RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 GOLGA8AA7E2F4 631 aa5.35□□□□□ -1.55
SMC4-225ENST00000497203 GOLGA8BA8MQT2 603 aa5.35□□□□□ -1.55
SMC4-225ENST00000497203 HMGCRP04035 888 aa5.35□□□□□ -1.55
SMC4-225ENST00000497203 ITGB3P05106 788 aa5.35□□□□□ -1.55
SMC4-225ENST00000497203 MYBL2P10244 700 aa5.35□□□□□ -1.55
SMC4-225ENST00000497203 RRADP55042 308 aa5.35□□□□□ -1.55
SMC4-225ENST00000497203 ROM1Q03395 351 aa5.35□□□□□ -1.55
SMC4-225ENST00000497203 PIN1Q13526 163 aaPredicted RBP5.35□□□□□ -1.55
SMC4-225ENST00000497203 MYBPC3Q14896 1274 aa5.35□□□□□ -1.55
SMC4-225ENST00000497203 SURF1Q15526 300 aa5.35□□□□□ -1.55
SMC4-225ENST00000497203 PTPN21Q16825 1174 aa5.35□□□□□ -1.55
SMC4-225ENST00000497203 INAVAQ3KP66 663 aa5.35□□□□□ -1.55
SMC4-225ENST00000497203 GRAMD4Q6IC98 578 aa5.35□□□□□ -1.55
SMC4-225ENST00000497203 SLFN12LQ6IEE8 588 aa5.35□□□□□ -1.55
SMC4-225ENST00000497203 TIGD7Q6NT04 549 aaPredicted RBP5.35□□□□□ -1.55
SMC4-225ENST00000497203 ARHGEF18Q6ZSZ5 1173 aa5.35□□□□□ -1.55
SMC4-225ENST00000497203 ESPNLQ6ZVH7 1005 aa5.35□□□□□ -1.55
SMC4-225ENST00000497203 LIMS2Q7Z4I7 341 aa5.35□□□□□ -1.55
SMC4-225ENST00000497203 PHYKPLQ8IUZ5 450 aa5.35□□□□□ -1.55
SMC4-225ENST00000497203 IFNL2Q8IZJ0 200 aa5.35□□□□□ -1.55
SMC4-225ENST00000497203 C7orf31Q8N865 590 aa5.35□□□□□ -1.55
SMC4-225ENST00000497203 FUBP3Q96I24 572 aaKnown RBP eCLIP5.35□□□□□ -1.55
SMC4-225ENST00000497203 MAML3Q96JK9 1138 aa5.35□□□□□ -1.55
SMC4-225ENST00000497203 KIAA1683Q9H0B3 1180 aa5.35□□□□□ -1.55
SMC4-225ENST00000497203 TOPORSQ9NS56 1045 aaPredicted RBP5.35□□□□□ -1.55
SMC4-225ENST00000497203 Q9UFV3 132 aa5.35□□□□□ -1.55
SMC4-225ENST00000497203 MRFAP1Q9Y605 127 aa5.35□□□□□ -1.55
SMC4-225ENST00000497203 SLC4A7Q9Y6M7 1214 aa5.35□□□□□ -1.55
SMC4-225ENST00000497203 AKAP10O43572 662 aa5.34□□□□□ -1.55
SMC4-225ENST00000497203 SNUPNO95149 360 aaKnown RBP5.34□□□□□ -1.55
SMC4-225ENST00000497203 RAB27AP51159 221 aa5.34□□□□□ -1.55
SMC4-225ENST00000497203 STAT5BP51692 787 aa5.34□□□□□ -1.55
SMC4-225ENST00000497203 SCAND1P57086 179 aa5.34□□□□□ -1.55
SMC4-225ENST00000497203 NOLC1Q14978 699 aaKnown RBP eCLIP5.34□□□□□ -1.55
SMC4-225ENST00000497203 TBR1Q16650 682 aa5.34□□□□□ -1.55
SMC4-225ENST00000497203 ZNF827Q17R98 1081 aa5.34□□□□□ -1.55
SMC4-225ENST00000497203 ABCB5Q2M3G0 1257 aa5.34□□□□□ -1.55
SMC4-225ENST00000497203 TTC38Q5R3I4 469 aa5.34□□□□□ -1.55
SMC4-225ENST00000497203 ERICH6BQ5W0A0 696 aa5.34□□□□□ -1.55
SMC4-225ENST00000497203 TRIM68Q6AZZ1 485 aa5.34□□□□□ -1.55
SMC4-225ENST00000497203 PGM2L1Q6PCE3 622 aa5.34□□□□□ -1.55
SMC4-225ENST00000497203 PRRT2Q7Z6L0 340 aaPredicted RBP5.34□□□□□ -1.55
SMC4-225ENST00000497203 BCL6BQ8N143 479 aaPredicted RBP5.34□□□□□ -1.55
SMC4-225ENST00000497203 CBARPQ8N350 705 aaPredicted RBP5.34□□□□□ -1.55
SMC4-225ENST00000497203 C1orf162Q8NEQ5 155 aaPredicted RBP5.34□□□□□ -1.55
SMC4-225ENST00000497203 LMBR1Q8WVP7 490 aa5.34□□□□□ -1.55
SMC4-225ENST00000497203 RTF1Q92541 710 aaKnown RBP5.34□□□□□ -1.55
SMC4-225ENST00000497203 HOOK2Q96ED9 719 aa5.34□□□□□ -1.55
SMC4-225ENST00000497203 BORCS6Q96GS4 357 aa5.34□□□□□ -1.55
SMC4-225ENST00000497203 TUBGCP5Q96RT8 1024 aa5.34□□□□□ -1.55
SMC4-225ENST00000497203 WNT8AQ9H1J5 351 aa5.34□□□□□ -1.55
SMC4-225ENST00000497203 MEGF9Q9H1U4 602 aa5.34□□□□□ -1.55
SMC4-225ENST00000497203 JADE2Q9NQC1 790 aa5.34□□□□□ -1.55
SMC4-225ENST00000497203 GEMIN8Q9NWZ8 242 aaKnown RBP5.34□□□□□ -1.55
SMC4-225ENST00000497203 MKS1Q9NXB0 559 aa5.34□□□□□ -1.55
SMC4-225ENST00000497203 MAGEL2Q9UJ55 1249 aa5.34□□□□□ -1.55
SMC4-225ENST00000497203 MSRAQ9UJ68 235 aa5.34□□□□□ -1.55
SMC4-225ENST00000497203 TRIM75PA6NK02 468 aa5.33□□□□□ -1.56
SMC4-225ENST00000497203 K7ESM1 405 aa5.33□□□□□ -1.56
SMC4-225ENST00000497203 TSPAN6O43657 245 aa5.33□□□□□ -1.56
SMC4-225ENST00000497203 MAFO75444 373 aaPredicted RBP5.33□□□□□ -1.56
SMC4-225ENST00000497203 MT-CO1P00395 513 aa5.33□□□□□ -1.56
SMC4-225ENST00000497203 ADRB1P08588 477 aa5.33□□□□□ -1.56
SMC4-225ENST00000497203 RBP3P10745 1247 aa5.33□□□□□ -1.56
SMC4-225ENST00000497203 IARSP41252 1262 aaKnown RBP5.33□□□□□ -1.56
SMC4-225ENST00000497203 PCOLCEQ15113 449 aa5.33□□□□□ -1.56
SMC4-225ENST00000497203 RNF151Q2KHN1 245 aa5.33□□□□□ -1.56
SMC4-225ENST00000497203 PRAMEF9Q5VWM5 478 aa5.33□□□□□ -1.56
SMC4-225ENST00000497203 PNMA8AQ86V59 439 aaPredicted RBP5.33□□□□□ -1.56
SMC4-225ENST00000497203 SSH1Q8WYL5 1049 aa5.33□□□□□ -1.56
SMC4-225ENST00000497203 FAXDC2Q96IV6 333 aa5.33□□□□□ -1.56
SMC4-225ENST00000497203 CDH19Q9H159 772 aa5.33□□□□□ -1.56
SMC4-225ENST00000497203 SEMA4AQ9H3S1 761 aa5.33□□□□□ -1.56
SMC4-225ENST00000497203 MS4A5Q9H3V2 200 aa5.33□□□□□ -1.56
SMC4-225ENST00000497203 POFUT1Q9H488 388 aa5.33□□□□□ -1.56
SMC4-225ENST00000497203 ZIM2Q9NZV7 527 aa5.33□□□□□ -1.56
SMC4-225ENST00000497203 LCHNA4D1U4 455 aa5.32□□□□□ -1.56
SMC4-225ENST00000497203 NPEPPSL1A6NEC2 478 aa5.32□□□□□ -1.56
SMC4-225ENST00000497203 MAFGO15525 162 aa5.32□□□□□ -1.56
SMC4-225ENST00000497203 GPR42O15529 346 aa5.32□□□□□ -1.56
SMC4-225ENST00000497203 CT47B1P0C2W7 299 aaPredicted RBP5.32□□□□□ -1.56
SMC4-225ENST00000497203 U2AF1L5P0DN76 240 aaPredicted RBP5.32□□□□□ -1.56
SMC4-225ENST00000497203 RECQLP46063 649 aaPredicted RBP5.32□□□□□ -1.56
SMC4-225ENST00000497203 MRE11P49959 708 aa5.32□□□□□ -1.56
SMC4-225ENST00000497203 ANTXR2P58335 489 aa5.32□□□□□ -1.56
SMC4-225ENST00000497203 U2AF1Q01081 240 aaKnown RBP eCLIP5.32□□□□□ -1.56
SMC4-225ENST00000497203 ZMAT1Q5H9K5 638 aa5.32□□□□□ -1.56
SMC4-225ENST00000497203 TMEM240Q5SV17 173 aa5.32□□□□□ -1.56
SMC4-225ENST00000497203 AGBL4Q5VU57 503 aa5.32□□□□□ -1.56
SMC4-225ENST00000497203 SLFN13Q68D06 897 aa5.32□□□□□ -1.56
SMC4-225ENST00000497203 GLB1LQ6UWU2 654 aa5.32□□□□□ -1.56
SMC4-225ENST00000497203 CXorf67Q86X51 503 aaPredicted RBP5.32□□□□□ -1.56
SMC4-225ENST00000497203 CHPFQ8IZ52 775 aa5.32□□□□□ -1.56
SMC4-225ENST00000497203 RTKN2Q8IZC4 609 aa5.32□□□□□ -1.56
SMC4-225ENST00000497203 OR5AN1Q8NGI8 311 aa5.32□□□□□ -1.56
SMC4-225ENST00000497203 FERMT2Q96AC1 680 aa5.32□□□□□ -1.56
SMC4-225ENST00000497203 ZNF496Q96IT1 587 aaPredicted RBP5.32□□□□□ -1.56
SMC4-225ENST00000497203 GNRHR2Q96P88 292 aa5.32□□□□□ -1.56
SMC4-225ENST00000497203 LRRC37BQ96QE4 947 aa5.32□□□□□ -1.56
SMC4-225ENST00000497203 MYL10Q9BUA6 226 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms