RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 ECHDC2Q86YB7 292 aa19.81■□□□□ 0.76
ITGB1-215ENST00000488494 ELAC1Q9H777 363 aaKnown RBP19.81■□□□□ 0.76
ITGB1-215ENST00000488494 KIF3AQ9Y496 699 aa19.81■□□□□ 0.76
ITGB1-215ENST00000488494 GAS2O43903 313 aaKnown RBP19.8■□□□□ 0.76
ITGB1-215ENST00000488494 TRAPPC10P48553 1259 aa19.8■□□□□ 0.76
ITGB1-215ENST00000488494 SPOUT1Q5T280 376 aaKnown RBP19.8■□□□□ 0.76
ITGB1-215ENST00000488494 ADAMTS19Q8TE59 1207 aa19.8■□□□□ 0.76
ITGB1-215ENST00000488494 PRPF31Q8WWY3 499 aaKnown RBP19.8■□□□□ 0.76
ITGB1-215ENST00000488494 MTRQ99707 1265 aa19.8■□□□□ 0.76
ITGB1-215ENST00000488494 LMAN2LQ9H0V9 348 aa19.8■□□□□ 0.76
ITGB1-215ENST00000488494 ALG13Q9NP73 1137 aaKnown RBP19.8■□□□□ 0.76
ITGB1-215ENST00000488494 PIN4Q9Y237 131 aaKnown RBP19.8■□□□□ 0.76
ITGB1-215ENST00000488494 HOXA2O43364 376 aa19.79■□□□□ 0.76
ITGB1-215ENST00000488494 U2AF2P26368 475 aaKnown RBP eCLIP19.79■□□□□ 0.76
ITGB1-215ENST00000488494 TECP42680 631 aa19.79■□□□□ 0.76
ITGB1-215ENST00000488494 LAMTOR4Q0VGL1 99 aa19.79■□□□□ 0.76
ITGB1-215ENST00000488494 TCEAL5Q5H9L2 206 aa19.79■□□□□ 0.76
ITGB1-215ENST00000488494 CATSPER4Q7RTX7 472 aa19.79■□□□□ 0.76
ITGB1-215ENST00000488494 TCP11Q8WWU5 503 aa19.79■□□□□ 0.76
ITGB1-215ENST00000488494 P2RX5Q93086 422 aa19.79■□□□□ 0.76
ITGB1-215ENST00000488494 INO80BQ9C086 356 aaPredicted RBP19.79■□□□□ 0.76
ITGB1-215ENST00000488494 NSUN3Q9H649 340 aaKnown RBP19.79■□□□□ 0.76
ITGB1-215ENST00000488494 IFT122Q9HBG6 1241 aa19.79■□□□□ 0.76
ITGB1-215ENST00000488494 XPNPEP1Q9NQW7 623 aa19.79■□□□□ 0.76
ITGB1-215ENST00000488494 ANKEF1Q9NU02 776 aa19.79■□□□□ 0.76
ITGB1-215ENST00000488494 RNF19AQ9NV58 838 aa19.79■□□□□ 0.76
ITGB1-215ENST00000488494 DACT1Q9NYF0 836 aa19.79■□□□□ 0.76
ITGB1-215ENST00000488494 ITGB1P05556 798 aa19.78■□□□□ 0.76
ITGB1-215ENST00000488494 SRGAP2CP0DJJ0 459 aa19.78■□□□□ 0.76
ITGB1-215ENST00000488494 ATF7P17544 494 aaPredicted RBP19.78■□□□□ 0.76
ITGB1-215ENST00000488494 MCM2P49736 904 aa19.78■□□□□ 0.76
ITGB1-215ENST00000488494 RARRES1P49788 294 aa19.78■□□□□ 0.76
ITGB1-215ENST00000488494 TWF2Q6IBS0 349 aaKnown RBP19.78■□□□□ 0.76
ITGB1-215ENST00000488494 FERMT3Q86UX7 667 aa19.78■□□□□ 0.76
ITGB1-215ENST00000488494 ABI1Q8IZP0 508 aa19.78■□□□□ 0.76
ITGB1-215ENST00000488494 KLHL23Q8NBE8 558 aa19.78■□□□□ 0.76
ITGB1-215ENST00000488494 PIGOQ8TEQ8 1089 aa19.78■□□□□ 0.76
ITGB1-215ENST00000488494 TMEM117Q9H0C3 514 aa19.78■□□□□ 0.76
ITGB1-215ENST00000488494 UBE2ZQ9H832 354 aaPredicted RBP19.78■□□□□ 0.76
ITGB1-215ENST00000488494 PLAGL2Q9UPG8 496 aa19.78■□□□□ 0.76
ITGB1-215ENST00000488494 A0A087WWV3 80 aa19.77■□□□□ 0.76
ITGB1-215ENST00000488494 A0A0U1RQF3 1178 aa19.77■□□□□ 0.76
ITGB1-215ENST00000488494 MED24O75448 989 aa19.77■□□□□ 0.76
ITGB1-215ENST00000488494 SPATA31C1P0DKV0 1188 aa19.77■□□□□ 0.76
ITGB1-215ENST00000488494 GJB2P29033 226 aa19.77■□□□□ 0.76
ITGB1-215ENST00000488494 NAALADL2Q58DX5 795 aa19.77■□□□□ 0.76
ITGB1-215ENST00000488494 CLLU1OSQ5K130 101 aa19.77■□□□□ 0.76
ITGB1-215ENST00000488494 MCTP1Q6DN14 999 aa19.77■□□□□ 0.76
ITGB1-215ENST00000488494 POTEGQ6S5H5 508 aa19.77■□□□□ 0.76
ITGB1-215ENST00000488494 ZNF598Q86UK7 904 aaKnown RBP19.77■□□□□ 0.76
ITGB1-215ENST00000488494 LRRC43Q8N309 656 aa19.77■□□□□ 0.76
ITGB1-215ENST00000488494 RNF149Q8NC42 400 aa19.77■□□□□ 0.76
ITGB1-215ENST00000488494 ERMNQ8TAM6 284 aa19.77■□□□□ 0.76
ITGB1-215ENST00000488494 CASD1Q96PB1 797 aa19.77■□□□□ 0.76
ITGB1-215ENST00000488494 MINDY3Q9H8M7 445 aa19.77■□□□□ 0.76
ITGB1-215ENST00000488494 TUFT1Q9NNX1 390 aa19.77■□□□□ 0.76
ITGB1-215ENST00000488494 CHST12Q9NRB3 414 aa19.77■□□□□ 0.76
ITGB1-215ENST00000488494 AGPAT5Q9NUQ2 364 aa19.77■□□□□ 0.76
ITGB1-215ENST00000488494 TYW1Q9NV66 732 aaKnown RBP19.77■□□□□ 0.76
ITGB1-215ENST00000488494 MUC3AQ02505 3323 aa19.76■□□□□ 0.75
ITGB1-215ENST00000488494 PLXNA4Q9HCM2 1894 aa19.76■□□□□ 0.75
ITGB1-215ENST00000488494 USO1O60763 962 aaKnown RBP19.76■□□□□ 0.75
ITGB1-215ENST00000488494 DGAT1O75907 488 aa19.76■□□□□ 0.75
ITGB1-215ENST00000488494 LAG3P18627 525 aa19.76■□□□□ 0.75
ITGB1-215ENST00000488494 KCNA5P22460 613 aa19.76■□□□□ 0.75
ITGB1-215ENST00000488494 DNAJB1P25685 340 aa19.76■□□□□ 0.75
ITGB1-215ENST00000488494 PHKA2P46019 1235 aa19.76■□□□□ 0.75
ITGB1-215ENST00000488494 TOB1P50616 345 aaPredicted RBP19.76■□□□□ 0.75
ITGB1-215ENST00000488494 CATSPER3Q86XQ3 398 aa19.76■□□□□ 0.75
ITGB1-215ENST00000488494 COLGALT1Q8NBJ5 622 aa19.76■□□□□ 0.75
ITGB1-215ENST00000488494 CWH43Q9H720 699 aa19.76■□□□□ 0.75
ITGB1-215ENST00000488494 AAASQ9NRG9 546 aa19.76■□□□□ 0.75
ITGB1-215ENST00000488494 PCDHB6Q9Y5E3 794 aa19.76■□□□□ 0.75
ITGB1-215ENST00000488494 PCDHB12Q9Y5F1 795 aa19.76■□□□□ 0.75
ITGB1-215ENST00000488494 BDP1A6H8Y1 2624 aa19.75■□□□□ 0.75
ITGB1-215ENST00000488494 BMP1P13497 986 aa19.75■□□□□ 0.75
ITGB1-215ENST00000488494 CAMK1Q14012 370 aa19.75■□□□□ 0.75
ITGB1-215ENST00000488494 SRGAP1Q7Z6B7 1085 aa19.75■□□□□ 0.75
ITGB1-215ENST00000488494 THNSL1Q8IYQ7 743 aa19.75■□□□□ 0.75
ITGB1-215ENST00000488494 C4orf32Q8N8J7 132 aa19.75■□□□□ 0.75
ITGB1-215ENST00000488494 HELQQ8TDG4 1101 aa19.75■□□□□ 0.75
ITGB1-215ENST00000488494 ASAP3Q8TDY4 903 aa19.75■□□□□ 0.75
ITGB1-215ENST00000488494 NECAB3Q96P71 396 aaPredicted RBP19.75■□□□□ 0.75
ITGB1-215ENST00000488494 UHRF1Q96T88 793 aaPredicted RBP19.75■□□□□ 0.75
ITGB1-215ENST00000488494 POLR3CQ9BUI4 534 aaPredicted RBP19.75■□□□□ 0.75
ITGB1-215ENST00000488494 BRWD1Q9NSI6 2320 aa19.75■□□□□ 0.75
ITGB1-215ENST00000488494 ASAP2O43150 1006 aa19.74■□□□□ 0.75
ITGB1-215ENST00000488494 EOMESO95936 686 aa19.74■□□□□ 0.75
ITGB1-215ENST00000488494 RAB27AP51159 221 aa19.74■□□□□ 0.75
ITGB1-215ENST00000488494 CAPSQ13938 189 aa19.74■□□□□ 0.75
ITGB1-215ENST00000488494 MXD4Q14582 209 aaPredicted RBP19.74■□□□□ 0.75
ITGB1-215ENST00000488494 LONRF3Q496Y0 759 aa19.74■□□□□ 0.75
ITGB1-215ENST00000488494 HAUS3Q68CZ6 603 aa19.74■□□□□ 0.75
ITGB1-215ENST00000488494 LRRC55Q6ZSA7 311 aa19.74■□□□□ 0.75
ITGB1-215ENST00000488494 SPPL3Q8TCT6 385 aa19.74■□□□□ 0.75
ITGB1-215ENST00000488494 POF1BQ8WVV4 589 aa19.74■□□□□ 0.75
ITGB1-215ENST00000488494 LPPQ93052 612 aa19.74■□□□□ 0.75
ITGB1-215ENST00000488494 TRAIPQ9BWF2 469 aa19.74■□□□□ 0.75
ITGB1-215ENST00000488494 POLR3FQ9H1D9 316 aaPredicted RBP19.74■□□□□ 0.75
ITGB1-215ENST00000488494 FAM105AQ9NUU6 356 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms