RNA–Protein interactions for RNA: ENST00000496340.1

NEPRO-224, Transcript of nucleolus and neural progenitor protein, humanhuman

TSL 4

Gene NEPRO, Length 520 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEPRO-224ENST00000496340 LPPQ93052 612 aa12.15□□□□□ -0.46
NEPRO-224ENST00000496340 POLR3CQ9BUI4 534 aaPredicted RBP12.15□□□□□ -0.46
NEPRO-224ENST00000496340 ALG13Q9NP73 1137 aaKnown RBP12.15□□□□□ -0.46
NEPRO-224ENST00000496340 FOXD4L1Q9NU39 408 aa12.15□□□□□ -0.46
NEPRO-224ENST00000496340 TYW1Q9NV66 732 aaKnown RBP12.15□□□□□ -0.46
NEPRO-224ENST00000496340 COL4A3BPQ9Y5P4 624 aa12.15□□□□□ -0.46
NEPRO-224ENST00000496340 PLXNA4Q9HCM2 1894 aa12.14□□□□□ -0.47
NEPRO-224ENST00000496340 A0A0U1RQF3 1178 aa12.14□□□□□ -0.47
NEPRO-224ENST00000496340 TBKBP1A7MCY6 615 aa12.14□□□□□ -0.47
NEPRO-224ENST00000496340 B4GALT3O60512 393 aa12.14□□□□□ -0.47
NEPRO-224ENST00000496340 CSPG5O95196 566 aa12.14□□□□□ -0.47
NEPRO-224ENST00000496340 EDN1P05305 212 aa12.14□□□□□ -0.47
NEPRO-224ENST00000496340 ITGB1P05556 798 aa12.14□□□□□ -0.47
NEPRO-224ENST00000496340 RPA1P27694 616 aa12.14□□□□□ -0.47
NEPRO-224ENST00000496340 CTNNB1P35222 781 aa12.14□□□□□ -0.47
NEPRO-224ENST00000496340 GTF2F1P35269 517 aaKnown RBP eCLIP12.14□□□□□ -0.47
NEPRO-224ENST00000496340 IRS1P35568 1242 aa12.14□□□□□ -0.47
NEPRO-224ENST00000496340 PBX3P40426 434 aa12.14□□□□□ -0.47
NEPRO-224ENST00000496340 RFC5P40937 340 aa12.14□□□□□ -0.47
NEPRO-224ENST00000496340 TRAPPC10P48553 1259 aa12.14□□□□□ -0.47
NEPRO-224ENST00000496340 FXR2P51116 673 aaKnown RBP eCLIP12.14□□□□□ -0.47
NEPRO-224ENST00000496340 KCNQ1P51787 676 aa12.14□□□□□ -0.47
NEPRO-224ENST00000496340 GRIN1Q05586 938 aa12.14□□□□□ -0.47
NEPRO-224ENST00000496340 CAPSQ13938 189 aa12.14□□□□□ -0.47
NEPRO-224ENST00000496340 AMHR2Q16671 573 aa12.14□□□□□ -0.47
NEPRO-224ENST00000496340 MAEAQ7L5Y9 396 aa12.14□□□□□ -0.47
NEPRO-224ENST00000496340 CMTR2Q8IYT2 770 aaKnown RBP12.14□□□□□ -0.47
NEPRO-224ENST00000496340 IGSF22Q8N9C0 903 aa12.14□□□□□ -0.47
NEPRO-224ENST00000496340 SPPL3Q8TCT6 385 aa12.14□□□□□ -0.47
NEPRO-224ENST00000496340 SLC7A3Q8WY07 619 aa12.14□□□□□ -0.47
NEPRO-224ENST00000496340 GCOM2Q9BZD3 368 aaPredicted RBP12.14□□□□□ -0.47
NEPRO-224ENST00000496340 C1orf112Q9NSG2 853 aa12.14□□□□□ -0.47
NEPRO-224ENST00000496340 ANKEF1Q9NU02 776 aa12.14□□□□□ -0.47
NEPRO-224ENST00000496340 TMEM161AQ9NX61 479 aa12.14□□□□□ -0.47
NEPRO-224ENST00000496340 PLAGL2Q9UPG8 496 aa12.14□□□□□ -0.47
NEPRO-224ENST00000496340 SMC3Q9UQE7 1217 aa12.14□□□□□ -0.47
NEPRO-224ENST00000496340 USP20Q9Y2K6 914 aa12.14□□□□□ -0.47
NEPRO-224ENST00000496340 PCDHB7Q9Y5E2 793 aa12.14□□□□□ -0.47
NEPRO-224ENST00000496340 CUL9Q8IWT3 2517 aa12.14□□□□□ -0.47
NEPRO-224ENST00000496340 TTC28Q96AY4 2481 aa12.13□□□□□ -0.47
NEPRO-224ENST00000496340 DLL1O00548 723 aa12.13□□□□□ -0.47
NEPRO-224ENST00000496340 USO1O60763 962 aaKnown RBP12.13□□□□□ -0.47
NEPRO-224ENST00000496340 PHKA2P46019 1235 aa12.13□□□□□ -0.47
NEPRO-224ENST00000496340 MCM2P49736 904 aa12.13□□□□□ -0.47
NEPRO-224ENST00000496340 DNM2P50570 870 aa12.13□□□□□ -0.47
NEPRO-224ENST00000496340 TCEAL5Q5H9L2 206 aa12.13□□□□□ -0.47
NEPRO-224ENST00000496340 LARP1BQ659C4 914 aaKnown RBP12.13□□□□□ -0.47
NEPRO-224ENST00000496340 FAM173BQ6P4H8 233 aa12.13□□□□□ -0.47
NEPRO-224ENST00000496340 OTUD6AQ7L8S5 288 aa12.13□□□□□ -0.47
NEPRO-224ENST00000496340 ZNF410Q86VK4 478 aa12.13□□□□□ -0.47
NEPRO-224ENST00000496340 KLHL23Q8NBE8 558 aa12.13□□□□□ -0.47
NEPRO-224ENST00000496340 RNF149Q8NC42 400 aa12.13□□□□□ -0.47
NEPRO-224ENST00000496340 PSPC1Q8WXF1 523 aaKnown RBP12.13□□□□□ -0.47
NEPRO-224ENST00000496340 MRPL38Q96DV4 380 aaKnown RBP12.13□□□□□ -0.47
NEPRO-224ENST00000496340 SCLT1Q96NL6 688 aa12.13□□□□□ -0.47
NEPRO-224ENST00000496340 MTRQ99707 1265 aa12.13□□□□□ -0.47
NEPRO-224ENST00000496340 TUFT1Q9NNX1 390 aa12.13□□□□□ -0.47
NEPRO-224ENST00000496340 TCF20Q9UGU0 1960 aaKnown RBP12.12□□□□□ -0.47
NEPRO-224ENST00000496340 E9PMD0 336 aa12.12□□□□□ -0.47
NEPRO-224ENST00000496340 B4GALT5O43286 388 aa12.12□□□□□ -0.47
NEPRO-224ENST00000496340 GTPBP6O43824 516 aaPredicted RBP12.12□□□□□ -0.47
NEPRO-224ENST00000496340 DKC1O60832 514 aaKnown RBP eCLIP12.12□□□□□ -0.47
NEPRO-224ENST00000496340 STAG3L1P0CL83 205 aa12.12□□□□□ -0.47
NEPRO-224ENST00000496340 XRCC6P12956 609 aaKnown RBP eCLIP12.12□□□□□ -0.47
NEPRO-224ENST00000496340 BMP1P13497 986 aa12.12□□□□□ -0.47
NEPRO-224ENST00000496340 PTENP60484 403 aa12.12□□□□□ -0.47
NEPRO-224ENST00000496340 ATP2C1P98194 919 aaPredicted RBP12.12□□□□□ -0.47
NEPRO-224ENST00000496340 MBTD1Q05BQ5 628 aa12.12□□□□□ -0.47
NEPRO-224ENST00000496340 ORC2Q13416 577 aaPredicted RBP12.12□□□□□ -0.47
NEPRO-224ENST00000496340 GNL2Q13823 731 aaKnown RBP12.12□□□□□ -0.47
NEPRO-224ENST00000496340 ADGRD2Q7Z7M1 963 aa12.12□□□□□ -0.47
NEPRO-224ENST00000496340 RNF169Q8NCN4 708 aa12.12□□□□□ -0.47
NEPRO-224ENST00000496340 NEK9Q8TD19 979 aa12.12□□□□□ -0.47
NEPRO-224ENST00000496340 HELQQ8TDG4 1101 aa12.12□□□□□ -0.47
NEPRO-224ENST00000496340 CPB2Q96IY4 423 aa12.12□□□□□ -0.47
NEPRO-224ENST00000496340 NECAB3Q96P71 396 aaPredicted RBP12.12□□□□□ -0.47
NEPRO-224ENST00000496340 PNMA5Q96PV4 448 aa12.12□□□□□ -0.47
NEPRO-224ENST00000496340 POLR3FQ9H1D9 316 aaPredicted RBP12.12□□□□□ -0.47
NEPRO-224ENST00000496340 RNF39Q9H2S5 420 aa12.12□□□□□ -0.47
NEPRO-224ENST00000496340 ELAC1Q9H777 363 aaKnown RBP12.12□□□□□ -0.47
NEPRO-224ENST00000496340 ATP6V0A4Q9HBG4 840 aa12.12□□□□□ -0.47
NEPRO-224ENST00000496340 AGPAT5Q9NUQ2 364 aa12.12□□□□□ -0.47
NEPRO-224ENST00000496340 LMCD1Q9NZU5 365 aa12.12□□□□□ -0.47
NEPRO-224ENST00000496340 LRWD1Q9UFC0 647 aa12.12□□□□□ -0.47
NEPRO-224ENST00000496340 DBR1Q9UK59 544 aaKnown RBP12.12□□□□□ -0.47
NEPRO-224ENST00000496340 LRFN2Q9ULH4 789 aa12.12□□□□□ -0.47
NEPRO-224ENST00000496340 KIAA1024Q9UPX6 916 aa12.12□□□□□ -0.47
NEPRO-224ENST00000496340 PIN4Q9Y237 131 aaKnown RBP12.12□□□□□ -0.47
NEPRO-224ENST00000496340 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.11□□□□□ -0.47
NEPRO-224ENST00000496340 TSPAN1O60635 241 aa12.11□□□□□ -0.47
NEPRO-224ENST00000496340 DGAT1O75907 488 aa12.11□□□□□ -0.47
NEPRO-224ENST00000496340 ZSCAN20P17040 1043 aaPredicted RBP12.11□□□□□ -0.47
NEPRO-224ENST00000496340 LTBRP36941 435 aa12.11□□□□□ -0.47
NEPRO-224ENST00000496340 CCT6AP40227 531 aaKnown RBP12.11□□□□□ -0.47
NEPRO-224ENST00000496340 DLX2Q07687 328 aaPredicted RBP12.11□□□□□ -0.47
NEPRO-224ENST00000496340 PDIA5Q14554 519 aa12.11□□□□□ -0.47
NEPRO-224ENST00000496340 PADI6Q6TGC4 694 aa12.11□□□□□ -0.47
NEPRO-224ENST00000496340 AGMOQ6ZNB7 445 aa12.11□□□□□ -0.47
NEPRO-224ENST00000496340 CATSPER4Q7RTX7 472 aa12.11□□□□□ -0.47
NEPRO-224ENST00000496340 TMEM173Q86WV6 379 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms