RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-222	ENST00000489772		A0A087WWV3	80 aa		12.33	□□□□□ -0.44
GGA1-222	ENST00000489772		C9IYK1	514 aa		12.33	□□□□□ -0.44
GGA1-222	ENST00000489772	CSDE1	O75534	798 aa	Known RBP	12.33	□□□□□ -0.44
GGA1-222	ENST00000489772	POU3F3	P20264	500 aa	Predicted RBP	12.33	□□□□□ -0.44
GGA1-222	ENST00000489772	FGFR4	P22455	802 aa		12.33	□□□□□ -0.44
GGA1-222	ENST00000489772	FAM189B	P81408	668 aa		12.33	□□□□□ -0.44
GGA1-222	ENST00000489772	ATP2C1	P98194	919 aa	Predicted RBP	12.33	□□□□□ -0.44
GGA1-222	ENST00000489772	GRB10	Q13322	594 aa		12.33	□□□□□ -0.44
GGA1-222	ENST00000489772	TFDP1	Q14186	410 aa		12.33	□□□□□ -0.44
GGA1-222	ENST00000489772	EPC2	Q52LR7	807 aa		12.33	□□□□□ -0.44
GGA1-222	ENST00000489772	KRT79	Q5XKE5	535 aa		12.33	□□□□□ -0.44
GGA1-222	ENST00000489772	CATSPER4	Q7RTX7	472 aa		12.33	□□□□□ -0.44
GGA1-222	ENST00000489772	SRGAP1	Q7Z6B7	1085 aa		12.33	□□□□□ -0.44
GGA1-222	ENST00000489772	HSCB	Q8IWL3	235 aa		12.33	□□□□□ -0.44
GGA1-222	ENST00000489772	TMEM192	Q8IY95	271 aa		12.33	□□□□□ -0.44
GGA1-222	ENST00000489772	CMTR2	Q8IYT2	770 aa	Known RBP	12.33	□□□□□ -0.44
GGA1-222	ENST00000489772	RNF149	Q8NC42	400 aa		12.33	□□□□□ -0.44
GGA1-222	ENST00000489772	SLC17A8	Q8NDX2	589 aa		12.33	□□□□□ -0.44
GGA1-222	ENST00000489772	SNX29	Q8TEQ0	813 aa		12.33	□□□□□ -0.44
GGA1-222	ENST00000489772	PPM1E	Q8WY54	764 aa		12.33	□□□□□ -0.44
GGA1-222	ENST00000489772	ELAC1	Q9H777	363 aa	Known RBP	12.33	□□□□□ -0.44
GGA1-222	ENST00000489772	IFT122	Q9HBG6	1241 aa		12.33	□□□□□ -0.44
GGA1-222	ENST00000489772	XPNPEP1	Q9NQW7	623 aa		12.33	□□□□□ -0.44
GGA1-222	ENST00000489772	TMEM161A	Q9NX61	479 aa		12.33	□□□□□ -0.44
GGA1-222	ENST00000489772	MYH9	P35579	1960 aa	Known RBP	12.33	□□□□□ -0.44
GGA1-222	ENST00000489772	ARHGEF35	A5YM69	484 aa		12.32	□□□□□ -0.44
GGA1-222	ENST00000489772	LPXN	O60711	386 aa		12.32	□□□□□ -0.44
GGA1-222	ENST00000489772	USO1	O60763	962 aa	Known RBP	12.32	□□□□□ -0.44
GGA1-222	ENST00000489772	SYT1	P21579	422 aa		12.32	□□□□□ -0.44
GGA1-222	ENST00000489772	ARL2	P36404	184 aa		12.32	□□□□□ -0.44
GGA1-222	ENST00000489772	PHKA2	P46019	1235 aa		12.32	□□□□□ -0.44
GGA1-222	ENST00000489772	IL17A	Q16552	155 aa		12.32	□□□□□ -0.44
GGA1-222	ENST00000489772	ARL6IP4	Q66PJ3	421 aa	Known RBP	12.32	□□□□□ -0.44
GGA1-222	ENST00000489772	MICALL1	Q8N3F8	863 aa		12.32	□□□□□ -0.44
GGA1-222	ENST00000489772	MCPH1	Q8NEM0	835 aa		12.32	□□□□□ -0.44
GGA1-222	ENST00000489772	GDPD5	Q8WTR4	605 aa		12.32	□□□□□ -0.44
GGA1-222	ENST00000489772	KIAA1024	Q9UPX6	916 aa		12.32	□□□□□ -0.44
GGA1-222	ENST00000489772	PIN4	Q9Y237	131 aa	Known RBP	12.32	□□□□□ -0.44
GGA1-222	ENST00000489772	MTCH2	Q9Y6C9	303 aa		12.32	□□□□□ -0.44
GGA1-222	ENST00000489772	SPTBN5	Q9NRC6	3674 aa	Known RBP	12.32	□□□□□ -0.44
GGA1-222	ENST00000489772		A0A0U1RQF3	1178 aa		12.31	□□□□□ -0.44
GGA1-222	ENST00000489772	HOXA2	O43364	376 aa		12.31	□□□□□ -0.44
GGA1-222	ENST00000489772	BMP15	O95972	392 aa		12.31	□□□□□ -0.44
GGA1-222	ENST00000489772	RB1	P06400	928 aa		12.31	□□□□□ -0.44
GGA1-222	ENST00000489772	SKI	P12755	728 aa		12.31	□□□□□ -0.44
GGA1-222	ENST00000489772	CTNNB1	P35222	781 aa		12.31	□□□□□ -0.44
GGA1-222	ENST00000489772	BMPR1A	P36894	532 aa		12.31	□□□□□ -0.44
GGA1-222	ENST00000489772	POU5F1B	Q06416	359 aa		12.31	□□□□□ -0.44
GGA1-222	ENST00000489772	NCBP1	Q09161	790 aa	Known RBP	12.31	□□□□□ -0.44
GGA1-222	ENST00000489772	PCBP1	Q15365	356 aa	Known RBP eCLIP	12.31	□□□□□ -0.44
GGA1-222	ENST00000489772	CCDC85B	Q15834	202 aa	Predicted RBP	12.31	□□□□□ -0.44
GGA1-222	ENST00000489772	PTPRO	Q16827	1216 aa		12.31	□□□□□ -0.44
GGA1-222	ENST00000489772	PAN2	Q504Q3	1202 aa	Known RBP	12.31	□□□□□ -0.44
GGA1-222	ENST00000489772	TWF2	Q6IBS0	349 aa	Known RBP	12.31	□□□□□ -0.44
GGA1-222	ENST00000489772	PADI6	Q6TGC4	694 aa		12.31	□□□□□ -0.44
GGA1-222	ENST00000489772	CLP1	Q92989	425 aa	Known RBP	12.31	□□□□□ -0.44
GGA1-222	ENST00000489772	POLR3F	Q9H1D9	316 aa	Predicted RBP	12.31	□□□□□ -0.44
GGA1-222	ENST00000489772	DDX19A	Q9NUU7	478 aa	Known RBP	12.31	□□□□□ -0.44
GGA1-222	ENST00000489772	LMCD1	Q9NZU5	365 aa		12.31	□□□□□ -0.44
GGA1-222	ENST00000489772	EYS	Q5T1H1	3165 aa		12.31	□□□□□ -0.44
GGA1-222	ENST00000489772	COL4A6	Q14031	1691 aa		12.31	□□□□□ -0.44
GGA1-222	ENST00000489772	SI	P14410	1827 aa		12.31	□□□□□ -0.44
GGA1-222	ENST00000489772	TRANK1	O15050	2925 aa		12.31	□□□□□ -0.44
GGA1-222	ENST00000489772	MICAL3	Q7RTP6	2002 aa		12.31	□□□□□ -0.44
GGA1-222	ENST00000489772	VWA3A	A6NCI4	1184 aa		12.3	□□□□□ -0.44
GGA1-222	ENST00000489772	TBKBP1	A7MCY6	615 aa		12.3	□□□□□ -0.44
GGA1-222	ENST00000489772	C5orf67	F2Z3F1	127 aa		12.3	□□□□□ -0.44
GGA1-222	ENST00000489772		H3BNC9	293 aa		12.3	□□□□□ -0.44
GGA1-222	ENST00000489772	EOMES	O95936	686 aa		12.3	□□□□□ -0.44
GGA1-222	ENST00000489772	HSP90AA1	P07900	732 aa	Known RBP	12.3	□□□□□ -0.44
GGA1-222	ENST00000489772	FGFR1	P11362	822 aa		12.3	□□□□□ -0.44
GGA1-222	ENST00000489772	CYP11B2	P19099	503 aa		12.3	□□□□□ -0.44
GGA1-222	ENST00000489772	GLRA2	P23416	452 aa		12.3	□□□□□ -0.44
GGA1-222	ENST00000489772	PTEN	P60484	403 aa		12.3	□□□□□ -0.44
GGA1-222	ENST00000489772	GPM6B	Q13491	265 aa		12.3	□□□□□ -0.44
GGA1-222	ENST00000489772	ECM1	Q16610	540 aa		12.3	□□□□□ -0.44
GGA1-222	ENST00000489772	FAM102B	Q5T8I3	360 aa		12.3	□□□□□ -0.44
GGA1-222	ENST00000489772	MAEA	Q7L5Y9	396 aa		12.3	□□□□□ -0.44
GGA1-222	ENST00000489772	ECHDC2	Q86YB7	292 aa		12.3	□□□□□ -0.44
GGA1-222	ENST00000489772	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	12.3	□□□□□ -0.44
GGA1-222	ENST00000489772	ABI1	Q8IZP0	508 aa		12.3	□□□□□ -0.44
GGA1-222	ENST00000489772	RNF169	Q8NCN4	708 aa		12.3	□□□□□ -0.44
GGA1-222	ENST00000489772	ASAP3	Q8TDY4	903 aa		12.3	□□□□□ -0.44
GGA1-222	ENST00000489772	C11orf84	Q9BUA3	381 aa	Predicted RBP	12.3	□□□□□ -0.44
GGA1-222	ENST00000489772	TRAIP	Q9BWF2	469 aa		12.3	□□□□□ -0.44
GGA1-222	ENST00000489772	PLVAP	Q9BX97	442 aa		12.3	□□□□□ -0.44
GGA1-222	ENST00000489772	BHMT2	Q9H2M3	363 aa		12.3	□□□□□ -0.44
GGA1-222	ENST00000489772	AGPAT5	Q9NUQ2	364 aa		12.3	□□□□□ -0.44
GGA1-222	ENST00000489772	DNM3	Q9UQ16	869 aa		12.3	□□□□□ -0.44
GGA1-222	ENST00000489772	MRPL42	Q9Y6G3	142 aa	Known RBP	12.3	□□□□□ -0.44
GGA1-222	ENST00000489772	PP2D1	A8MPX8	630 aa		12.3	□□□□□ -0.44
GGA1-222	ENST00000489772	INO80B-WBP1	J3KQ70	363 aa		12.3	□□□□□ -0.44
GGA1-222	ENST00000489772	ERLIN2	O94905	339 aa		12.3	□□□□□ -0.44
GGA1-222	ENST00000489772	LINC00271	P0C7V0	271 aa		12.3	□□□□□ -0.44
GGA1-222	ENST00000489772	CDC25A	P30304	524 aa		12.3	□□□□□ -0.44
GGA1-222	ENST00000489772	GATM	P50440	423 aa		12.3	□□□□□ -0.44
GGA1-222	ENST00000489772	CAPS	Q13938	189 aa		12.3	□□□□□ -0.44
GGA1-222	ENST00000489772	ZRSR1	Q15695	479 aa	Known RBP	12.3	□□□□□ -0.44
GGA1-222	ENST00000489772	SPOUT1	Q5T280	376 aa	Known RBP	12.3	□□□□□ -0.44
GGA1-222	ENST00000489772	KCTD17	Q8N5Z5	321 aa		12.3	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms