RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 PER2O15055 1255 aa21.78■■□□□ 1.08
TNFRSF1B-202ENST00000489921 TBX3O15119 743 aa21.78■■□□□ 1.08
TNFRSF1B-202ENST00000489921 EOMESO95936 686 aa21.78■■□□□ 1.08
TNFRSF1B-202ENST00000489921 LAG3P18627 525 aa21.78■■□□□ 1.08
TNFRSF1B-202ENST00000489921 PBX3P40426 434 aa21.78■■□□□ 1.08
TNFRSF1B-202ENST00000489921 QARSP47897 775 aaKnown RBP21.78■■□□□ 1.08
TNFRSF1B-202ENST00000489921 RBM10P98175 930 aaKnown RBP21.78■■□□□ 1.08
TNFRSF1B-202ENST00000489921 CDC42EP1Q00587 391 aa21.78■■□□□ 1.08
TNFRSF1B-202ENST00000489921 PLCB3Q01970 1234 aa21.78■■□□□ 1.08
TNFRSF1B-202ENST00000489921 ANKRD1Q15327 319 aa21.78■■□□□ 1.08
TNFRSF1B-202ENST00000489921 ERICH6BQ5W0A0 696 aa21.78■■□□□ 1.08
TNFRSF1B-202ENST00000489921 POTEDQ86YR6 584 aa21.78■■□□□ 1.08
TNFRSF1B-202ENST00000489921 THNSL1Q8IYQ7 743 aa21.78■■□□□ 1.08
TNFRSF1B-202ENST00000489921 GTF3C6Q969F1 213 aa21.78■■□□□ 1.08
TNFRSF1B-202ENST00000489921 GCOM2Q9BZD3 368 aaPredicted RBP21.78■■□□□ 1.08
TNFRSF1B-202ENST00000489921 CYP26B1Q9NR63 512 aa21.78■■□□□ 1.08
TNFRSF1B-202ENST00000489921 HOXA2O43364 376 aa21.77■■□□□ 1.08
TNFRSF1B-202ENST00000489921 SEC24BO95487 1268 aa21.77■■□□□ 1.08
TNFRSF1B-202ENST00000489921 P4HBP07237 508 aaKnown RBP21.77■■□□□ 1.08
TNFRSF1B-202ENST00000489921 XBP1P17861 261 aa21.77■■□□□ 1.08
TNFRSF1B-202ENST00000489921 NDUFV1P49821 464 aa21.77■■□□□ 1.08
TNFRSF1B-202ENST00000489921 COASYQ13057 564 aa21.77■■□□□ 1.08
TNFRSF1B-202ENST00000489921 KCNC3Q14003 757 aa21.77■■□□□ 1.08
TNFRSF1B-202ENST00000489921 CSPP1Q1MSJ5 1256 aa21.77■■□□□ 1.08
TNFRSF1B-202ENST00000489921 KCNT2Q6UVM3 1135 aa21.77■■□□□ 1.08
TNFRSF1B-202ENST00000489921 RHPN2Q8IUC4 686 aa21.77■■□□□ 1.08
TNFRSF1B-202ENST00000489921 SMRP1Q8NCR6 262 aa21.77■■□□□ 1.08
TNFRSF1B-202ENST00000489921 NSUN7Q8NE18 718 aaKnown RBP21.77■■□□□ 1.08
TNFRSF1B-202ENST00000489921 MRPS27Q92552 414 aaKnown RBP21.77■■□□□ 1.08
TNFRSF1B-202ENST00000489921 PPP2R3CQ969Q6 453 aa21.77■■□□□ 1.08
TNFRSF1B-202ENST00000489921 SCLT1Q96NL6 688 aa21.77■■□□□ 1.08
TNFRSF1B-202ENST00000489921 TRAIPQ9BWF2 469 aa21.77■■□□□ 1.08
TNFRSF1B-202ENST00000489921 IFT122Q9HBG6 1241 aa21.77■■□□□ 1.08
TNFRSF1B-202ENST00000489921 CHST12Q9NRB3 414 aa21.77■■□□□ 1.08
TNFRSF1B-202ENST00000489921 LZTS1Q9Y250 596 aa21.77■■□□□ 1.08
TNFRSF1B-202ENST00000489921 ZBTB39O15060 712 aa21.76■■□□□ 1.07
TNFRSF1B-202ENST00000489921 DNM2P50570 870 aa21.76■■□□□ 1.07
TNFRSF1B-202ENST00000489921 ST3GAL1Q11201 340 aa21.76■■□□□ 1.07
TNFRSF1B-202ENST00000489921 EPHA7Q15375 998 aa21.76■■□□□ 1.07
TNFRSF1B-202ENST00000489921 DUSP6Q16828 381 aa21.76■■□□□ 1.07
TNFRSF1B-202ENST00000489921 ZNF410Q86VK4 478 aa21.76■■□□□ 1.07
TNFRSF1B-202ENST00000489921 LRRC43Q8N309 656 aa21.76■■□□□ 1.07
TNFRSF1B-202ENST00000489921 RNF169Q8NCN4 708 aa21.76■■□□□ 1.07
TNFRSF1B-202ENST00000489921 HELQQ8TDG4 1101 aa21.76■■□□□ 1.07
TNFRSF1B-202ENST00000489921 MICAL1Q8TDZ2 1067 aa21.76■■□□□ 1.07
TNFRSF1B-202ENST00000489921 DHX33Q9H6R0 707 aaKnown RBP21.76■■□□□ 1.07
TNFRSF1B-202ENST00000489921 TLE6Q9H808 572 aa21.76■■□□□ 1.07
TNFRSF1B-202ENST00000489921 RGL1Q9NZL6 768 aa21.76■■□□□ 1.07
TNFRSF1B-202ENST00000489921 BARX2Q9UMQ3 279 aaPredicted RBP21.76■■□□□ 1.07
TNFRSF1B-202ENST00000489921 WNT7AO00755 349 aa21.75■■□□□ 1.07
TNFRSF1B-202ENST00000489921 PHKA2P46019 1235 aa21.75■■□□□ 1.07
TNFRSF1B-202ENST00000489921 C4orf19Q8IY42 314 aa21.75■■□□□ 1.07
TNFRSF1B-202ENST00000489921 DACT1Q9NYF0 836 aa21.75■■□□□ 1.07
TNFRSF1B-202ENST00000489921 MEIS3P2A8K0S8 358 aa21.74■■□□□ 1.07
TNFRSF1B-202ENST00000489921 HIDE1A8MVS5 230 aa21.74■■□□□ 1.07
TNFRSF1B-202ENST00000489921 JAK2O60674 1132 aa21.74■■□□□ 1.07
TNFRSF1B-202ENST00000489921 KRT2P35908 639 aa21.74■■□□□ 1.07
TNFRSF1B-202ENST00000489921 PDE12Q6L8Q7 609 aaKnown RBP21.74■■□□□ 1.07
TNFRSF1B-202ENST00000489921 WASF1Q92558 559 aa21.74■■□□□ 1.07
TNFRSF1B-202ENST00000489921 DYDC2Q96IM9 177 aa21.74■■□□□ 1.07
TNFRSF1B-202ENST00000489921 CEP170P1Q96L14 293 aa21.74■■□□□ 1.07
TNFRSF1B-202ENST00000489921 ZNF558Q96NG5 402 aa21.74■■□□□ 1.07
TNFRSF1B-202ENST00000489921 NAP1L4Q99733 375 aaKnown RBP21.74■■□□□ 1.07
TNFRSF1B-202ENST00000489921 LXNQ9BS40 222 aa21.74■■□□□ 1.07
TNFRSF1B-202ENST00000489921 BTBD18B2RXH4 712 aa21.73■■□□□ 1.07
TNFRSF1B-202ENST00000489921 SLITRK3O94933 977 aa21.73■■□□□ 1.07
TNFRSF1B-202ENST00000489921 ALADP13716 330 aa21.73■■□□□ 1.07
TNFRSF1B-202ENST00000489921 SFPQP23246 707 aaKnown RBP eCLIP21.73■■□□□ 1.07
TNFRSF1B-202ENST00000489921 NEK4P51957 841 aa21.73■■□□□ 1.07
TNFRSF1B-202ENST00000489921 PLPP4Q5VZY2 271 aa21.73■■□□□ 1.07
TNFRSF1B-202ENST00000489921 ABI1Q8IZP0 508 aa21.73■■□□□ 1.07
TNFRSF1B-202ENST00000489921 SLC39A11Q8N1S5 342 aa21.73■■□□□ 1.07
TNFRSF1B-202ENST00000489921 PRPF31Q8WWY3 499 aaKnown RBP21.73■■□□□ 1.07
TNFRSF1B-202ENST00000489921 LPPQ93052 612 aa21.73■■□□□ 1.07
TNFRSF1B-202ENST00000489921 TMEM143Q96AN5 459 aa21.73■■□□□ 1.07
TNFRSF1B-202ENST00000489921 NLRP4Q96MN2 994 aa21.73■■□□□ 1.07
TNFRSF1B-202ENST00000489921 INO80BQ9C086 356 aaPredicted RBP21.73■■□□□ 1.07
TNFRSF1B-202ENST00000489921 MINDY3Q9H8M7 445 aa21.73■■□□□ 1.07
TNFRSF1B-202ENST00000489921 COL4A3BPQ9Y5P4 624 aa21.73■■□□□ 1.07
TNFRSF1B-202ENST00000489921 DCXO43602 365 aa21.72■■□□□ 1.07
TNFRSF1B-202ENST00000489921 ZNF623O75123 536 aa21.72■■□□□ 1.07
TNFRSF1B-202ENST00000489921 YWHABP31946 246 aaKnown RBP21.72■■□□□ 1.07
TNFRSF1B-202ENST00000489921 CTTNQ14247 550 aaKnown RBP21.72■■□□□ 1.07
TNFRSF1B-202ENST00000489921 NCAPH2Q6IBW4 605 aa21.72■■□□□ 1.07
TNFRSF1B-202ENST00000489921 TMEM184AQ6ZMB5 413 aa21.72■■□□□ 1.07
TNFRSF1B-202ENST00000489921 CDCA3Q99618 268 aaPredicted RBP21.72■■□□□ 1.07
TNFRSF1B-202ENST00000489921 TCF25Q9BQ70 676 aa21.72■■□□□ 1.07
TNFRSF1B-202ENST00000489921 JPH2Q9BR39 696 aaPredicted RBP21.72■■□□□ 1.07
TNFRSF1B-202ENST00000489921 SPG21Q9NZD8 308 aa21.72■■□□□ 1.07
TNFRSF1B-202ENST00000489921 PIN4Q9Y237 131 aaKnown RBP21.72■■□□□ 1.07
TNFRSF1B-202ENST00000489921 PPME1Q9Y570 386 aa21.72■■□□□ 1.07
TNFRSF1B-202ENST00000489921 PRR33A8MZF0 331 aa21.71■■□□□ 1.07
TNFRSF1B-202ENST00000489921 DKC1O60832 514 aaKnown RBP eCLIP21.71■■□□□ 1.07
TNFRSF1B-202ENST00000489921 HOXA11P31270 313 aaPredicted RBP21.71■■□□□ 1.07
TNFRSF1B-202ENST00000489921 PPM1AP35813 382 aa21.71■■□□□ 1.07
TNFRSF1B-202ENST00000489921 LAMTOR4Q0VGL1 99 aa21.71■■□□□ 1.07
TNFRSF1B-202ENST00000489921 LONRF3Q496Y0 759 aa21.71■■□□□ 1.07
TNFRSF1B-202ENST00000489921 SLFN12Q8IYM2 578 aa21.71■■□□□ 1.07
TNFRSF1B-202ENST00000489921 SLC7A3Q8WY07 619 aa21.71■■□□□ 1.07
TNFRSF1B-202ENST00000489921 SUSD6Q92537 303 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms