RNA–Protein interactions for RNA: ENST00000491282.5

SOX2-OT-212, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 882 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-212ENST00000491282 SRGAP2CP0DJJ0 459 aa12.77□□□□□ -0.37
SOX2-OT-212ENST00000491282 SPATA31C1P0DKV0 1188 aa12.77□□□□□ -0.37
SOX2-OT-212ENST00000491282 POU3F3P20264 500 aaPredicted RBP12.77□□□□□ -0.37
SOX2-OT-212ENST00000491282 RFC5P40937 340 aa12.77□□□□□ -0.37
SOX2-OT-212ENST00000491282 EMC2Q15006 297 aa12.77□□□□□ -0.37
SOX2-OT-212ENST00000491282 FAM102BQ5T8I3 360 aa12.77□□□□□ -0.37
SOX2-OT-212ENST00000491282 CATSPER3Q86XQ3 398 aa12.77□□□□□ -0.37
SOX2-OT-212ENST00000491282 ZNF710Q8N1W2 664 aa12.77□□□□□ -0.37
SOX2-OT-212ENST00000491282 NEK9Q8TD19 979 aa12.77□□□□□ -0.37
SOX2-OT-212ENST00000491282 PRPF31Q8WWY3 499 aaKnown RBP12.77□□□□□ -0.37
SOX2-OT-212ENST00000491282 ZNF689Q96CS4 500 aaPredicted RBP12.77□□□□□ -0.37
SOX2-OT-212ENST00000491282 GCOM2Q9BZD3 368 aaPredicted RBP12.77□□□□□ -0.37
SOX2-OT-212ENST00000491282 RC3H2Q9HBD1 1191 aaKnown RBP12.77□□□□□ -0.37
SOX2-OT-212ENST00000491282 C1orf112Q9NSG2 853 aa12.77□□□□□ -0.37
SOX2-OT-212ENST00000491282 ADGRA3Q8IWK6 1321 aa12.77□□□□□ -0.37
SOX2-OT-212ENST00000491282 CDH23Q9H251 3354 aa12.76□□□□□ -0.37
SOX2-OT-212ENST00000491282 MED24O75448 989 aa12.76□□□□□ -0.37
SOX2-OT-212ENST00000491282 LINC00271P0C7V0 271 aa12.76□□□□□ -0.37
SOX2-OT-212ENST00000491282 ZSCAN20P17040 1043 aaPredicted RBP12.76□□□□□ -0.37
SOX2-OT-212ENST00000491282 FAM189BP81408 668 aa12.76□□□□□ -0.37
SOX2-OT-212ENST00000491282 CDC42EP1Q00587 391 aa12.76□□□□□ -0.37
SOX2-OT-212ENST00000491282 PTGDRQ13258 359 aa12.76□□□□□ -0.37
SOX2-OT-212ENST00000491282 ORC2Q13416 577 aaPredicted RBP12.76□□□□□ -0.37
SOX2-OT-212ENST00000491282 GPM6BQ13491 265 aa12.76□□□□□ -0.37
SOX2-OT-212ENST00000491282 CUL4AQ13619 759 aa12.76□□□□□ -0.37
SOX2-OT-212ENST00000491282 SKIV2LQ15477 1246 aaKnown RBP12.76□□□□□ -0.37
SOX2-OT-212ENST00000491282 LARP1BQ659C4 914 aaKnown RBP12.76□□□□□ -0.37
SOX2-OT-212ENST00000491282 XPNPEP1Q9NQW7 623 aa12.76□□□□□ -0.37
SOX2-OT-212ENST00000491282 ANKEF1Q9NU02 776 aa12.76□□□□□ -0.37
SOX2-OT-212ENST00000491282 PPME1Q9Y570 386 aa12.76□□□□□ -0.37
SOX2-OT-212ENST00000491282 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.76□□□□□ -0.37
SOX2-OT-212ENST00000491282 COL4A3BPQ9Y5P4 624 aa12.76□□□□□ -0.37
SOX2-OT-212ENST00000491282 MRPL42Q9Y6G3 142 aaKnown RBP12.76□□□□□ -0.37
SOX2-OT-212ENST00000491282 WDR81Q562E7 1941 aa12.76□□□□□ -0.37
SOX2-OT-212ENST00000491282 FGFR1P11362 822 aa12.75□□□□□ -0.37
SOX2-OT-212ENST00000491282 CTNNB1P35222 781 aa12.75□□□□□ -0.37
SOX2-OT-212ENST00000491282 BMPR1AP36894 532 aa12.75□□□□□ -0.37
SOX2-OT-212ENST00000491282 RARRES1P49788 294 aa12.75□□□□□ -0.37
SOX2-OT-212ENST00000491282 TTC3P53804 2025 aa12.75□□□□□ -0.37
SOX2-OT-212ENST00000491282 LAMTOR4Q0VGL1 99 aa12.75□□□□□ -0.37
SOX2-OT-212ENST00000491282 ZNF410Q86VK4 478 aa12.75□□□□□ -0.37
SOX2-OT-212ENST00000491282 EXOC8Q8IYI6 725 aa12.75□□□□□ -0.37
SOX2-OT-212ENST00000491282 CMTR2Q8IYT2 770 aaKnown RBP12.75□□□□□ -0.37
SOX2-OT-212ENST00000491282 RNF169Q8NCN4 708 aa12.75□□□□□ -0.37
SOX2-OT-212ENST00000491282 ERMNQ8TAM6 284 aa12.75□□□□□ -0.37
SOX2-OT-212ENST00000491282 PSPC1Q8WXF1 523 aaKnown RBP12.75□□□□□ -0.37
SOX2-OT-212ENST00000491282 CCDC43Q96MW1 224 aaKnown RBP12.75□□□□□ -0.37
SOX2-OT-212ENST00000491282 SAMD11Q96NU1 681 aa12.75□□□□□ -0.37
SOX2-OT-212ENST00000491282 MTRQ99707 1265 aa12.75□□□□□ -0.37
SOX2-OT-212ENST00000491282 OCEL1Q9H607 264 aa12.75□□□□□ -0.37
SOX2-OT-212ENST00000491282 ATP6V0A4Q9HBG4 840 aa12.75□□□□□ -0.37
SOX2-OT-212ENST00000491282 IFT122Q9HBG6 1241 aa12.75□□□□□ -0.37
SOX2-OT-212ENST00000491282 PRRC2BQ5JSZ5 2229 aaKnown RBP12.74□□□□□ -0.37
SOX2-OT-212ENST00000491282 LOXHD1Q8IVV2 1947 aa12.74□□□□□ -0.37
SOX2-OT-212ENST00000491282 TBKBP1A7MCY6 615 aa12.74□□□□□ -0.37
SOX2-OT-212ENST00000491282 H3BNC9 293 aa12.74□□□□□ -0.37
SOX2-OT-212ENST00000491282 IL17AQ16552 155 aa12.74□□□□□ -0.37
SOX2-OT-212ENST00000491282 POTEGQ6S5H5 508 aa12.74□□□□□ -0.37
SOX2-OT-212ENST00000491282 FAM43BQ6ZT52 329 aaPredicted RBP12.74□□□□□ -0.37
SOX2-OT-212ENST00000491282 MAEAQ7L5Y9 396 aa12.74□□□□□ -0.37
SOX2-OT-212ENST00000491282 CATSPER4Q7RTX7 472 aa12.74□□□□□ -0.37
SOX2-OT-212ENST00000491282 FERMT3Q86UX7 667 aa12.74□□□□□ -0.37
SOX2-OT-212ENST00000491282 TCP11Q8WWU5 503 aa12.74□□□□□ -0.37
SOX2-OT-212ENST00000491282 POLR3CQ9BUI4 534 aaPredicted RBP12.74□□□□□ -0.37
SOX2-OT-212ENST00000491282 MINDY3Q9H8M7 445 aa12.74□□□□□ -0.37
SOX2-OT-212ENST00000491282 TUFT1Q9NNX1 390 aa12.74□□□□□ -0.37
SOX2-OT-212ENST00000491282 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.74□□□□□ -0.37
SOX2-OT-212ENST00000491282 TMEM161AQ9NX61 479 aa12.74□□□□□ -0.37
SOX2-OT-212ENST00000491282 HCSTQ9UBK5 93 aa12.74□□□□□ -0.37
SOX2-OT-212ENST00000491282 LRWD1Q9UFC0 647 aa12.74□□□□□ -0.37
SOX2-OT-212ENST00000491282 PP2D1A8MPX8 630 aa12.73□□□□□ -0.37
SOX2-OT-212ENST00000491282 GRM6O15303 877 aa12.73□□□□□ -0.37
SOX2-OT-212ENST00000491282 USO1O60763 962 aaKnown RBP12.73□□□□□ -0.37
SOX2-OT-212ENST00000491282 GABBR2O75899 941 aa12.73□□□□□ -0.37
SOX2-OT-212ENST00000491282 DGAT1O75907 488 aa12.73□□□□□ -0.37
SOX2-OT-212ENST00000491282 CSPG5O95196 566 aa12.73□□□□□ -0.37
SOX2-OT-212ENST00000491282 XRCC6P12956 609 aaKnown RBP eCLIP12.73□□□□□ -0.37
SOX2-OT-212ENST00000491282 SFPQP23246 707 aaKnown RBP eCLIP12.73□□□□□ -0.37
SOX2-OT-212ENST00000491282 ARL2P36404 184 aa12.73□□□□□ -0.37
SOX2-OT-212ENST00000491282 CCT6AP40227 531 aaKnown RBP12.73□□□□□ -0.37
SOX2-OT-212ENST00000491282 ECM1Q16610 540 aa12.73□□□□□ -0.37
SOX2-OT-212ENST00000491282 LONRF3Q496Y0 759 aa12.73□□□□□ -0.37
SOX2-OT-212ENST00000491282 RILPL1Q5EBL4 403 aa12.73□□□□□ -0.37
SOX2-OT-212ENST00000491282 ECHDC2Q86YB7 292 aa12.73□□□□□ -0.37
SOX2-OT-212ENST00000491282 RNF149Q8NC42 400 aa12.73□□□□□ -0.37
SOX2-OT-212ENST00000491282 ASAP3Q8TDY4 903 aa12.73□□□□□ -0.37
SOX2-OT-212ENST00000491282 CLP1Q92989 425 aaKnown RBP12.73□□□□□ -0.37
SOX2-OT-212ENST00000491282 SNX21Q969T3 373 aa12.73□□□□□ -0.37
SOX2-OT-212ENST00000491282 NACC1Q96RE7 527 aa12.73□□□□□ -0.37
SOX2-OT-212ENST00000491282 INO80BQ9C086 356 aaPredicted RBP12.73□□□□□ -0.37
SOX2-OT-212ENST00000491282 ELAC1Q9H777 363 aaKnown RBP12.73□□□□□ -0.37
SOX2-OT-212ENST00000491282 ALG13Q9NP73 1137 aaKnown RBP12.73□□□□□ -0.37
SOX2-OT-212ENST00000491282 GPRC5CQ9NQ84 441 aa12.73□□□□□ -0.37
SOX2-OT-212ENST00000491282 RNF19AQ9NV58 838 aa12.73□□□□□ -0.37
SOX2-OT-212ENST00000491282 LMCD1Q9NZU5 365 aa12.73□□□□□ -0.37
SOX2-OT-212ENST00000491282 PIN4Q9Y237 131 aaKnown RBP12.73□□□□□ -0.37
SOX2-OT-212ENST00000491282 A0A0U1RQF3 1178 aa12.72□□□□□ -0.37
SOX2-OT-212ENST00000491282 VPS37CA5D8V6 355 aaPredicted RBP12.72□□□□□ -0.37
SOX2-OT-212ENST00000491282 C5orf67F2Z3F1 127 aa12.72□□□□□ -0.37
SOX2-OT-212ENST00000491282 ASAP2O43150 1006 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms