RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 ABCB11O95342 1321 aa12.1□□□□□ -0.47
CRNKL1-204ENST00000490910 KRT16P08779 473 aa12.09□□□□□ -0.47
CRNKL1-204ENST00000490910 PLA2G4BP0C869 781 aa12.09□□□□□ -0.47
CRNKL1-204ENST00000490910 STAT4Q14765 748 aa12.09□□□□□ -0.47
CRNKL1-204ENST00000490910 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.09□□□□□ -0.47
CRNKL1-204ENST00000490910 EZH1Q92800 747 aaPredicted RBP12.09□□□□□ -0.47
CRNKL1-204ENST00000490910 GORASP1Q9BQQ3 440 aa12.09□□□□□ -0.47
CRNKL1-204ENST00000490910 NAGPAQ9UK23 515 aa12.09□□□□□ -0.47
CRNKL1-204ENST00000490910 TRAF3IP3Q9Y228 551 aa12.09□□□□□ -0.47
CRNKL1-204ENST00000490910 SLC4A7Q9Y6M7 1214 aa12.09□□□□□ -0.47
CRNKL1-204ENST00000490910 ANKRD26Q9UPS8 1709 aa12.09□□□□□ -0.47
CRNKL1-204ENST00000490910 PPIP5K2O43314 1243 aa12.09□□□□□ -0.47
CRNKL1-204ENST00000490910 MT-ND3P03897 115 aa12.09□□□□□ -0.47
CRNKL1-204ENST00000490910 FESP07332 822 aa12.09□□□□□ -0.47
CRNKL1-204ENST00000490910 UCHL3P15374 230 aa12.09□□□□□ -0.47
CRNKL1-204ENST00000490910 TPP2P29144 1249 aaPredicted RBP12.09□□□□□ -0.47
CRNKL1-204ENST00000490910 PABPC4Q13310 644 aaKnown RBP eCLIP12.09□□□□□ -0.47
CRNKL1-204ENST00000490910 WASHC2DQ5SRD0 308 aa12.09□□□□□ -0.47
CRNKL1-204ENST00000490910 SLC35G2Q8TBE7 412 aa12.09□□□□□ -0.47
CRNKL1-204ENST00000490910 SEMA4AQ9H3S1 761 aa12.09□□□□□ -0.47
CRNKL1-204ENST00000490910 UBN1Q9NPG3 1134 aa12.09□□□□□ -0.47
CRNKL1-204ENST00000490910 CES2O00748 559 aa12.09□□□□□ -0.47
CRNKL1-204ENST00000490910 ATF7P17544 494 aaPredicted RBP12.09□□□□□ -0.47
CRNKL1-204ENST00000490910 ATP6V1C1P21283 382 aa12.09□□□□□ -0.47
CRNKL1-204ENST00000490910 LTKP29376 864 aa12.09□□□□□ -0.47
CRNKL1-204ENST00000490910 MAPK4P31152 587 aa12.09□□□□□ -0.47
CRNKL1-204ENST00000490910 SNX30Q5VWJ9 437 aa12.09□□□□□ -0.47
CRNKL1-204ENST00000490910 TRIM42Q8IWZ5 723 aa12.09□□□□□ -0.47
CRNKL1-204ENST00000490910 PPM1KQ8N3J5 372 aa12.09□□□□□ -0.47
CRNKL1-204ENST00000490910 CNBD1Q8NA66 436 aa12.09□□□□□ -0.47
CRNKL1-204ENST00000490910 HIPK4Q8NE63 616 aa12.09□□□□□ -0.47
CRNKL1-204ENST00000490910 GLT8D2Q9H1C3 349 aa12.09□□□□□ -0.47
CRNKL1-204ENST00000490910 EHMT1Q9H9B1 1298 aa12.09□□□□□ -0.47
CRNKL1-204ENST00000490910 NPHS2Q9NP85 383 aa12.09□□□□□ -0.47
CRNKL1-204ENST00000490910 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.09□□□□□ -0.477e-7■■■■□ 21.8
CRNKL1-204ENST00000490910 CNOT8Q9UFF9 292 aaKnown RBP12.09□□□□□ -0.47
CRNKL1-204ENST00000490910 STK24Q9Y6E0 443 aa12.09□□□□□ -0.47
CRNKL1-204ENST00000490910 ACTN1P12814 892 aa12.08□□□□□ -0.47
CRNKL1-204ENST00000490910 RARGP13631 454 aa12.08□□□□□ -0.47
CRNKL1-204ENST00000490910 GCLCP48506 637 aaPredicted RBP12.08□□□□□ -0.47
CRNKL1-204ENST00000490910 PEX5P50542 639 aa12.08□□□□□ -0.47
CRNKL1-204ENST00000490910 CYLC2Q14093 348 aaPredicted RBP12.08□□□□□ -0.47
CRNKL1-204ENST00000490910 KYNUQ16719 465 aa12.08□□□□□ -0.47
CRNKL1-204ENST00000490910 ZCWPW2Q504Y3 356 aa12.08□□□□□ -0.47
CRNKL1-204ENST00000490910 EARS2Q5JPH6 523 aaKnown RBP12.08□□□□□ -0.47
CRNKL1-204ENST00000490910 LCA5Q86VQ0 697 aa12.08□□□□□ -0.47
CRNKL1-204ENST00000490910 TRIM59Q8IWR1 403 aa12.08□□□□□ -0.47
CRNKL1-204ENST00000490910 SNF8Q96H20 258 aa12.08□□□□□ -0.47
CRNKL1-204ENST00000490910 CYP39A1Q9NYL5 469 aa12.08□□□□□ -0.47
CRNKL1-204ENST00000490910 ABLIM1O14639 778 aa12.08□□□□□ -0.48
CRNKL1-204ENST00000490910 ZBTB17Q13105 803 aa12.08□□□□□ -0.48
CRNKL1-204ENST00000490910 TMEM132AQ24JP5 1023 aa12.08□□□□□ -0.48
CRNKL1-204ENST00000490910 MAGEB18Q96M61 343 aa12.08□□□□□ -0.48
CRNKL1-204ENST00000490910 MXD3Q9BW11 206 aa12.08□□□□□ -0.48
CRNKL1-204ENST00000490910 NUF2Q9BZD4 464 aa12.08□□□□□ -0.48
CRNKL1-204ENST00000490910 TSPYL2Q9H2G4 693 aaPredicted RBP12.08□□□□□ -0.48
CRNKL1-204ENST00000490910 TRABDQ9H4I3 376 aa12.08□□□□□ -0.48
CRNKL1-204ENST00000490910 PCDHGC5Q9Y5F6 944 aa12.08□□□□□ -0.48
CRNKL1-204ENST00000490910 MYMKA6NI61 221 aa12.08□□□□□ -0.48
CRNKL1-204ENST00000490910 NMT2O60551 498 aa12.08□□□□□ -0.48
CRNKL1-204ENST00000490910 SMNDC1O75940 238 aaKnown RBP eCLIP12.08□□□□□ -0.48
CRNKL1-204ENST00000490910 INHBAP08476 426 aa12.08□□□□□ -0.48
CRNKL1-204ENST00000490910 GPC5P78333 572 aa12.08□□□□□ -0.48
CRNKL1-204ENST00000490910 KRT17Q04695 432 aa12.08□□□□□ -0.48
CRNKL1-204ENST00000490910 ZNF268Q14587 947 aaPredicted RBP12.08□□□□□ -0.48
CRNKL1-204ENST00000490910 PSMD6Q15008 389 aa12.08□□□□□ -0.48
CRNKL1-204ENST00000490910 CENPPQ6IPU0 288 aa12.08□□□□□ -0.48
CRNKL1-204ENST00000490910 C6orf89Q6UWU4 347 aa12.08□□□□□ -0.48
CRNKL1-204ENST00000490910 VTI1AQ96AJ9 217 aa12.08□□□□□ -0.48
CRNKL1-204ENST00000490910 INPP4AQ96PE3 977 aaPredicted RBP12.08□□□□□ -0.48
CRNKL1-204ENST00000490910 EBF2Q9HAK2 575 aa12.08□□□□□ -0.48
CRNKL1-204ENST00000490910 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.08□□□□□ -0.48
CRNKL1-204ENST00000490910 SENP1Q9P0U3 644 aa12.08□□□□□ -0.48
CRNKL1-204ENST00000490910 TXNDC16Q9P2K2 825 aa12.08□□□□□ -0.48
CRNKL1-204ENST00000490910 CNOT7Q9UIV1 285 aaKnown RBP12.08□□□□□ -0.48
CRNKL1-204ENST00000490910 CHMP2BQ9UQN3 213 aa12.08□□□□□ -0.48
CRNKL1-204ENST00000490910 HIBADHP31937 336 aaKnown RBP12.08□□□□□ -0.48
CRNKL1-204ENST00000490910 MAP7D1Q3KQU3 841 aa12.08□□□□□ -0.48
CRNKL1-204ENST00000490910 GRAMD4Q6IC98 578 aa12.08□□□□□ -0.48
CRNKL1-204ENST00000490910 RGS9BPQ6ZS82 235 aa12.08□□□□□ -0.48
CRNKL1-204ENST00000490910 SNRNP27Q8WVK2 155 aaKnown RBP12.08□□□□□ -0.48
CRNKL1-204ENST00000490910 GFM2Q969S9 779 aaKnown RBP12.08□□□□□ -0.48
CRNKL1-204ENST00000490910 NLRP3Q96P20 1036 aa12.08□□□□□ -0.48
CRNKL1-204ENST00000490910 PURBQ96QR8 312 aaKnown RBP12.08□□□□□ -0.48
CRNKL1-204ENST00000490910 FAM192AQ9GZU8 254 aa12.08□□□□□ -0.48
CRNKL1-204ENST00000490910 TMOD2Q9NZR1 351 aa12.08□□□□□ -0.48
CRNKL1-204ENST00000490910 SMG5Q9UPR3 1016 aaKnown RBP12.08□□□□□ -0.48
CRNKL1-204ENST00000490910 DPPA5A6NC42 116 aa12.07□□□□□ -0.48
CRNKL1-204ENST00000490910 CHMP2AO43633 222 aa12.07□□□□□ -0.48
CRNKL1-204ENST00000490910 DKC1O60832 514 aaKnown RBP eCLIP12.07□□□□□ -0.48
CRNKL1-204ENST00000490910 TMCC1O94876 653 aa12.07□□□□□ -0.48
CRNKL1-204ENST00000490910 EIF6P56537 245 aaKnown RBP12.07□□□□□ -0.48
CRNKL1-204ENST00000490910 TRPC3Q13507 836 aa12.07□□□□□ -0.48
CRNKL1-204ENST00000490910 KAZNQ674X7 775 aa12.07□□□□□ -0.48
CRNKL1-204ENST00000490910 TRIML2Q8N7C3 387 aa12.07□□□□□ -0.48
CRNKL1-204ENST00000490910 CABLES1Q8TDN4 633 aa12.07□□□□□ -0.48
CRNKL1-204ENST00000490910 TTC17Q96AE7 1141 aa12.07□□□□□ -0.48
CRNKL1-204ENST00000490910 TSNARE1Q96NA8 513 aa12.07□□□□□ -0.48
CRNKL1-204ENST00000490910 TRAPPC9Q96Q05 1148 aa12.07□□□□□ -0.48
CRNKL1-204ENST00000490910 EYA3Q99504 573 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms