RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 PSPC1Q8WXF1 523 aaKnown RBP11.01□□□□□ -0.65
USP11-211ENST00000489111 BSNDQ8WZ55 320 aa11.01□□□□□ -0.65
USP11-211ENST00000489111 EEF2KMTQ96G04 330 aa11.01□□□□□ -0.65
USP11-211ENST00000489111 CEP89Q96ST8 783 aa11.01□□□□□ -0.65
USP11-211ENST00000489111 KIFC3Q9BVG8 833 aa11.01□□□□□ -0.65
USP11-211ENST00000489111 RNPEPQ9H4A4 650 aa11.01□□□□□ -0.65
USP11-211ENST00000489111 SUGCTQ9HAC7 445 aa11.01□□□□□ -0.65
USP11-211ENST00000489111 CGNQ9P2M7 1197 aaKnown RBP11.01□□□□□ -0.65
USP11-211ENST00000489111 ZMYM2Q9UBW7 1377 aa11.01□□□□□ -0.65
USP11-211ENST00000489111 A0A1B0GTH6 734 aa11□□□□□ -0.65
USP11-211ENST00000489111 SLC16A3O15427 465 aaKnown RBP11□□□□□ -0.65
USP11-211ENST00000489111 MAGEB2O15479 319 aa11□□□□□ -0.65
USP11-211ENST00000489111 ZEB2O60315 1214 aa11□□□□□ -0.65
USP11-211ENST00000489111 KPNA6O60684 536 aa11□□□□□ -0.65
USP11-211ENST00000489111 C22orf31O95567 290 aa11□□□□□ -0.65
USP11-211ENST00000489111 F2P00734 622 aa11□□□□□ -0.65
USP11-211ENST00000489111 C6orf222P0C671 652 aaPredicted RBP11□□□□□ -0.65
USP11-211ENST00000489111 EPB41P11171 864 aaKnown RBP11□□□□□ -0.65
USP11-211ENST00000489111 ARL2P36404 184 aa11□□□□□ -0.65
USP11-211ENST00000489111 PRMT2P55345 433 aa11□□□□□ -0.65
USP11-211ENST00000489111 GTF2BQ00403 316 aa11□□□□□ -0.65
USP11-211ENST00000489111 CACNB2Q08289 660 aaPredicted RBP11□□□□□ -0.65
USP11-211ENST00000489111 KCNA1Q09470 495 aa11□□□□□ -0.65
USP11-211ENST00000489111 STRN3Q13033 797 aa11□□□□□ -0.65
USP11-211ENST00000489111 ADAM9Q13443 819 aa11□□□□□ -0.65
USP11-211ENST00000489111 TFDP1Q14186 410 aa11□□□□□ -0.65
USP11-211ENST00000489111 MXD4Q14582 209 aaPredicted RBP11□□□□□ -0.65
USP11-211ENST00000489111 MFSD10Q14728 455 aa11□□□□□ -0.65
USP11-211ENST00000489111 GRIK4Q16099 956 aa11□□□□□ -0.65
USP11-211ENST00000489111 TMC6Q7Z403 805 aa11□□□□□ -0.65
USP11-211ENST00000489111 IRF2BP1Q8IU81 584 aa11□□□□□ -0.65
USP11-211ENST00000489111 MAP4K3Q8IVH8 894 aa11□□□□□ -0.65
USP11-211ENST00000489111 KSR1Q8IVT5 923 aa11□□□□□ -0.65
USP11-211ENST00000489111 LRRC71Q8N4P6 559 aa11□□□□□ -0.65
USP11-211ENST00000489111 ZNF296Q8WUU4 475 aaPredicted RBP11□□□□□ -0.65
USP11-211ENST00000489111 BICD1Q96G01 975 aa11□□□□□ -0.65
USP11-211ENST00000489111 NAP1L5Q96NT1 182 aaPredicted RBP11□□□□□ -0.65
USP11-211ENST00000489111 TUBGCP2Q9BSJ2 902 aa11□□□□□ -0.65
USP11-211ENST00000489111 KATNAL1Q9BW62 490 aa11□□□□□ -0.65
USP11-211ENST00000489111 STRA6Q9BX79 667 aa11□□□□□ -0.65
USP11-211ENST00000489111 VPS16Q9H269 839 aa11□□□□□ -0.65
USP11-211ENST00000489111 AGPAT3Q9NRZ7 376 aa11□□□□□ -0.65
USP11-211ENST00000489111 SUCLA2Q9P2R7 463 aaPredicted RBP11□□□□□ -0.65
USP11-211ENST00000489111 TBX20Q9UMR3 447 aa11□□□□□ -0.65
USP11-211ENST00000489111 PLXNA1Q9UIW2 1896 aa11□□□□□ -0.65
USP11-211ENST00000489111 IGKV6-21A0A0C4DH24 114 aa10.99□□□□□ -0.65
USP11-211ENST00000489111 RRN3P2A6NIE6 340 aa10.99□□□□□ -0.65
USP11-211ENST00000489111 LGALS16A8MUM7 142 aa10.99□□□□□ -0.65
USP11-211ENST00000489111 CLIC2O15247 247 aa10.99□□□□□ -0.65
USP11-211ENST00000489111 TGFB1I1O43294 461 aa10.99□□□□□ -0.65
USP11-211ENST00000489111 GLRA2P23416 452 aa10.99□□□□□ -0.65
USP11-211ENST00000489111 TMOD1P28289 359 aa10.99□□□□□ -0.65
USP11-211ENST00000489111 CYP2J2P51589 502 aa10.99□□□□□ -0.65
USP11-211ENST00000489111 CLCN3P51790 818 aa10.99□□□□□ -0.65
USP11-211ENST00000489111 EFNA5P52803 228 aa10.99□□□□□ -0.65
USP11-211ENST00000489111 SNRPFP62306 86 aaKnown RBP10.99□□□□□ -0.65
USP11-211ENST00000489111 BEX3Q00994 111 aa10.99□□□□□ -0.65
USP11-211ENST00000489111 CAP1Q01518 475 aa10.99□□□□□ -0.65
USP11-211ENST00000489111 TRIM32Q13049 653 aa10.99□□□□□ -0.65
USP11-211ENST00000489111 NFIL3Q16649 462 aa10.99□□□□□ -0.65
USP11-211ENST00000489111 KIAA0753Q2KHM9 967 aa10.99□□□□□ -0.65
USP11-211ENST00000489111 FKBP15Q5T1M5 1219 aa10.99□□□□□ -0.65
USP11-211ENST00000489111 CEP135Q66GS9 1140 aa10.99□□□□□ -0.65
USP11-211ENST00000489111 EFCAB12Q6NXP0 572 aa10.99□□□□□ -0.65
USP11-211ENST00000489111 APTXQ7Z2E3 356 aaKnown RBP10.99□□□□□ -0.65
USP11-211ENST00000489111 FILIP1Q7Z7B0 1213 aa10.99□□□□□ -0.65
USP11-211ENST00000489111 VSTM4Q8IW00 320 aa10.99□□□□□ -0.65
USP11-211ENST00000489111 ZBTB8OSQ8IWT0 167 aa10.99□□□□□ -0.65
USP11-211ENST00000489111 ZC3H3Q8IXZ2 948 aaKnown RBP10.99□□□□□ -0.65
USP11-211ENST00000489111 SLAIN1Q8ND83 568 aa10.99□□□□□ -0.65
USP11-211ENST00000489111 PRPF31Q8WWY3 499 aaKnown RBP10.99□□□□□ -0.65
USP11-211ENST00000489111 MAP7D2Q96T17 732 aa10.99□□□□□ -0.65
USP11-211ENST00000489111 NTPCRQ9BSD7 190 aaKnown RBP10.99□□□□□ -0.65
USP11-211ENST00000489111 NOC4LQ9BVI4 516 aaKnown RBP10.99□□□□□ -0.65
USP11-211ENST00000489111 C2orf40Q9H1Z8 148 aa10.99□□□□□ -0.65
USP11-211ENST00000489111 RTN4Q9NQC3 1192 aaKnown RBP10.99□□□□□ -0.65
USP11-211ENST00000489111 ARHGAP28Q9P2N2 729 aa10.99□□□□□ -0.65
USP11-211ENST00000489111 FRMD4BQ9Y2L6 1034 aa10.99□□□□□ -0.65
USP11-211ENST00000489111 PHLPP2Q6ZVD8 1323 aa10.99□□□□□ -0.65
USP11-211ENST00000489111 KIAA1217Q5T5P2 1943 aa10.99□□□□□ -0.65
USP11-211ENST00000489111 LRRC10BA6NIK2 292 aa10.98□□□□□ -0.65
USP11-211ENST00000489111 HNRNPDLO14979 420 aaKnown RBP10.98□□□□□ -0.65
USP11-211ENST00000489111 SMIM10L2AP0DMW4 78 aa10.98□□□□□ -0.65
USP11-211ENST00000489111 SMIM10L2BP0DMW5 78 aa10.98□□□□□ -0.65
USP11-211ENST00000489111 HSPA6P17066 643 aa10.98□□□□□ -0.65
USP11-211ENST00000489111 KLRC1P26715 233 aa10.98□□□□□ -0.65
USP11-211ENST00000489111 PSEN2P49810 448 aa10.98□□□□□ -0.65
USP11-211ENST00000489111 GSDMDP57764 484 aa10.98□□□□□ -0.65
USP11-211ENST00000489111 GJA9P57773 515 aa10.98□□□□□ -0.65
USP11-211ENST00000489111 UBXN1Q04323 297 aa10.98□□□□□ -0.65
USP11-211ENST00000489111 LAMTOR4Q0VGL1 99 aa10.98□□□□□ -0.65
USP11-211ENST00000489111 CAPSQ13938 189 aa10.98□□□□□ -0.65
USP11-211ENST00000489111 HSP90AA2PQ14568 343 aaPredicted RBP10.98□□□□□ -0.65
USP11-211ENST00000489111 MAN2A1Q16706 1144 aa10.98□□□□□ -0.65
USP11-211ENST00000489111 GNASQ5JWF2 1037 aa10.98□□□□□ -0.65
USP11-211ENST00000489111 SPECC1LQ69YQ0 1117 aa10.98□□□□□ -0.65
USP11-211ENST00000489111 ARMCX5Q6P1M9 558 aa10.98□□□□□ -0.65
USP11-211ENST00000489111 RHPN2Q8IUC4 686 aa10.98□□□□□ -0.65
USP11-211ENST00000489111 PXYLP1Q8TE99 480 aa10.98□□□□□ -0.65
USP11-211ENST00000489111 NLRP4Q96MN2 994 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms