY8 1006 aa11.17□□□□□ -0.62
NEDD9-210ENST00000505589 TRMT1LQ7Z2T5 733 aaKnown RBP11.17□□□□□ -0.62
NEDD9-210ENST00000505589 DGLUCYQ7Z3D6 616 aa11.17□□□□□ -0.62
NEDD9-210ENST00000505589 ZNF410Q86VK4 478 aa11.17□□□□□ -0.62
NEDD9-210ENST00000505589 CMASQ8NFW8 434 aaPredicted RBP11.17□□□□□ -0.62
NEDD9-210ENST00000505589 RDM1Q8NG50 284 aa11.17□□□□□ -0.62
NEDD9-210ENST00000505589 SLC22A17Q8WUG5 538 aa11.17□□□□□ -0.62
NEDD9-210ENST00000505589 SHDQ96IW2 340 aa11.17□□□□□ -0.62
NEDD9-210ENST00000505589 PPP1R16BQ96T49 567 aa11.17□□□□□ -0.62
NEDD9-210ENST00000505589 TMEM175Q9BSA9 504 aa11.17□□□□□ -0.62
NEDD9-210ENST00000505589 C22orf23Q9BZE7 217 aa11.17□□□□□ -0.62
NEDD9-210ENST00000505589 DISC1Q9NRI5 854 aa11.17□□□□□ -0.62
NEDD9-210ENST00000505589 RNF19AQ9NV58 838 aa11.17□□□□□ -0.62
NEDD9-210ENST00000505589 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.17□□□□□ -0.62
NEDD9-210ENST00000505589 HCSTQ9UBK5 93 aa11.17□□□□□ -0.62
NEDD9-210ENST00000505589 EVPLQ92817 2033 aa11.16□□□□□ -0.62
NEDD9-210ENST00000505589 ESYT2A0FGR8 921 aa11.16□□□□□ -0.62
NEDD9-210ENST00000505589 DKC1O60832 514 aaKnown RBP eCLIP11.16□□□□□ -0.62
NEDD9-210ENST00000505589 OATP04181 439 aa11.16□□□□□ -0.62
NEDD9-210ENST00000505589 HMGB1P09429 215 aaKnown RBP11.16□□□□□ -0.62
NEDD9-210ENST00000505589 GSPT1P15170 499 aaKnown RBP11.16□□□□□ -0.62
NEDD9-210ENST00000505589 PBX3P40426 434 aa11.16□□□□□ -0.62
NEDD9-210ENST00000505589 USP11P51784 963 aa11.16□□□□□ -0.62
NEDD9-210ENST00000505589 AKAP17AQ02040 695 aaKnown RBP11.16□□□□□ -0.62
NEDD9-210ENST00000505589 NCBP1Q09161 790 aaKnown RBP11.16□□□□□ -0.62
NEDD9-210ENST00000505589 PHLDB3Q6NSJ2 640 aa11.16□□□□□ -0.62
NEDD9-210ENST00000505589 SIX5Q8N196 739 aa11.16□□□□□ -0.62
NEDD9-210ENST00000505589 LINC01465Q8N7H1 131 aa11.16□□□□□ -0.62
NEDD9-210ENST00000505589 C12orf76Q8N812 135 aaPredicted RBP11.16□□□□□ -0.62
NEDD9-210ENST00000505589 CNNM3Q8NE01 707 aa11.16□□□□□ -0.62
NEDD9-210ENST00000505589 RIT2Q99578 217 aa11.16□□□□□ -0.62
NEDD9-210ENST00000505589 HINFPQ9BQA5 517 aa11.16□□□□□ -0.62
NEDD9-210ENST00000505589 ZMYND12Q9H0C1 365 aa11.16□□□□□ -0.62
NEDD9-210ENST00000505589 FAN1Q9Y2M0 1017 aa11.16□□□□□ -0.62
NEDD9-210ENST00000505589 ZFP37Q9Y6Q3 630 aaPredicted RBP11.16□□□□□ -0.62
NEDD9-210ENST00000505589 RIF1Q5UIP0 2472 aaKnown RBP11.15□□□□□ -0.62
NEDD9-210ENST00000505589 FAM186AA6NE01 2351 aa11.15□□□□□ -0.62
NEDD9-210ENST00000505589 IGLV3-22A0A075B6J6 115 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms