RNA–Protein interactions for RNA: ENST00000497089.1

HOXA9-206, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 1,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-206ENST00000497089 RRP12Q5JTH9 1297 aaKnown RBP7.47□□□□□ -1.21
HOXA9-206ENST00000497089 SV2BQ7L1I2 683 aa7.47□□□□□ -1.21
HOXA9-206ENST00000497089 RPAINQ86UA6 219 aa7.47□□□□□ -1.21
HOXA9-206ENST00000497089 C7orf61Q8IZ16 206 aa7.47□□□□□ -1.21
HOXA9-206ENST00000497089 ANKRD35Q8N283 1001 aa7.47□□□□□ -1.21
HOXA9-206ENST00000497089 GPT2Q8TD30 523 aa7.47□□□□□ -1.21
HOXA9-206ENST00000497089 NOC4LQ9BVI4 516 aaKnown RBP7.47□□□□□ -1.21
HOXA9-206ENST00000497089 IL25Q9H293 177 aa7.47□□□□□ -1.21
HOXA9-206ENST00000497089 ABHD16BQ9H3Z7 469 aa7.47□□□□□ -1.21
HOXA9-206ENST00000497089 ACAD9Q9H845 621 aa7.47□□□□□ -1.21
HOXA9-206ENST00000497089 A1CFQ9NQ94 594 aaKnown RBP7.47□□□□□ -1.21
HOXA9-206ENST00000497089 TOMM22Q9NS69 142 aa7.47□□□□□ -1.21
HOXA9-206ENST00000497089 PNMA2Q9UL42 364 aa7.47□□□□□ -1.21
HOXA9-206ENST00000497089 CNPY2Q9Y2B0 182 aa7.47□□□□□ -1.21
HOXA9-206ENST00000497089 LCTP09848 1927 aa7.47□□□□□ -1.21
HOXA9-206ENST00000497089 LOC102724159A0A0B4J2E5 919 aa7.46□□□□□ -1.21
HOXA9-206ENST00000497089 ERICH4A6NGS2 130 aa7.46□□□□□ -1.21
HOXA9-206ENST00000497089 KBTBD13C9JR72 458 aa7.46□□□□□ -1.21
HOXA9-206ENST00000497089 PIK3R2O00459 728 aa7.46□□□□□ -1.21
HOXA9-206ENST00000497089 ADAMTS4O75173 837 aa7.46□□□□□ -1.21
HOXA9-206ENST00000497089 NID1P14543 1247 aa7.46□□□□□ -1.21
HOXA9-206ENST00000497089 TAL1P17542 331 aaPredicted RBP7.46□□□□□ -1.21
HOXA9-206ENST00000497089 HNRNPH2P55795 449 aaKnown RBP7.46□□□□□ -1.21
HOXA9-206ENST00000497089 NKX3-2P78367 333 aa7.46□□□□□ -1.21
HOXA9-206ENST00000497089 IKQ13123 557 aaPredicted RBP7.46□□□□□ -1.21
HOXA9-206ENST00000497089 PWP2Q15269 919 aaKnown RBP7.46□□□□□ -1.21
HOXA9-206ENST00000497089 IMMTQ16891 758 aaKnown RBP7.46□□□□□ -1.21
HOXA9-206ENST00000497089 RPS26P11Q5JNZ5 115 aaPredicted RBP7.46□□□□□ -1.21
HOXA9-206ENST00000497089 GJC2Q5T442 439 aaPredicted RBP7.46□□□□□ -1.21
HOXA9-206ENST00000497089 SYDE2Q5VT97 1194 aa7.46□□□□□ -1.21
HOXA9-206ENST00000497089 RASGRP2Q7LDG7 609 aa7.46□□□□□ -1.21
HOXA9-206ENST00000497089 CCDC91Q7Z6B0 441 aa7.46□□□□□ -1.21
HOXA9-206ENST00000497089 IQCA1Q86XH1 822 aa7.46□□□□□ -1.21
HOXA9-206ENST00000497089 RELL1Q8IUW5 271 aa7.46□□□□□ -1.21
HOXA9-206ENST00000497089 CACTIN-AS1Q8N1I8 211 aa7.46□□□□□ -1.21
HOXA9-206ENST00000497089 KLHDC9Q8NEP7 349 aa7.46□□□□□ -1.21
HOXA9-206ENST00000497089 MORC4Q8TE76 937 aa7.46□□□□□ -1.21
HOXA9-206ENST00000497089 SENP6Q9GZR1 1112 aaPredicted RBP7.46□□□□□ -1.21
HOXA9-206ENST00000497089 KATNBL1Q9H079 304 aa7.46□□□□□ -1.21
HOXA9-206ENST00000497089 DEF6Q9H4E7 631 aa7.46□□□□□ -1.21
HOXA9-206ENST00000497089 CNNM2Q9H8M5 875 aa7.46□□□□□ -1.21
HOXA9-206ENST00000497089 XPNPEP3Q9NQH7 507 aa7.46□□□□□ -1.21
HOXA9-206ENST00000497089 RNF146Q9NTX7 359 aa7.46□□□□□ -1.21
HOXA9-206ENST00000497089 ZSWIM5Q9P217 1185 aa7.46□□□□□ -1.21
HOXA9-206ENST00000497089 FAM184BQ9ULE4 1060 aa7.46□□□□□ -1.21
HOXA9-206ENST00000497089 WDR19Q8NEZ3 1342 aa7.46□□□□□ -1.22
HOXA9-206ENST00000497089 LRRC37A2A6NM11 1700 aa7.46□□□□□ -1.22
HOXA9-206ENST00000497089 LTBP2Q14767 1821 aa7.46□□□□□ -1.22
HOXA9-206ENST00000497089 B4E1Z4 1266 aa7.46□□□□□ -1.22
HOXA9-206ENST00000497089 KIF2AO00139 706 aaPredicted RBP7.46□□□□□ -1.22
HOXA9-206ENST00000497089 DUSP11O75319 330 aaKnown RBP7.46□□□□□ -1.22
HOXA9-206ENST00000497089 ADCY5O95622 1261 aa7.46□□□□□ -1.22
HOXA9-206ENST00000497089 ALAS1P13196 640 aa7.46□□□□□ -1.22
HOXA9-206ENST00000497089 CHMLP26374 656 aa7.46□□□□□ -1.22
HOXA9-206ENST00000497089 CST5P28325 142 aaPredicted RBP7.46□□□□□ -1.22
HOXA9-206ENST00000497089 PWP1Q13610 501 aa7.46□□□□□ -1.22
HOXA9-206ENST00000497089 ACVR2BQ13705 512 aa7.46□□□□□ -1.22
HOXA9-206ENST00000497089 CCDC96Q2M329 555 aa7.46□□□□□ -1.22
HOXA9-206ENST00000497089 GPATCH4Q5T3I0 446 aaKnown RBP7.46□□□□□ -1.22
HOXA9-206ENST00000497089 ANO1Q5XXA6 986 aa7.46□□□□□ -1.22
HOXA9-206ENST00000497089 CCSAPQ6IQ19 270 aaPredicted RBP7.46□□□□□ -1.22
HOXA9-206ENST00000497089 TTBK2Q6IQ55 1244 aa7.46□□□□□ -1.22
HOXA9-206ENST00000497089 GDF6Q6KF10 455 aaPredicted RBP7.46□□□□□ -1.22
HOXA9-206ENST00000497089 SLC39A5Q6ZMH5 540 aa7.46□□□□□ -1.22
HOXA9-206ENST00000497089 ARMCX2Q7L311 632 aa7.46□□□□□ -1.22
HOXA9-206ENST00000497089 RNF180Q86T96 592 aa7.46□□□□□ -1.22
HOXA9-206ENST00000497089 CCDC144CPQ8IYA2 1237 aa7.46□□□□□ -1.22
HOXA9-206ENST00000497089 ZNF654Q8IZM8 581 aa7.46□□□□□ -1.22
HOXA9-206ENST00000497089 RUFY2Q8WXA3 655 aa7.46□□□□□ -1.22
HOXA9-206ENST00000497089 TRIM11Q96F44 468 aa7.46□□□□□ -1.22
HOXA9-206ENST00000497089 KRT23Q9C075 422 aa7.46□□□□□ -1.22
HOXA9-206ENST00000497089 LACRTQ9GZZ8 138 aa7.46□□□□□ -1.22
HOXA9-206ENST00000497089 MAF1Q9H063 256 aa7.46□□□□□ -1.22
HOXA9-206ENST00000497089 UPF3AQ9H1J1 476 aaKnown RBP7.46□□□□□ -1.22
HOXA9-206ENST00000497089 ZNF576Q9H609 170 aa7.46□□□□□ -1.22
HOXA9-206ENST00000497089 CYP39A1Q9NYL5 469 aa7.46□□□□□ -1.22
HOXA9-206ENST00000497089 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.46□□□□□ -1.22
HOXA9-206ENST00000497089 GPN3Q9UHW5 284 aaPredicted RBP7.46□□□□□ -1.22
HOXA9-206ENST00000497089 CCPG1Q9ULG6 757 aa7.46□□□□□ -1.22
HOXA9-206ENST00000497089 ZMYND8Q9ULU4 1186 aaPredicted RBP7.46□□□□□ -1.22
HOXA9-206ENST00000497089 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.46□□□□□ -1.22
HOXA9-206ENST00000497089 ASTN1O14525 1302 aa7.45□□□□□ -1.22
HOXA9-206ENST00000497089 SYNRGQ9UMZ2 1314 aa7.45□□□□□ -1.22
HOXA9-206ENST00000497089 ASB14A6NK59 587 aa7.45□□□□□ -1.22
HOXA9-206ENST00000497089 ATP8B1O43520 1251 aa7.45□□□□□ -1.22
HOXA9-206ENST00000497089 FBXO24O75426 580 aa7.45□□□□□ -1.22
HOXA9-206ENST00000497089 PGK1P00558 417 aa7.45□□□□□ -1.22
HOXA9-206ENST00000497089 SLC16A2P36021 539 aa7.45□□□□□ -1.22
HOXA9-206ENST00000497089 ADCYAP1R1P41586 468 aa7.45□□□□□ -1.22
HOXA9-206ENST00000497089 MAGEA10P43363 369 aaPredicted RBP7.45□□□□□ -1.22
HOXA9-206ENST00000497089 RTP1P59025 263 aa7.45□□□□□ -1.22
HOXA9-206ENST00000497089 CNTN2Q02246 1040 aa7.45□□□□□ -1.22
HOXA9-206ENST00000497089 PPP2R3AQ06190 1150 aa7.45□□□□□ -1.22
HOXA9-206ENST00000497089 GNL2Q13823 731 aaKnown RBP7.45□□□□□ -1.22
HOXA9-206ENST00000497089 CCDC144BQ3MJ40 725 aa7.45□□□□□ -1.22
HOXA9-206ENST00000497089 NAALADL2Q58DX5 795 aa7.45□□□□□ -1.22
HOXA9-206ENST00000497089 CCDC183Q5T5S1 534 aa7.45□□□□□ -1.22
HOXA9-206ENST00000497089 CCDC174Q6PII3 467 aa7.45□□□□□ -1.22
HOXA9-206ENST00000497089 ENAHQ8N8S7 591 aaPredicted RBP7.45□□□□□ -1.22
HOXA9-206ENST00000497089 RNF214Q8ND24 703 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms