RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 PMM1Q92871 262 aa5.65□□□□□ -1.5
XRN1-213ENST00000489241 TCF7L1Q9HCS4 588 aa5.65□□□□□ -1.5
XRN1-213ENST00000489241 GALNT8Q9NY28 637 aa5.65□□□□□ -1.5
XRN1-213ENST00000489241 ARHGAP20Q9P2F6 1191 aa5.65□□□□□ -1.5
XRN1-213ENST00000489241 LUC7L2Q9Y383 392 aaKnown RBP5.65□□□□□ -1.5
XRN1-213ENST00000489241 PRAMEF22A3QJZ6 481 aa5.64□□□□□ -1.51
XRN1-213ENST00000489241 NPEPPSL1A6NEC2 478 aa5.64□□□□□ -1.51
XRN1-213ENST00000489241 PLEKHD1A6NEE1 506 aa5.64□□□□□ -1.51
XRN1-213ENST00000489241 CHGBP05060 677 aa5.64□□□□□ -1.51
XRN1-213ENST00000489241 RBP3P10745 1247 aa5.64□□□□□ -1.51
XRN1-213ENST00000489241 PTX3P26022 381 aaPredicted RBP5.64□□□□□ -1.51
XRN1-213ENST00000489241 RHBDL3P58872 404 aa5.64□□□□□ -1.51
XRN1-213ENST00000489241 PPP2CBP62714 309 aa5.64□□□□□ -1.51
XRN1-213ENST00000489241 PPP2CAP67775 309 aa5.64□□□□□ -1.51
XRN1-213ENST00000489241 PHC1P78364 1004 aa5.64□□□□□ -1.51
XRN1-213ENST00000489241 SMAD3P84022 425 aaKnown RBP5.64□□□□□ -1.51
XRN1-213ENST00000489241 ZXDAP98168 799 aa5.64□□□□□ -1.51
XRN1-213ENST00000489241 NFATC3Q12968 1075 aa5.64□□□□□ -1.51
XRN1-213ENST00000489241 SMAD2Q15796 467 aaKnown RBP5.64□□□□□ -1.51
XRN1-213ENST00000489241 CMIPQ8IY22 773 aa5.64□□□□□ -1.51
XRN1-213ENST00000489241 ZNF610Q8N9Z0 462 aa5.64□□□□□ -1.51
XRN1-213ENST00000489241 C1orf162Q8NEQ5 155 aaPredicted RBP5.64□□□□□ -1.51
XRN1-213ENST00000489241 FAXDC2Q96IV6 333 aa5.64□□□□□ -1.51
XRN1-213ENST00000489241 C16orf92Q96LL3 132 aa5.64□□□□□ -1.51
XRN1-213ENST00000489241 ARNT2Q9HBZ2 717 aa5.64□□□□□ -1.51
XRN1-213ENST00000489241 INCENPQ9NQS7 918 aa5.64□□□□□ -1.51
XRN1-213ENST00000489241 TOPORSQ9NS56 1045 aaPredicted RBP5.64□□□□□ -1.51
XRN1-213ENST00000489241 UCKL1Q9NWZ5 548 aa5.64□□□□□ -1.51
XRN1-213ENST00000489241 BTBD7Q9P203 1132 aa5.64□□□□□ -1.51
XRN1-213ENST00000489241 KCNG1Q9UIX4 513 aa5.64□□□□□ -1.51
XRN1-213ENST00000489241 ADAM29Q9UKF5 820 aa5.64□□□□□ -1.51
XRN1-213ENST00000489241 NOC2LQ9Y3T9 749 aaKnown RBP5.64□□□□□ -1.51
XRN1-213ENST00000489241 UBA6A0AVT1 1052 aaPredicted RBP5.63□□□□□ -1.51
XRN1-213ENST00000489241 RASSF10A6NK89 507 aa5.63□□□□□ -1.51
XRN1-213ENST00000489241 GPR42O15529 346 aa5.63□□□□□ -1.51
XRN1-213ENST00000489241 SNUPNO95149 360 aaKnown RBP5.63□□□□□ -1.51
XRN1-213ENST00000489241 CCND1P24385 295 aa5.63□□□□□ -1.51
XRN1-213ENST00000489241 GLRBP48167 497 aa5.63□□□□□ -1.51
XRN1-213ENST00000489241 ALDH6A1Q02252 535 aaKnown RBP5.63□□□□□ -1.51
XRN1-213ENST00000489241 TCIRG1Q13488 830 aa5.63□□□□□ -1.51
XRN1-213ENST00000489241 ICAM4Q14773 271 aa5.63□□□□□ -1.51
XRN1-213ENST00000489241 TTC38Q5R3I4 469 aa5.63□□□□□ -1.51
XRN1-213ENST00000489241 SLFN13Q68D06 897 aa5.63□□□□□ -1.51
XRN1-213ENST00000489241 TIGD7Q6NT04 549 aaPredicted RBP5.63□□□□□ -1.51
XRN1-213ENST00000489241 RASSF3Q86WH2 238 aa5.63□□□□□ -1.51
XRN1-213ENST00000489241 PHYKPLQ8IUZ5 450 aa5.63□□□□□ -1.51
XRN1-213ENST00000489241 TPH2Q8IWU9 490 aa5.63□□□□□ -1.51
XRN1-213ENST00000489241 CPA6Q8N4T0 437 aa5.63□□□□□ -1.51
XRN1-213ENST00000489241 NUDT10Q8NFP7 164 aa5.63□□□□□ -1.51
XRN1-213ENST00000489241 NUDT11Q96G61 164 aa5.63□□□□□ -1.51
XRN1-213ENST00000489241 TUBGCP5Q96RT8 1024 aa5.63□□□□□ -1.51
XRN1-213ENST00000489241 CDK5RAP1Q96SZ6 601 aaKnown RBP5.63□□□□□ -1.51
XRN1-213ENST00000489241 PSMD1Q99460 953 aa5.63□□□□□ -1.51
XRN1-213ENST00000489241 BTBD2Q9BX70 525 aa5.63□□□□□ -1.51
XRN1-213ENST00000489241 PCGF6Q9BYE7 350 aa5.63□□□□□ -1.51
XRN1-213ENST00000489241 MS4A5Q9H3V2 200 aa5.63□□□□□ -1.51
XRN1-213ENST00000489241 JADE2Q9NQC1 790 aa5.63□□□□□ -1.51
XRN1-213ENST00000489241 USP36Q9P275 1121 aaKnown RBP5.63□□□□□ -1.51
XRN1-213ENST00000489241 TSC22D4Q9Y3Q8 395 aa5.63□□□□□ -1.51
XRN1-213ENST00000489241 WASHC2AQ641Q2 1341 aa5.63□□□□□ -1.51
XRN1-213ENST00000489241 LOC102724159A0A0B4J2E5 919 aa5.62□□□□□ -1.51
XRN1-213ENST00000489241 GOLGA6CA6NDK9 693 aa5.62□□□□□ -1.51
XRN1-213ENST00000489241 GOLGA6BA6NDN3 693 aa5.62□□□□□ -1.51
XRN1-213ENST00000489241 MAFGO15525 162 aa5.62□□□□□ -1.51
XRN1-213ENST00000489241 PCDHGA12O60330 932 aa5.62□□□□□ -1.51
XRN1-213ENST00000489241 KLHL18O94889 574 aa5.62□□□□□ -1.51
XRN1-213ENST00000489241 KRT18P05783 430 aaKnown RBP5.62□□□□□ -1.51
XRN1-213ENST00000489241 GOLGA6DP0CG33 693 aa5.62□□□□□ -1.51
XRN1-213ENST00000489241 ECE1P42892 770 aa5.62□□□□□ -1.51
XRN1-213ENST00000489241 RECQLP46063 649 aaPredicted RBP5.62□□□□□ -1.51
XRN1-213ENST00000489241 SCAND1P57086 179 aa5.62□□□□□ -1.51
XRN1-213ENST00000489241 KRT85P78386 507 aa5.62□□□□□ -1.51
XRN1-213ENST00000489241 ROM1Q03395 351 aa5.62□□□□□ -1.51
XRN1-213ENST00000489241 UBE4AQ14139 1066 aa5.62□□□□□ -1.51
XRN1-213ENST00000489241 HLTFQ14527 1009 aaKnown RBP eCLIP5.62□□□□□ -1.51
XRN1-213ENST00000489241 ODF1Q14990 250 aa5.62□□□□□ -1.51
XRN1-213ENST00000489241 PWP2Q15269 919 aaKnown RBP5.62□□□□□ -1.51
XRN1-213ENST00000489241 TMEM240Q5SV17 173 aa5.62□□□□□ -1.51
XRN1-213ENST00000489241 CXorf57Q6NSI4 855 aaKnown RBP5.62□□□□□ -1.51
XRN1-213ENST00000489241 PGM2L1Q6PCE3 622 aa5.62□□□□□ -1.51
XRN1-213ENST00000489241 FRMD7Q6ZUT3 714 aa5.62□□□□□ -1.51
XRN1-213ENST00000489241 CXXC5Q7LFL8 322 aaKnown RBP5.62□□□□□ -1.51
XRN1-213ENST00000489241 RALYLQ86SE5 291 aaKnown RBP5.62□□□□□ -1.51
XRN1-213ENST00000489241 DNERQ8NFT8 737 aa5.62□□□□□ -1.51
XRN1-213ENST00000489241 FOXRED1Q96CU9 486 aaPredicted RBP5.62□□□□□ -1.51
XRN1-213ENST00000489241 MAML3Q96JK9 1138 aa5.62□□□□□ -1.51
XRN1-213ENST00000489241 FOXB1Q99853 325 aa5.62□□□□□ -1.51
XRN1-213ENST00000489241 MEGF9Q9H1U4 602 aa5.62□□□□□ -1.51
XRN1-213ENST00000489241 CD248Q9HCU0 757 aa5.62□□□□□ -1.51
XRN1-213ENST00000489241 GOLGA6AQ9NYA3 693 aa5.62□□□□□ -1.51
XRN1-213ENST00000489241 ZFP69BQ9UJL9 534 aa5.62□□□□□ -1.51
XRN1-213ENST00000489241 ANKRD6Q9Y2G4 727 aa5.62□□□□□ -1.51
XRN1-213ENST00000489241 PCDHGA9Q9Y5G4 932 aaKnown RBP5.62□□□□□ -1.51
XRN1-213ENST00000489241 PCDHGA8Q9Y5G5 932 aa5.62□□□□□ -1.51
XRN1-213ENST00000489241 PCDHGA7Q9Y5G6 932 aa5.62□□□□□ -1.51
XRN1-213ENST00000489241 PCDHGA6Q9Y5G7 932 aa5.62□□□□□ -1.51
XRN1-213ENST00000489241 PCDHGA3Q9Y5H0 932 aa5.62□□□□□ -1.51
XRN1-213ENST00000489241 PCDHGA2Q9Y5H1 932 aa5.62□□□□□ -1.51
XRN1-213ENST00000489241 TRIM75PA6NK02 468 aa5.61□□□□□ -1.51
XRN1-213ENST00000489241 B4GALT4O60513 344 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms