RNA–Protein interactions for RNA: ENST00000490808.1

HDAC3-210, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 605 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-210ENST00000490808 CCZ1BP86790 482 aa11.27□□□□□ -0.61
HDAC3-210ENST00000490808 CCZ1P86791 482 aaPredicted RBP11.27□□□□□ -0.61
HDAC3-210ENST00000490808 LRMPQ12912 555 aa11.27□□□□□ -0.61
HDAC3-210ENST00000490808 MYBPC2Q14324 1141 aa11.27□□□□□ -0.61
HDAC3-210ENST00000490808 LRRC41Q15345 812 aa11.27□□□□□ -0.61
HDAC3-210ENST00000490808 XKR3Q5GH77 459 aa11.27□□□□□ -0.61
HDAC3-210ENST00000490808 LHX8Q68G74 356 aa11.27□□□□□ -0.61
HDAC3-210ENST00000490808 TAPT1Q6NXT6 567 aa11.27□□□□□ -0.61
HDAC3-210ENST00000490808 EPM2AIP1Q7L775 607 aaPredicted RBP11.27□□□□□ -0.61
HDAC3-210ENST00000490808 FRMD5Q7Z6J6 570 aa11.27□□□□□ -0.61
HDAC3-210ENST00000490808 IRF2BP1Q8IU81 584 aa11.27□□□□□ -0.61
HDAC3-210ENST00000490808 TMTC1Q8IUR5 882 aa11.27□□□□□ -0.61
HDAC3-210ENST00000490808 NELFCDQ8IXH7 590 aa11.27□□□□□ -0.61
HDAC3-210ENST00000490808 SYCP3Q8IZU3 236 aa11.27□□□□□ -0.61
HDAC3-210ENST00000490808 TRPV1Q8NER1 839 aa11.27□□□□□ -0.61
HDAC3-210ENST00000490808 SCFD1Q8WVM8 642 aa11.27□□□□□ -0.61
HDAC3-210ENST00000490808 KIFAP3Q92845 792 aa11.27□□□□□ -0.61
HDAC3-210ENST00000490808 ERGIC2Q96RQ1 377 aa11.27□□□□□ -0.61
HDAC3-210ENST00000490808 RUSC1Q9BVN2 902 aa11.27□□□□□ -0.61
HDAC3-210ENST00000490808 NUCKS1Q9H1E3 243 aaKnown RBP11.27□□□□□ -0.61
HDAC3-210ENST00000490808 PRO3102Q9H379 93 aa11.27□□□□□ -0.61
HDAC3-210ENST00000490808 TMX1Q9H3N1 280 aa11.27□□□□□ -0.61
HDAC3-210ENST00000490808 NDST4Q9H3R1 872 aa11.27□□□□□ -0.61
HDAC3-210ENST00000490808 XPNPEP3Q9NQH7 507 aa11.27□□□□□ -0.61
HDAC3-210ENST00000490808 NRBP2Q9NSY0 501 aa11.27□□□□□ -0.61
HDAC3-210ENST00000490808 INTS13Q9NVM9 706 aa11.27□□□□□ -0.61
HDAC3-210ENST00000490808 GNEQ9Y223 722 aaKnown RBP11.27□□□□□ -0.61
HDAC3-210ENST00000490808 SLC16A3O15427 465 aaKnown RBP11.26□□□□□ -0.61
HDAC3-210ENST00000490808 ATP9AO75110 1047 aa11.26□□□□□ -0.61
HDAC3-210ENST00000490808 HIP1RO75146 1068 aa11.26□□□□□ -0.61
HDAC3-210ENST00000490808 DGAT1O75907 488 aa11.26□□□□□ -0.61
HDAC3-210ENST00000490808 GH1P01241 217 aa11.26□□□□□ -0.61
HDAC3-210ENST00000490808 SUPT20HL2P0C7V6 817 aa11.26□□□□□ -0.61
HDAC3-210ENST00000490808 PLS3P13797 630 aa11.26□□□□□ -0.61
HDAC3-210ENST00000490808 ACTR2P61160 394 aa11.26□□□□□ -0.61
HDAC3-210ENST00000490808 CACNB1Q02641 598 aaPredicted RBP11.26□□□□□ -0.61
HDAC3-210ENST00000490808 RBL2Q08999 1139 aa11.26□□□□□ -0.61
HDAC3-210ENST00000490808 TRIM32Q13049 653 aa11.26□□□□□ -0.61
HDAC3-210ENST00000490808 LAMC2Q13753 1193 aa11.26□□□□□ -0.61
HDAC3-210ENST00000490808 PTPN14Q15678 1187 aa11.26□□□□□ -0.61
HDAC3-210ENST00000490808 ZCWPW2Q504Y3 356 aa11.26□□□□□ -0.61
HDAC3-210ENST00000490808 FIGNQ5HY92 759 aa11.26□□□□□ -0.61
HDAC3-210ENST00000490808 SWSAP1Q6NVH7 229 aa11.26□□□□□ -0.61
HDAC3-210ENST00000490808 CYP26C1Q6V0L0 522 aa11.26□□□□□ -0.61
HDAC3-210ENST00000490808 SEPT14Q6ZU15 432 aa11.26□□□□□ -0.61
HDAC3-210ENST00000490808 ZNF720Q7Z2F6 126 aa11.26□□□□□ -0.61
HDAC3-210ENST00000490808 NECAB2Q7Z6G3 386 aa11.26□□□□□ -0.61
HDAC3-210ENST00000490808 FBXO16Q8IX29 292 aaPredicted RBP11.26□□□□□ -0.61
HDAC3-210ENST00000490808 OR8K1Q8NGG5 319 aa11.26□□□□□ -0.61
HDAC3-210ENST00000490808 HPS3Q969F9 1004 aa11.26□□□□□ -0.61
HDAC3-210ENST00000490808 LRCH3Q96II8 777 aa11.26□□□□□ -0.61
HDAC3-210ENST00000490808 FAM167AQ96KS9 214 aa11.26□□□□□ -0.61
HDAC3-210ENST00000490808 CEP170P1Q96L14 293 aa11.26□□□□□ -0.61
HDAC3-210ENST00000490808 IFT74Q96LB3 600 aa11.26□□□□□ -0.61
HDAC3-210ENST00000490808 ACCSQ96QU6 501 aa11.26□□□□□ -0.61
HDAC3-210ENST00000490808 MKNK1Q9BUB5 465 aa11.26□□□□□ -0.61
HDAC3-210ENST00000490808 EDEM3Q9BZQ6 932 aa11.26□□□□□ -0.61
HDAC3-210ENST00000490808 GBP3Q9H0R5 595 aa11.26□□□□□ -0.61
HDAC3-210ENST00000490808 KCTD10Q9H3F6 313 aa11.26□□□□□ -0.61
HDAC3-210ENST00000490808 ST6GALNAC4Q9H4F1 302 aa11.26□□□□□ -0.61
HDAC3-210ENST00000490808 AZI2Q9H6S1 392 aa11.26□□□□□ -0.61
HDAC3-210ENST00000490808 MLXIPQ9HAP2 919 aa11.26□□□□□ -0.61
HDAC3-210ENST00000490808 GABBR1Q9UBS5 961 aa11.26□□□□□ -0.61
HDAC3-210ENST00000490808 PYCARDQ9ULZ3 195 aa11.26□□□□□ -0.61
HDAC3-210ENST00000490808 FRMD4BQ9Y2L6 1034 aa11.26□□□□□ -0.61
HDAC3-210ENST00000490808 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.26□□□□□ -0.61
HDAC3-210ENST00000490808 NR2E3Q9Y5X4 410 aa11.26□□□□□ -0.61
HDAC3-210ENST00000490808 WDR81Q562E7 1941 aa11.25□□□□□ -0.61
HDAC3-210ENST00000490808 SCN10AQ9Y5Y9 1956 aa11.25□□□□□ -0.61
HDAC3-210ENST00000490808 A0A1W2PQJ5 194 aa11.25□□□□□ -0.61
HDAC3-210ENST00000490808 K7ENM7 598 aa11.25□□□□□ -0.61
HDAC3-210ENST00000490808 SOX1O00570 391 aaPredicted RBP11.25□□□□□ -0.61
HDAC3-210ENST00000490808 USO1O60763 962 aaKnown RBP11.25□□□□□ -0.61
HDAC3-210ENST00000490808 MFAP3LO75121 409 aa11.25□□□□□ -0.61
HDAC3-210ENST00000490808 ATG7O95352 703 aa11.25□□□□□ -0.61
HDAC3-210ENST00000490808 TXNP10599 105 aaKnown RBP11.25□□□□□ -0.61
HDAC3-210ENST00000490808 NR2F2P24468 414 aa11.25□□□□□ -0.61
HDAC3-210ENST00000490808 CASP14P31944 242 aa11.25□□□□□ -0.61
HDAC3-210ENST00000490808 ADKP55263 362 aaKnown RBP11.25□□□□□ -0.61
HDAC3-210ENST00000490808 C1orf53Q5VUE5 145 aa11.25□□□□□ -0.61
HDAC3-210ENST00000490808 CCDC62Q6P9F0 684 aa11.25□□□□□ -0.61
HDAC3-210ENST00000490808 ABHD15Q6UXT9 468 aa11.25□□□□□ -0.61
HDAC3-210ENST00000490808 TLK2Q86UE8 772 aa11.25□□□□□ -0.61
HDAC3-210ENST00000490808 FMNL3Q8IVF7 1028 aa11.25□□□□□ -0.61
HDAC3-210ENST00000490808 ZC3H3Q8IXZ2 948 aaKnown RBP11.25□□□□□ -0.61
HDAC3-210ENST00000490808 TC2NQ8N9U0 490 aa11.25□□□□□ -0.61
HDAC3-210ENST00000490808 CPLX3Q8WVH0 158 aa11.25□□□□□ -0.61
HDAC3-210ENST00000490808 SEPT1Q8WYJ6 367 aa11.25□□□□□ -0.61
HDAC3-210ENST00000490808 PURBQ96QR8 312 aaKnown RBP11.25□□□□□ -0.61
HDAC3-210ENST00000490808 JPH2Q9BR39 696 aaPredicted RBP11.25□□□□□ -0.61
HDAC3-210ENST00000490808 ZNF302Q9NR11 478 aa11.25□□□□□ -0.61
HDAC3-210ENST00000490808 ARMCX3Q9UH62 379 aaPredicted RBP11.25□□□□□ -0.61
HDAC3-210ENST00000490808 CAPN11Q9UMQ6 739 aa11.25□□□□□ -0.61
HDAC3-210ENST00000490808 COL6A3P12111 3177 aa11.24□□□□□ -0.61
HDAC3-210ENST00000490808 A0A1W2PPC1 479 aa11.24□□□□□ -0.61
HDAC3-210ENST00000490808 A6NJR5 290 aa11.24□□□□□ -0.61
HDAC3-210ENST00000490808 NOP56O00567 594 aaKnown RBP11.24□□□□□ -0.61
HDAC3-210ENST00000490808 GAS2O43903 313 aaKnown RBP11.24□□□□□ -0.61
HDAC3-210ENST00000490808 ADAMTS4O75173 837 aa11.24□□□□□ -0.61
HDAC3-210ENST00000490808 FARP2O94887 1054 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms